Definition Chromohalobacter salexigens DSM 3043 chromosome, complete genome.
Accession NC_007963
Length 3,696,649

Click here to switch to the map view.

The map label for this gene is 92114387

Identifier: 92114387

GI number: 92114387

Start: 2547783

End: 2548430

Strand: Direct

Name: 92114387

Synonym: Csal_2266

Alternate gene names: NA

Gene position: 2547783-2548430 (Clockwise)

Preceding gene: 92114380

Following gene: 92114388

Centisome position: 68.92

GC content: 52.62

Gene sequence:

>648_bases
ATGGCTGATGCCATCAGGCATCTAAGAAAAATACTCAAGCCACTCCCTCAATCGGACGACACCTTACCAGAGTTAGGCGT
TATAATAAGTACCAAATTTAACATTTCCTTATGTCGCTACATTTATTTACAAACGAGATACAAGATGACAAAACTCATGC
ATCGCCACCTGCCGGTACTCATCTCTCTCTCACTTACCGCCTGCGCGGGCGCACCGCAGACACAGGTGGACTATGTACCG
CCCACCGTGAAGTTCGAAGGTACCTTGCCTTGCGATGACTGCAGCGGCATCGACACGACACTCGTATTGAAGCGCAACAC
CGTTACCAGAGAGCCTGACGGCTTCTACCTTCACGAGGTGCGACTAGATGCACCCGGCGGCGAACGTGTCGACACAAGCT
GGGGAAACTGGACGAAAAGTCGCGATATTGCCGACTTCCAACGGCGGATCTACGTACTGCAACCCGAGAACGGCACCGCC
CGCGTCTACATCCCTCGTGACAATGGCGACTTGCAGCCACTGGGTTCACAAGGCAGCCCACTTACCAATGACGAAGGAGA
GAGCATCTTGCTGCGTCGCATGACACCAGAACTGTCTCTATCGTCCAGCGATACGAATAACGAGAGTCTCGAAGACAGTG
ACGGATAA

Upstream 100 bases:

>100_bases
CCGTGACCGAAAGCAGAAGTAATAGCATTCCCCAATTGCGTATGGACGCTCTCATTGCCGTCTCATTCACTCTTTCAGCT
TAGCCAGTGGAAGGCCTGCA

Downstream 100 bases:

>100_bases
GCAACGACTTATGCTAAGGTAATGCATGAACTGGTTCAGCCCCTTTTGTAAGAGATGACCTACAAAACCAATAGTGCATC
ACTGAAGTGCCGCTTACACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MADAIRHLRKILKPLPQSDDTLPELGVIISTKFNISLCRYIYLQTRYKMTKLMHRHLPVLISLSLTACAGAPQTQVDYVP
PTVKFEGTLPCDDCSGIDTTLVLKRNTVTREPDGFYLHEVRLDAPGGERVDTSWGNWTKSRDIADFQRRIYVLQPENGTA
RVYIPRDNGDLQPLGSQGSPLTNDEGESILLRRMTPELSLSSSDTNNESLEDSDG

Sequences:

>Translated_215_residues
MADAIRHLRKILKPLPQSDDTLPELGVIISTKFNISLCRYIYLQTRYKMTKLMHRHLPVLISLSLTACAGAPQTQVDYVP
PTVKFEGTLPCDDCSGIDTTLVLKRNTVTREPDGFYLHEVRLDAPGGERVDTSWGNWTKSRDIADFQRRIYVLQPENGTA
RVYIPRDNGDLQPLGSQGSPLTNDEGESILLRRMTPELSLSSSDTNNESLEDSDG
>Mature_214_residues
ADAIRHLRKILKPLPQSDDTLPELGVIISTKFNISLCRYIYLQTRYKMTKLMHRHLPVLISLSLTACAGAPQTQVDYVPP
TVKFEGTLPCDDCSGIDTTLVLKRNTVTREPDGFYLHEVRLDAPGGERVDTSWGNWTKSRDIADFQRRIYVLQPENGTAR
VYIPRDNGDLQPLGSQGSPLTNDEGESILLRRMTPELSLSSSDTNNESLEDSDG

Specific function: Unknown

COG id: COG3015

COG function: function code MP; Uncharacterized lipoprotein NlpE involved in copper resistance

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24077; Mature: 23945

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADAIRHLRKILKPLPQSDDTLPELGVIISTKFNISLCRYIYLQTRYKMTKLMHRHLPVL
CHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHCCCEE
ISLSLTACAGAPQTQVDYVPPTVKFEGTLPCDDCSGIDTTLVLKRNTVTREPDGFYLHEV
EEEEEHHCCCCCCCEEECCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEE
RLDAPGGERVDTSWGNWTKSRDIADFQRRIYVLQPENGTARVYIPRDNGDLQPLGSQGSP
EEECCCCCEEECCCCCCCCCCCHHHHCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCC
LTNDEGESILLRRMTPELSLSSSDTNNESLEDSDG
CCCCCCCEEEEEECCCCCEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
ADAIRHLRKILKPLPQSDDTLPELGVIISTKFNISLCRYIYLQTRYKMTKLMHRHLPVL
HHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHCCCEE
ISLSLTACAGAPQTQVDYVPPTVKFEGTLPCDDCSGIDTTLVLKRNTVTREPDGFYLHEV
EEEEEHHCCCCCCCEEECCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEE
RLDAPGGERVDTSWGNWTKSRDIADFQRRIYVLQPENGTARVYIPRDNGDLQPLGSQGSP
EEECCCCCEEECCCCCCCCCCCHHHHCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCC
LTNDEGESILLRRMTPELSLSSSDTNNESLEDSDG
CCCCCCCEEEEEECCCCCEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA