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The map label for this gene is iscR [H]

Identifier: 92114964

GI number: 92114964

Start: 3178734

End: 3179270

Strand: Direct

Name: iscR [H]

Synonym: Csal_2847

Alternate gene names: 92114964

Gene position: 3178734-3179270 (Clockwise)

Preceding gene: 92114963

Following gene: 92114965

Centisome position: 85.99

GC content: 64.99

Gene sequence:

>537_bases
ATGCTCCGCCTGGTCAACCGCTCTTTCACCGCTGCCCGACCGACTCGACTTATGCGCTTGACGACCAAGGGACGCTACGC
CGTCACCGCGATGCTGGACCTGGCGTTGCATGCCGATGCCGGCCCCATCAGCCTCGCCGACATCTCGAAACGCCAGGCGA
TTTCGCTGTCCTATCTGGAACAGCTGTTCGCCAGGCTCAAGCGCGCCGCGCTGGTCAAGAGCGTGCGCGGCCCCGGTGGA
GGCTATCTGCTGGCCCACGGCGCGAACGCCATTTCGGTGGCCTCGGTGATCGGCGCGGTGGACGAGTCGGTGGACGCCAC
GCGTTGCCAGGGGCTGTCGGATTGCCAGCAGGGCGATACCTGCCTGACACACCACTTGTGGTGCGACCTGTCAGACAAGA
TTCACGGCTTTCTCGACGCCATCACGCTCGCCGAGCTGGTCGAGCGTCAGGAAGTCCGCGATATCGCCGCGCGCCAGCAT
CAGCGCGTGGCAACGGACACGATCAGTACCGATACCATCAGCATCGCCCCGCAGTGA

Upstream 100 bases:

>100_bases
TCTGGCGGCACGCAAAGACGGCGACGGGAATGGTTGACCGCGTTACTGGGTTTTCCCATAATGCGATCACGCTTCAGGCG
ACGGGTCCCCCACGGATCGC

Downstream 100 bases:

>100_bases
CCCTGCGTGGCGACAGGCGCCAGCGCCATCAGCGATACGAGCCGTCATGACCTCACCCGTGTACCTCGATTATGCCGCCA
CCACGCCCGTCGACCCGCGG

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MLRLVNRSFTAARPTRLMRLTTKGRYAVTAMLDLALHADAGPISLADISKRQAISLSYLEQLFARLKRAALVKSVRGPGG
GYLLAHGANAISVASVIGAVDESVDATRCQGLSDCQQGDTCLTHHLWCDLSDKIHGFLDAITLAELVERQEVRDIAARQH
QRVATDTISTDTISIAPQ

Sequences:

>Translated_178_residues
MLRLVNRSFTAARPTRLMRLTTKGRYAVTAMLDLALHADAGPISLADISKRQAISLSYLEQLFARLKRAALVKSVRGPGG
GYLLAHGANAISVASVIGAVDESVDATRCQGLSDCQQGDTCLTHHLWCDLSDKIHGFLDAITLAELVERQEVRDIAARQH
QRVATDTISTDTISIAPQ
>Mature_178_residues
MLRLVNRSFTAARPTRLMRLTTKGRYAVTAMLDLALHADAGPISLADISKRQAISLSYLEQLFARLKRAALVKSVRGPGG
GYLLAHGANAISVASVIGAVDESVDATRCQGLSDCQQGDTCLTHHLWCDLSDKIHGFLDAITLAELVERQEVRDIAARQH
QRVATDTISTDTISIAPQ

Specific function: Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins [H]

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=158, Percent_Identity=65.8227848101266, Blast_Score=195, Evalue=2e-51,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010242
- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 19264; Mature: 19264

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRLVNRSFTAARPTRLMRLTTKGRYAVTAMLDLALHADAGPISLADISKRQAISLSYLE
CCEECCCCCCCCCCHHEEEEECCCCCHHHHHHHHHHCCCCCCEEHHHCCHHHHHHHHHHH
QLFARLKRAALVKSVRGPGGGYLLAHGANAISVASVIGAVDESVDATRCQGLSDCQQGDT
HHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCCHHHHCCCCHHHCCCH
CLTHHLWCDLSDKIHGFLDAITLAELVERQEVRDIAARQHQRVATDTISTDTISIAPQ
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC
>Mature Secondary Structure
MLRLVNRSFTAARPTRLMRLTTKGRYAVTAMLDLALHADAGPISLADISKRQAISLSYLE
CCEECCCCCCCCCCHHEEEEECCCCCHHHHHHHHHHCCCCCCEEHHHCCHHHHHHHHHHH
QLFARLKRAALVKSVRGPGGGYLLAHGANAISVASVIGAVDESVDATRCQGLSDCQQGDT
HHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCCHHHHCCCCHHHCCCH
CLTHHLWCDLSDKIHGFLDAITLAELVERQEVRDIAARQHQRVATDTISTDTISIAPQ
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14528314 [H]