| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
Click here to switch to the map view.
The map label for this gene is 92114589
Identifier: 92114589
GI number: 92114589
Start: 2778222
End: 2779169
Strand: Direct
Name: 92114589
Synonym: Csal_2471
Alternate gene names: NA
Gene position: 2778222-2779169 (Clockwise)
Preceding gene: 92114586
Following gene: 92114590
Centisome position: 75.16
GC content: 62.66
Gene sequence:
>948_bases ATGGACCTGCTGGCCGTCTTCTCGCAAACGCTGCAAGTCACGCTGCCCGTCTTCGCCATGGTGTTCCTGGGCATTCTCTT CAAGCGCATCGGCTGGATCGACGCGCACTTCATCTCCACCGCCTCGGCCCTGGTGTTTCGCGCCACCATGCCGACGCTGA TCTTTCTGAGTATCGTCCGGGCCGACCTGGACGTCGCCCTGCAACCGGGCCTCATCGTCTATTTCCTGGGCTTTTCGGTT CTCAGCTTTTTCCTGGCCTGGGGCTGGGCCATCTGGCGCTGCCCCTTCGCCGACCGCGGCGTCTTCGCCCAGGGTGCGTT TCGCGGCAACTGCGGCATCGTCGGCCTGGCCCTCGCGGCAAGCCAATACGGCGACTACGGCCTATCGCTGGGGAGCATCA TGGCTGGGGGCATCATCATCGTCTACAACGTACTGGCGGCGATCATCCTCGCGTACTACAGTGCCAACGCACGCTCGGGC CTCGGCTCCATCCTCAAGCATGTTGCCAGGAACCCGTTGATTCTCAGCGTGTTGCTGGCGATGCCCTTCGCCTACTTCCA GGTCCCGCTGCCCGAGTGGTTGATGACCTCGGGCGATTACTTCGGCGCCATGTCCCTGCCGTTGGCCCTGGTCTGCATCG GCGGCACGCTGTCGTTCAGTTCCGTCAAGCAGAGTAGCGGTCCGGCCCTGGATGCCAGCTTATGGAAAATCGTCTGGATT CCCCTGCTGGGTGTACTGGGCGCCTATGCGCTCGGCTACCGCGGACGGGAGCTGGGCATGCTCTTCCTGTTTCTGGGAAC CCCGGGGGCTGCCGCCAGCTTCGTGATGGCCAAGGCCGTCAATGCCAACGCCAAGCTGGCCGCCAACATCATCGTGATCA CTACCTTCGCTTCGCTGTTCACGCTCAGCGCCGGCGTTTTCATATTGACCATCGCGGGATGGATCTAG
Upstream 100 bases:
>100_bases GTCTCGCCCTACCCGCCTGCGCAATACGCTCTTCTGGATCGTCGTGGCCATCGCACTCATCGTGGGCTTCGTGCTGGCAA GACAGGGAAGCTGACCGCCC
Downstream 100 bases:
>100_bases GGTTCGACACGACAAGGAGTCAACCGCGACATGCTCGACAGTTACAGCGCCCTGGCCGGCCAGTTCTTCGGCGTGGTCTC GTTGATACTTTGCCTTCTGG
Product: auxin efflux carrier
Products: NA
Alternate protein names: Permease; Malonate Transporter; Membrane Transporter; Transporter AEC Family; Malate Permease; AEC Family Malonate Efflux Carrier; Transporter Of Auxin Efflux Carrier Family; Membrane Transport Protein Auxin Efflux Carrier; Membrane Transport Protein Family Transporter; Transporter Auxin Efflux Carrier Family; Transporter Auxin Efflux Carrier Family Protein; Auxin Efflux Carrier Protein
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MDLLAVFSQTLQVTLPVFAMVFLGILFKRIGWIDAHFISTASALVFRATMPTLIFLSIVRADLDVALQPGLIVYFLGFSV LSFFLAWGWAIWRCPFADRGVFAQGAFRGNCGIVGLALAASQYGDYGLSLGSIMAGGIIIVYNVLAAIILAYYSANARSG LGSILKHVARNPLILSVLLAMPFAYFQVPLPEWLMTSGDYFGAMSLPLALVCIGGTLSFSSVKQSSGPALDASLWKIVWI PLLGVLGAYALGYRGRELGMLFLFLGTPGAAASFVMAKAVNANAKLAANIIVITTFASLFTLSAGVFILTIAGWI
Sequences:
>Translated_315_residues MDLLAVFSQTLQVTLPVFAMVFLGILFKRIGWIDAHFISTASALVFRATMPTLIFLSIVRADLDVALQPGLIVYFLGFSV LSFFLAWGWAIWRCPFADRGVFAQGAFRGNCGIVGLALAASQYGDYGLSLGSIMAGGIIIVYNVLAAIILAYYSANARSG LGSILKHVARNPLILSVLLAMPFAYFQVPLPEWLMTSGDYFGAMSLPLALVCIGGTLSFSSVKQSSGPALDASLWKIVWI PLLGVLGAYALGYRGRELGMLFLFLGTPGAAASFVMAKAVNANAKLAANIIVITTFASLFTLSAGVFILTIAGWI >Mature_315_residues MDLLAVFSQTLQVTLPVFAMVFLGILFKRIGWIDAHFISTASALVFRATMPTLIFLSIVRADLDVALQPGLIVYFLGFSV LSFFLAWGWAIWRCPFADRGVFAQGAFRGNCGIVGLALAASQYGDYGLSLGSIMAGGIIIVYNVLAAIILAYYSANARSG LGSILKHVARNPLILSVLLAMPFAYFQVPLPEWLMTSGDYFGAMSLPLALVCIGGTLSFSSVKQSSGPALDASLWKIVWI PLLGVLGAYALGYRGRELGMLFLFLGTPGAAASFVMAKAVNANAKLAANIIVITTFASLFTLSAGVFILTIAGWI
Specific function: Unknown
COG id: COG0679
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33575; Mature: 33575
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLLAVFSQTLQVTLPVFAMVFLGILFKRIGWIDAHFISTASALVFRATMPTLIFLSIVR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADLDVALQPGLIVYFLGFSVLSFFLAWGWAIWRCPFADRGVFAQGAFRGNCGIVGLALAA HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCHHHHHHHH SQYGDYGLSLGSIMAGGIIIVYNVLAAIILAYYSANARSGLGSILKHVARNPLILSVLLA HHCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHH MPFAYFQVPLPEWLMTSGDYFGAMSLPLALVCIGGTLSFSSVKQSSGPALDASLWKIVWI HHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHH PLLGVLGAYALGYRGRELGMLFLFLGTPGAAASFVMAKAVNANAKLAANIIVITTFASLF HHHHHHHHHHHCCCCCHHCEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH TLSAGVFILTIAGWI HHHCCHHHHHHHHCC >Mature Secondary Structure MDLLAVFSQTLQVTLPVFAMVFLGILFKRIGWIDAHFISTASALVFRATMPTLIFLSIVR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADLDVALQPGLIVYFLGFSVLSFFLAWGWAIWRCPFADRGVFAQGAFRGNCGIVGLALAA HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCHHHHHHHH SQYGDYGLSLGSIMAGGIIIVYNVLAAIILAYYSANARSGLGSILKHVARNPLILSVLLA HHCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHH MPFAYFQVPLPEWLMTSGDYFGAMSLPLALVCIGGTLSFSSVKQSSGPALDASLWKIVWI HHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHH PLLGVLGAYALGYRGRELGMLFLFLGTPGAAASFVMAKAVNANAKLAANIIVITTFASLF HHHHHHHHHHHCCCCCHHCEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH TLSAGVFILTIAGWI HHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA