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The map label for this gene is groS

Identifier: 92114281

GI number: 92114281

Start: 2427743

End: 2428033

Strand: Direct

Name: groS

Synonym: Csal_2159

Alternate gene names: 92114281

Gene position: 2427743-2428033 (Clockwise)

Preceding gene: 92114280

Following gene: 92114282

Centisome position: 65.67

GC content: 59.45

Gene sequence:

>291_bases
ATGAAAATCCGTCCTTTGCACGATCGCGTCGTCGTCCGTCGCGTGGAAGAAGAGCAGAAGACCGCTGGCGGCATCGTGCT
CCCGGGTAATGCTCAAGAGAAGCCCACTCGCGGCGAAGTCCTCGCCGTGGGTAACGGCCGCATTCTCGAGAGCGGCGAAG
TGCGCCCGCTGGACGTCAAGGTGGGTGACACCGTGATCTTCAAGGATGGCTTCGGTGTCGAGAAGCAGAAAATCGATGGC
GAAGAAGTCCTGATCATGAGCGAAAGCGACATTCTCGCCGTCGCCGAGTGA

Upstream 100 bases:

>100_bases
ATGCGTCGGCTTTATAAACAGAAGGCCTAGCCTTCACCCCGTGCGCCTGGCGTCACGGGATTACCACATGACCCATGTAA
CCATCAGGAGAACGTGAGCA

Downstream 100 bases:

>100_bases
TCTTCACGCTCGCCGAGCACATTTTCGTTTCACGTTTGCGCGATGCATCGCGCCTACTACCTACTAATGGGAAGAGCTAG
ACATGGCAGCTAAACAAATC

Product: chaperonin Cpn10

Products: NA

Alternate protein names: GroES protein; Protein Cpn10

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MKIRPLHDRVVVRRVEEEQKTAGGIVLPGNAQEKPTRGEVLAVGNGRILESGEVRPLDVKVGDTVIFKDGFGVEKQKIDG
EEVLIMSESDILAVAE

Sequences:

>Translated_96_residues
MKIRPLHDRVVVRRVEEEQKTAGGIVLPGNAQEKPTRGEVLAVGNGRILESGEVRPLDVKVGDTVIFKDGFGVEKQKIDG
EEVLIMSESDILAVAE
>Mature_96_residues
MKIRPLHDRVVVRRVEEEQKTAGGIVLPGNAQEKPTRGEVLAVGNGRILESGEVRPLDVKVGDTVIFKDGFGVEKQKIDG
EEVLIMSESDILAVAE

Specific function: Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter

COG id: COG0234

COG function: function code O; Co-chaperonin GroES (HSP10)

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GroES chaperonin family

Homologues:

Organism=Escherichia coli, GI1790585, Length=96, Percent_Identity=76.0416666666667, Blast_Score=147, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI17555568, Length=92, Percent_Identity=42.3913043478261, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21356029, Length=98, Percent_Identity=44.8979591836735, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: 980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 1274 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): CH10_CHRSD (Q1QVJ8)

Other databases:

- EMBL:   CP000285
- RefSeq:   YP_574209.1
- ProteinModelPortal:   Q1QVJ8
- SMR:   Q1QVJ8
- STRING:   Q1QVJ8
- GeneID:   4026653
- GenomeReviews:   CP000285_GR
- KEGG:   csa:Csal_2159
- NMPDR:   fig|290398.4.peg.2625
- eggNOG:   COG0234
- HOGENOM:   HBG703377
- OMA:   SEKIDGE
- BioCyc:   CSAL290398:CSAL_2159-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00580
- InterPro:   IPR020818
- InterPro:   IPR018369
- InterPro:   IPR011032
- Gene3D:   G3DSA:2.30.33.40
- PANTHER:   PTHR10772
- PRINTS:   PR00297
- SMART:   SM00883

Pfam domain/function: PF00166 Cpn10; SSF50129 GroES_like

EC number: NA

Molecular weight: Translated: 10463; Mature: 10463

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS00681 CHAPERONINS_CPN10

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIRPLHDRVVVRRVEEEQKTAGGIVLPGNAQEKPTRGEVLAVGNGRILESGEVRPLDVK
CCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEECCCEEEECCCEEEEEEE
VGDTVIFKDGFGVEKQKIDGEEVLIMSESDILAVAE
CCCEEEEECCCCCCCCCCCCCEEEEECCCCEEEEEC
>Mature Secondary Structure
MKIRPLHDRVVVRRVEEEQKTAGGIVLPGNAQEKPTRGEVLAVGNGRILESGEVRPLDVK
CCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEECCCEEEECCCEEEEEEE
VGDTVIFKDGFGVEKQKIDGEEVLIMSESDILAVAE
CCCEEEEECCCCCCCCCCCCCEEEEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA