| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is 92114057
Identifier: 92114057
GI number: 92114057
Start: 2191436
End: 2192425
Strand: Direct
Name: 92114057
Synonym: Csal_1934
Alternate gene names: NA
Gene position: 2191436-2192425 (Clockwise)
Preceding gene: 92114056
Following gene: 92114060
Centisome position: 59.28
GC content: 64.75
Gene sequence:
>990_bases ATGACCTCCATGACCCACCGCTTCATGGGCGCGTGTCTCGCCCTCTTGCTCGTGCTGTCCGGCCCGGCGCTGGCCGCCGA GGAGCGCGACGGCACCGACACGTCCGACTCGCTGAAAGTGATGCTCGACTGGTACACCAACCCCACGCATGCGCCATTGG TCATCGCAAAACAGCGCGGCCTCTTCCAGGATCACGGACTGGACGTCGAACTCATCTCCCCCGCCGACCCGAGCGTACCG CCCAAGCTGGTCGCGGCAGGCAAGATCGACCTGGCACTCAGCTACCAGCCCCAGCTGCACCTGCAAGTCGACCAGGGCCT CCCCCTGGTGCGCGTGGGCACGCTGGTGGCAACGCCTCTCAATGCCACGCTGGTACGCGCCGACAGCGGCATCGAAAGCA TGGCGGATCTGGCCGGCAAGCGTATCGGCTATTCCGTGGGCGGAGTCGAGGAAGTGCTGCTCAACACCATGCTCGAACAC AATGGGGTCGCGCCCGAGGACGTCGAGATGGTCAACGTCAATTTCGCGCTGACGCCGGCCTTGATCGGAGAAAAGGTCGA CGCCATCACCGGTGCGTTTCGCAACTTCGAGCTGGCACAGATGGCTCAGGAAGGCGTCGAGGGCCGGGCGTTCTATATCG AGGAAGAAGGCGTTCCCACCTACGACGAGCTGATCTTCGTGGCCAACCGCGACACGCTGGATGCCCATCGCGCTGCCTAT GCGCGTTTCATGGCCGCCATCGGCGAGGCCACGGCCTGGATCATCAATCACCCCGAGGAGGGCTGGGAAGCCTTCAAGGC CTACGATCCGGCGCTGGACACACCGGTCAACCGCAAGGCCTGGGAGAACACGCTGCCACGCTTCGCCCTGCGCCCTGCCG CGCTGGATGGACAACGCTACGAAGCCTTCGAGGCATTCCTTCTCGAGCGCGGCCAGATCAAGGCCAAGAGTCCGCTGTCG CGCCTCGCCGTCGACCTCAATCGCCCCTGA
Upstream 100 bases:
>100_bases CTGAAGCAATGAACCTCGCCCGGCGAGCCGTCTCGCGGGGCATTCACGATAACGAAACGCCCCCTCGCTATCGGGGCAAC AACTCGCAGGAGAATAACGC
Downstream 100 bases:
>100_bases TTCGACACGGCATGGACATGGAGCGCTGTGCGCTCCATGCCGCTGCCTTCATTCCGCCGCCAGAAAGCGCGACATGGCCG ACTGAAAGGCCTCCGGCTGT
Product: NLPA lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MTSMTHRFMGACLALLLVLSGPALAAEERDGTDTSDSLKVMLDWYTNPTHAPLVIAKQRGLFQDHGLDVELISPADPSVP PKLVAAGKIDLALSYQPQLHLQVDQGLPLVRVGTLVATPLNATLVRADSGIESMADLAGKRIGYSVGGVEEVLLNTMLEH NGVAPEDVEMVNVNFALTPALIGEKVDAITGAFRNFELAQMAQEGVEGRAFYIEEEGVPTYDELIFVANRDTLDAHRAAY ARFMAAIGEATAWIINHPEEGWEAFKAYDPALDTPVNRKAWENTLPRFALRPAALDGQRYEAFEAFLLERGQIKAKSPLS RLAVDLNRP
Sequences:
>Translated_329_residues MTSMTHRFMGACLALLLVLSGPALAAEERDGTDTSDSLKVMLDWYTNPTHAPLVIAKQRGLFQDHGLDVELISPADPSVP PKLVAAGKIDLALSYQPQLHLQVDQGLPLVRVGTLVATPLNATLVRADSGIESMADLAGKRIGYSVGGVEEVLLNTMLEH NGVAPEDVEMVNVNFALTPALIGEKVDAITGAFRNFELAQMAQEGVEGRAFYIEEEGVPTYDELIFVANRDTLDAHRAAY ARFMAAIGEATAWIINHPEEGWEAFKAYDPALDTPVNRKAWENTLPRFALRPAALDGQRYEAFEAFLLERGQIKAKSPLS RLAVDLNRP >Mature_328_residues TSMTHRFMGACLALLLVLSGPALAAEERDGTDTSDSLKVMLDWYTNPTHAPLVIAKQRGLFQDHGLDVELISPADPSVPP KLVAAGKIDLALSYQPQLHLQVDQGLPLVRVGTLVATPLNATLVRADSGIESMADLAGKRIGYSVGGVEEVLLNTMLEHN GVAPEDVEMVNVNFALTPALIGEKVDAITGAFRNFELAQMAQEGVEGRAFYIEEEGVPTYDELIFVANRDTLDAHRAAYA RFMAAIGEATAWIINHPEEGWEAFKAYDPALDTPVNRKAWENTLPRFALRPAALDGQRYEAFEAFLLERGQIKAKSPLSR LAVDLNRP
Specific function: Probably involved in thiamine biosynthesis [H]
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NMT1 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322616, Length=266, Percent_Identity=25.5639097744361, Blast_Score=125, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6319957, Length=266, Percent_Identity=25.5639097744361, Blast_Score=124, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6321050, Length=266, Percent_Identity=25.5639097744361, Blast_Score=123, Evalue=4e-29, Organism=Saccharomyces cerevisiae, GI6323997, Length=266, Percent_Identity=25.5639097744361, Blast_Score=123, Evalue=5e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015168 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 35874; Mature: 35743
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSMTHRFMGACLALLLVLSGPALAAEERDGTDTSDSLKVMLDWYTNPTHAPLVIAKQRG CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCC LFQDHGLDVELISPADPSVPPKLVAAGKIDLALSYQPQLHLQVDQGLPLVRVGTLVATPL CHHHCCCCEEEECCCCCCCCCCEEECCCEEEEEECCCCEEEEECCCCCEEEEHHHHCCCC NATLVRADSGIESMADLAGKRIGYSVGGVEEVLLNTMLEHNGVAPEDVEMVNVNFALTPA CCEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEECHH LIGEKVDAITGAFRNFELAQMAQEGVEGRAFYIEEEGVPTYDELIFVANRDTLDAHRAAY HHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCCCCHHHEEEEECCCCHHHHHHHH ARFMAAIGEATAWIINHPEEGWEAFKAYDPALDTPVNRKAWENTLPRFALRPAALDGQRY HHHHHHHHCCEEEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHEECCCCCCCHHH EAFEAFLLERGQIKAKSPLSRLAVDLNRP HHHHHHHHHCCCCCCCCCHHHHHEECCCC >Mature Secondary Structure TSMTHRFMGACLALLLVLSGPALAAEERDGTDTSDSLKVMLDWYTNPTHAPLVIAKQRG CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCC LFQDHGLDVELISPADPSVPPKLVAAGKIDLALSYQPQLHLQVDQGLPLVRVGTLVATPL CHHHCCCCEEEECCCCCCCCCCEEECCCEEEEEECCCCEEEEECCCCCEEEEHHHHCCCC NATLVRADSGIESMADLAGKRIGYSVGGVEEVLLNTMLEHNGVAPEDVEMVNVNFALTPA CCEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEECHH LIGEKVDAITGAFRNFELAQMAQEGVEGRAFYIEEEGVPTYDELIFVANRDTLDAHRAAY HHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCCCCHHHEEEEECCCCHHHHHHHH ARFMAAIGEATAWIINHPEEGWEAFKAYDPALDTPVNRKAWENTLPRFALRPAALDGQRY HHHHHHHHCCEEEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHEECCCCCCCHHH EAFEAFLLERGQIKAKSPLSRLAVDLNRP HHHHHHHHHCCCCCCCCCHHHHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]