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The map label for this gene is ugpA [C]

Identifier: 92114729

GI number: 92114729

Start: 2922064

End: 2922906

Strand: Direct

Name: ugpA [C]

Synonym: Csal_2611

Alternate gene names: 92114729

Gene position: 2922064-2922906 (Clockwise)

Preceding gene: 92114728

Following gene: 92114730

Centisome position: 79.05

GC content: 62.04

Gene sequence:

>843_bases
ATGATGTCGCCAGCCCTTTTCCTGCTCGCCCTGATCACGCTGGTTCCGTTCTTCTCGATCATCTGGATGAGTTTCAACGA
CGTCAGCCTGATGGGCGGGCTGGCCTTCGAGTTCTCGGGCCTCGACAACTGGCAGCGGGTGTTCACGGACCCGGACATCC
GTTCCAGCTGGCTGATCAGCCTGGTCTACTTCCTGGCCACGGTGGGCCTGGAGATGGTCATCGGCACGGTGATGGCGCTG
CTGGTCTACAGCCTGACCCGGGGCAGCAACATCATCATCTCGCTGCTGTTGATCCCGATGTTCATCGCCCCGGTGATCGT
CGGGCTGCTCGGGCGCTTCATGCTCGACCCCAGCCACGGCCTGTATGCCTGGATGCTCAATGAAAGCGGCCTGTTCGACG
GCAACATCCTGGGCAGCGTCGGCTCCGCGATGGTCGCGGTCATCCTCATGGACGTCTGGGAATGGACGCCGCTGGTCGCG
CTGATCGTCCTGGCGGGGCTCACCTCGGTGCCGGAGGACGTGCTCGAGGCGGCCGAGATGGATGGCGCCCGATACGGCCA
GAAGCTGCTCTACATCATCCTGCCGTCGATCTCCAACATCCTGCTGGTGGCGCTGCTGATCCGTGCCATGGATGCGATCC
GTTTCTTCGCGATCATCTTCATCACCACCAACGGCGGGCCCGCGGACTCCACCAAGATCATCCCCATTCGGCTCTACGAC
ATCGCCTTCCGGTTCTTCGACCTGGGCTATGCCGCTGCCGTGGGCATCACCATGCTGGTGTTCTCGATCATGGTCGCCAC
GGCGTTCACGAAACTGCTCAAACGCCAGGAGAAAGCCTCATGA

Upstream 100 bases:

>100_bases
GCAGAGCGCCAAGCAGCGCATCGACCGCATCGTGGGGGCATGACGCATGGCGCTGCTGACCGGAAAACCCTCGGCGCGAC
GACAGGGATTCGAGCTGGCG

Downstream 100 bases:

>100_bases
CCGCCTCCAAGCGCTGGCTTCCCCTTACGTTCAAGATCGCCCTGCTGACGCTACTGCTGCTGTGGACGCTGATACCGATC
GTCTGGATGGTGCTGTCTTC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MMSPALFLLALITLVPFFSIIWMSFNDVSLMGGLAFEFSGLDNWQRVFTDPDIRSSWLISLVYFLATVGLEMVIGTVMAL
LVYSLTRGSNIIISLLLIPMFIAPVIVGLLGRFMLDPSHGLYAWMLNESGLFDGNILGSVGSAMVAVILMDVWEWTPLVA
LIVLAGLTSVPEDVLEAAEMDGARYGQKLLYIILPSISNILLVALLIRAMDAIRFFAIIFITTNGGPADSTKIIPIRLYD
IAFRFFDLGYAAAVGITMLVFSIMVATAFTKLLKRQEKAS

Sequences:

>Translated_280_residues
MMSPALFLLALITLVPFFSIIWMSFNDVSLMGGLAFEFSGLDNWQRVFTDPDIRSSWLISLVYFLATVGLEMVIGTVMAL
LVYSLTRGSNIIISLLLIPMFIAPVIVGLLGRFMLDPSHGLYAWMLNESGLFDGNILGSVGSAMVAVILMDVWEWTPLVA
LIVLAGLTSVPEDVLEAAEMDGARYGQKLLYIILPSISNILLVALLIRAMDAIRFFAIIFITTNGGPADSTKIIPIRLYD
IAFRFFDLGYAAAVGITMLVFSIMVATAFTKLLKRQEKAS
>Mature_280_residues
MMSPALFLLALITLVPFFSIIWMSFNDVSLMGGLAFEFSGLDNWQRVFTDPDIRSSWLISLVYFLATVGLEMVIGTVMAL
LVYSLTRGSNIIISLLLIPMFIAPVIVGLLGRFMLDPSHGLYAWMLNESGLFDGNILGSVGSAMVAVILMDVWEWTPLVA
LIVLAGLTSVPEDVLEAAEMDGARYGQKLLYIILPSISNILLVALLIRAMDAIRFFAIIFITTNGGPADSTKIIPIRLYD
IAFRFFDLGYAAAVGITMLVFSIMVATAFTKLLKRQEKAS

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=272, Percent_Identity=30.1470588235294, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1787570, Length=257, Percent_Identity=25.6809338521401, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1790465, Length=258, Percent_Identity=29.4573643410853, Blast_Score=68, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30736; Mature: 30736

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSPALFLLALITLVPFFSIIWMSFNDVSLMGGLAFEFSGLDNWQRVFTDPDIRSSWLIS
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHEECCCCHHHHHCCCCCCHHHHHHH
LVYFLATVGLEMVIGTVMALLVYSLTRGSNIIISLLLIPMFIAPVIVGLLGRFMLDPSHG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LYAWMLNESGLFDGNILGSVGSAMVAVILMDVWEWTPLVALIVLAGLTSVPEDVLEAAEM
EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHC
DGARYGQKLLYIILPSISNILLVALLIRAMDAIRFFAIIFITTNGGPADSTKIIPIRLYD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEEEHHHH
IAFRFFDLGYAAAVGITMLVFSIMVATAFTKLLKRQEKAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMSPALFLLALITLVPFFSIIWMSFNDVSLMGGLAFEFSGLDNWQRVFTDPDIRSSWLIS
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHEECCCCHHHHHCCCCCCHHHHHHH
LVYFLATVGLEMVIGTVMALLVYSLTRGSNIIISLLLIPMFIAPVIVGLLGRFMLDPSHG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LYAWMLNESGLFDGNILGSVGSAMVAVILMDVWEWTPLVALIVLAGLTSVPEDVLEAAEM
EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHC
DGARYGQKLLYIILPSISNILLVALLIRAMDAIRFFAIIFITTNGGPADSTKIIPIRLYD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEEEHHHH
IAFRFFDLGYAAAVGITMLVFSIMVATAFTKLLKRQEKAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]