| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is aaeB [H]
Identifier: 92114800
GI number: 92114800
Start: 3003534
End: 3005609
Strand: Direct
Name: aaeB [H]
Synonym: Csal_2682
Alternate gene names: 92114800
Gene position: 3003534-3005609 (Clockwise)
Preceding gene: 92114799
Following gene: 92114801
Centisome position: 81.25
GC content: 67.34
Gene sequence:
>2076_bases ATGTCGTCGACGACACGGACGCAGACTGAGCCGCCCATGTCGCCCTGGATCGAGACCTACCTGACGCCCTCGAAGACATC GCTGCAGTTCGCCGCCAAGACCACCCTGGCGATGCTGCTGGCGCTGTACATCGCCTTGTGGTGCGATCTCGACCGCCCCT ACTGGGCGCTGATCTCGGCGGCGTTCCTGCAGATCCGGCCGATGAGCGGCATGGTGGTCGAAAAGGGCATCTGCCAGATC GGCGGCACCCTCATCGGCGCGCTGGCCGGCATCGTCATCATGGCCTTCTTCGCCCAGGCCCGCGTGCCCGCGCTGATCGC GCTGACCCTGTGGATCATGCTCTGCGCCTATGGCAGTTCGCTGCTGCGCAACAACTTCTCCTACGGCTGCATCATGGGCG CCGTGACCGCGATGCTGATCGTGGTGATTTCCGCCAACCAGCCCCCGAGCGGCATCTTCGACATCGCCGTGGCGCGGCTC TCCGAACTCGGTCTCGGGGCGCTCTGCGCCACCCTGGTCAGCGCCCTGCTGTGGCCCACGCACGTCAAGGAGCATCTCGC CGGGCAGGCCGACGAGGTCATCAACCAGGCCTTCACGCATGCCGGACAGCGGCTGGACGCCAGCGATGACGCTGCCGCCA TGCAGCAGTCGCTGACCGCCAGCCTCGAGCCGCTGACCATGCTCGAGACCGATAGCCAGGCGGCGCGCTACGAAGGCCCC GACGGCAACGGGCGCATCCGCGCCACCCACGTGCTGACGCGGCGTACCCTACGTTTCTTCGCCACGCTGGGGGCGCTGCA TCAGCTACTCCACGATCATCGCGATCGCATCAACGCGCCCCTGCAGCAGCTCGCCACCGAAATCGCCGAAGGCTTTCGCG GCGCCGAGCACGTCAAGGGCGTCCCCGCGGCCCGCCGTGAACTGCAGGCGCTGCGCAAGCGCGCCCATGGCTACTCCGAC ACGCAGCTCGATCCGCTGCAGCGGCGCGTCATCCTGGCGCTCCGTGAGGTGCTCGGCCACGCCATGATCATGCTCGACGC CCGCGAGGCCATCGCCCACCCGGGGCGTAAACAGCTACGCGCCGGCTCCCTGTCCTGGCATCGCGATCATCTGGTGGCGC TGCTCAACGCCGGCCGCGCGGGGCTGGTCTTCTCGTGCCTGGCGGTGTTCTGGCTGCAGACCCACTGGAGCAACGGCCAG GTGGCCATGCTGCTCGGCACCCTGTTCTCGGCCTTCTTCGCCACGCGCGACAACCCCGTGACGATCTGCATGATGTTCTT CAAGGGCATGCTGGCGGCGTTGCCCAGTGCCTTCCTGTTCGGGCATGTCCTGCTGTCGCAGGCCAACGGCTTTCCCATGC TTGCCATGCTGTTCGTCACGCCCCTGTTCCTGGGGCTGCTCGGCGCCTCCAATCCTCGATTGATGGGTTACTGCCTGGCC TTCACCATCTTCAATATCCTGCTGACCATGCCGGGCAACGGCATGGACTTTTCCTTCGACAGCTTCGCCAACCGCGCCAT CGCCGTGATCGTCGGGTTGAGCGCCGTGGTGATGGGCTTCCGCCTGATTCCGGGTCTCGGGGCACCGATCCGGCGCCGCC GCCTGATCGGCGCCATCAGCCATGACCTGCGCCACATCGGCGACTTGCCCCTGCACGAGGAAGAAAGCCGTTTCAGCGGG CGCATGGCCGATCGCCTGCTGCAATTGGCGCGCCATGACGACATGCTGCCCGAGGATCACCGCCATTTGTTCATGATCGG CCTCAACGGGCTCGATCTGGGACGTTCCTGCCTGCGCCTGCGCCATCGCCTGGACGATGCCGCGCCGCCCGTGCGTGACG CCATGCGGCACTTGCTGACCACCCTCGCCGCCGCGTTCGAGGACAGCGCCCACGGCCGCGCGCCACAGGGCATCCAGGCG GCCGGACGAGCGCTGGATGACGCGCTCGTCCGCCATGGCGATATCGAGGAGGATTGGCGGTGGCTACTGGCAGGGCTGGT CGAGCGGCTCGAGCTCACCCTGGCGCGTCAGGCCAATGTCATGGCCGAGCGACTGACACCGGCACCCGCCGCCTGA
Upstream 100 bases:
>100_bases TTCAACTGGGTACGGCTGGCACAACGCATCCCGGTGCGCATCGAACTCGACGACGTTCCCGAGGGGACGCTGCTGAGTGC CGGAATGACGGCCACGATCC
Downstream 100 bases:
>100_bases TGACGACGATGAGAGACCCGAGGAGCACCATGCAGATTCGAGCTTTCCGCGATACCGACGAAGCGGCCATCATTGCGCTC TGGGAACGCTGCGGCCTGAC
Product: fusaric acid resistance protein
Products: NA
Alternate protein names: pHBA efflux pump protein B [H]
Number of amino acids: Translated: 691; Mature: 690
Protein sequence:
>691_residues MSSTTRTQTEPPMSPWIETYLTPSKTSLQFAAKTTLAMLLALYIALWCDLDRPYWALISAAFLQIRPMSGMVVEKGICQI GGTLIGALAGIVIMAFFAQARVPALIALTLWIMLCAYGSSLLRNNFSYGCIMGAVTAMLIVVISANQPPSGIFDIAVARL SELGLGALCATLVSALLWPTHVKEHLAGQADEVINQAFTHAGQRLDASDDAAAMQQSLTASLEPLTMLETDSQAARYEGP DGNGRIRATHVLTRRTLRFFATLGALHQLLHDHRDRINAPLQQLATEIAEGFRGAEHVKGVPAARRELQALRKRAHGYSD TQLDPLQRRVILALREVLGHAMIMLDAREAIAHPGRKQLRAGSLSWHRDHLVALLNAGRAGLVFSCLAVFWLQTHWSNGQ VAMLLGTLFSAFFATRDNPVTICMMFFKGMLAALPSAFLFGHVLLSQANGFPMLAMLFVTPLFLGLLGASNPRLMGYCLA FTIFNILLTMPGNGMDFSFDSFANRAIAVIVGLSAVVMGFRLIPGLGAPIRRRRLIGAISHDLRHIGDLPLHEEESRFSG RMADRLLQLARHDDMLPEDHRHLFMIGLNGLDLGRSCLRLRHRLDDAAPPVRDAMRHLLTTLAAAFEDSAHGRAPQGIQA AGRALDDALVRHGDIEEDWRWLLAGLVERLELTLARQANVMAERLTPAPAA
Sequences:
>Translated_691_residues MSSTTRTQTEPPMSPWIETYLTPSKTSLQFAAKTTLAMLLALYIALWCDLDRPYWALISAAFLQIRPMSGMVVEKGICQI GGTLIGALAGIVIMAFFAQARVPALIALTLWIMLCAYGSSLLRNNFSYGCIMGAVTAMLIVVISANQPPSGIFDIAVARL SELGLGALCATLVSALLWPTHVKEHLAGQADEVINQAFTHAGQRLDASDDAAAMQQSLTASLEPLTMLETDSQAARYEGP DGNGRIRATHVLTRRTLRFFATLGALHQLLHDHRDRINAPLQQLATEIAEGFRGAEHVKGVPAARRELQALRKRAHGYSD TQLDPLQRRVILALREVLGHAMIMLDAREAIAHPGRKQLRAGSLSWHRDHLVALLNAGRAGLVFSCLAVFWLQTHWSNGQ VAMLLGTLFSAFFATRDNPVTICMMFFKGMLAALPSAFLFGHVLLSQANGFPMLAMLFVTPLFLGLLGASNPRLMGYCLA FTIFNILLTMPGNGMDFSFDSFANRAIAVIVGLSAVVMGFRLIPGLGAPIRRRRLIGAISHDLRHIGDLPLHEEESRFSG RMADRLLQLARHDDMLPEDHRHLFMIGLNGLDLGRSCLRLRHRLDDAAPPVRDAMRHLLTTLAAAFEDSAHGRAPQGIQA AGRALDDALVRHGDIEEDWRWLLAGLVERLELTLARQANVMAERLTPAPAA >Mature_690_residues SSTTRTQTEPPMSPWIETYLTPSKTSLQFAAKTTLAMLLALYIALWCDLDRPYWALISAAFLQIRPMSGMVVEKGICQIG GTLIGALAGIVIMAFFAQARVPALIALTLWIMLCAYGSSLLRNNFSYGCIMGAVTAMLIVVISANQPPSGIFDIAVARLS ELGLGALCATLVSALLWPTHVKEHLAGQADEVINQAFTHAGQRLDASDDAAAMQQSLTASLEPLTMLETDSQAARYEGPD GNGRIRATHVLTRRTLRFFATLGALHQLLHDHRDRINAPLQQLATEIAEGFRGAEHVKGVPAARRELQALRKRAHGYSDT QLDPLQRRVILALREVLGHAMIMLDAREAIAHPGRKQLRAGSLSWHRDHLVALLNAGRAGLVFSCLAVFWLQTHWSNGQV AMLLGTLFSAFFATRDNPVTICMMFFKGMLAALPSAFLFGHVLLSQANGFPMLAMLFVTPLFLGLLGASNPRLMGYCLAF TIFNILLTMPGNGMDFSFDSFANRAIAVIVGLSAVVMGFRLIPGLGAPIRRRRLIGAISHDLRHIGDLPLHEEESRFSGR MADRLLQLARHDDMLPEDHRHLFMIGLNGLDLGRSCLRLRHRLDDAAPPVRDAMRHLLTTLAAAFEDSAHGRAPQGIQAA GRALDDALVRHGDIEEDWRWLLAGLVERLELTLARQANVMAERLTPAPAA
Specific function: Efflux pump whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate. Could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell [H]
COG id: COG1289
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aromatic acid exporter ArAE (TC 2.A.85) family [H]
Homologues:
Organism=Escherichia coli, GI1789636, Length=620, Percent_Identity=25.6451612903226, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI1787933, Length=677, Percent_Identity=22.7474150664697, Blast_Score=87, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006726 [H]
Pfam domain/function: PF04632 FUSC [H]
EC number: NA
Molecular weight: Translated: 75667; Mature: 75536
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTTRTQTEPPMSPWIETYLTPSKTSLQFAAKTTLAMLLALYIALWCDLDRPYWALISA CCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH AFLQIRPMSGMVVEKGICQIGGTLIGALAGIVIMAFFAQARVPALIALTLWIMLCAYGSS HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHH LLRNNFSYGCIMGAVTAMLIVVISANQPPSGIFDIAVARLSELGLGALCATLVSALLWPT HHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH HVKEHLAGQADEVINQAFTHAGQRLDASDDAAAMQQSLTASLEPLTMLETDSQAARYEGP HHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHHCCCCC DGNGRIRATHVLTRRTLRFFATLGALHQLLHDHRDRINAPLQQLATEIAEGFRGAEHVKG CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHCC VPAARRELQALRKRAHGYSDTQLDPLQRRVILALREVLGHAMIMLDAREAIAHPGRKQLR CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHH AGSLSWHRDHLVALLNAGRAGLVFSCLAVFWLQTHWSNGQVAMLLGTLFSAFFATRDNPV CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCH TICMMFFKGMLAALPSAFLFGHVLLSQANGFPMLAMLFVTPLFLGLLGASNPRLMGYCLA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH FTIFNILLTMPGNGMDFSFDSFANRAIAVIVGLSAVVMGFRLIPGLGAPIRRRRLIGAIS HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH HDLRHIGDLPLHEEESRFSGRMADRLLQLARHDDMLPEDHRHLFMIGLNGLDLGRSCLRL HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHH RHRLDDAAPPVRDAMRHLLTTLAAAFEDSAHGRAPQGIQAAGRALDDALVRHGDIEEDWR HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHH WLLAGLVERLELTLARQANVMAERLTPAPAA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SSTTRTQTEPPMSPWIETYLTPSKTSLQFAAKTTLAMLLALYIALWCDLDRPYWALISA CCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH AFLQIRPMSGMVVEKGICQIGGTLIGALAGIVIMAFFAQARVPALIALTLWIMLCAYGSS HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHH LLRNNFSYGCIMGAVTAMLIVVISANQPPSGIFDIAVARLSELGLGALCATLVSALLWPT HHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH HVKEHLAGQADEVINQAFTHAGQRLDASDDAAAMQQSLTASLEPLTMLETDSQAARYEGP HHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHHCCCCC DGNGRIRATHVLTRRTLRFFATLGALHQLLHDHRDRINAPLQQLATEIAEGFRGAEHVKG CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHCC VPAARRELQALRKRAHGYSDTQLDPLQRRVILALREVLGHAMIMLDAREAIAHPGRKQLR CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHH AGSLSWHRDHLVALLNAGRAGLVFSCLAVFWLQTHWSNGQVAMLLGTLFSAFFATRDNPV CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCH TICMMFFKGMLAALPSAFLFGHVLLSQANGFPMLAMLFVTPLFLGLLGASNPRLMGYCLA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH FTIFNILLTMPGNGMDFSFDSFANRAIAVIVGLSAVVMGFRLIPGLGAPIRRRRLIGAIS HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH HDLRHIGDLPLHEEESRFSGRMADRLLQLARHDDMLPEDHRHLFMIGLNGLDLGRSCLRL HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHH RHRLDDAAPPVRDAMRHLLTTLAAAFEDSAHGRAPQGIQAAGRALDDALVRHGDIEEDWR HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHH WLLAGLVERLELTLARQANVMAERLTPAPAA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA