Definition Chromohalobacter salexigens DSM 3043 chromosome, complete genome.
Accession NC_007963
Length 3,696,649

Click here to switch to the map view.

The map label for this gene is 92114057

Identifier: 92114057

GI number: 92114057

Start: 2191436

End: 2192425

Strand: Direct

Name: 92114057

Synonym: Csal_1934

Alternate gene names: NA

Gene position: 2191436-2192425 (Clockwise)

Preceding gene: 92114056

Following gene: 92114060

Centisome position: 59.28

GC content: 64.75

Gene sequence:

>990_bases
ATGACCTCCATGACCCACCGCTTCATGGGCGCGTGTCTCGCCCTCTTGCTCGTGCTGTCCGGCCCGGCGCTGGCCGCCGA
GGAGCGCGACGGCACCGACACGTCCGACTCGCTGAAAGTGATGCTCGACTGGTACACCAACCCCACGCATGCGCCATTGG
TCATCGCAAAACAGCGCGGCCTCTTCCAGGATCACGGACTGGACGTCGAACTCATCTCCCCCGCCGACCCGAGCGTACCG
CCCAAGCTGGTCGCGGCAGGCAAGATCGACCTGGCACTCAGCTACCAGCCCCAGCTGCACCTGCAAGTCGACCAGGGCCT
CCCCCTGGTGCGCGTGGGCACGCTGGTGGCAACGCCTCTCAATGCCACGCTGGTACGCGCCGACAGCGGCATCGAAAGCA
TGGCGGATCTGGCCGGCAAGCGTATCGGCTATTCCGTGGGCGGAGTCGAGGAAGTGCTGCTCAACACCATGCTCGAACAC
AATGGGGTCGCGCCCGAGGACGTCGAGATGGTCAACGTCAATTTCGCGCTGACGCCGGCCTTGATCGGAGAAAAGGTCGA
CGCCATCACCGGTGCGTTTCGCAACTTCGAGCTGGCACAGATGGCTCAGGAAGGCGTCGAGGGCCGGGCGTTCTATATCG
AGGAAGAAGGCGTTCCCACCTACGACGAGCTGATCTTCGTGGCCAACCGCGACACGCTGGATGCCCATCGCGCTGCCTAT
GCGCGTTTCATGGCCGCCATCGGCGAGGCCACGGCCTGGATCATCAATCACCCCGAGGAGGGCTGGGAAGCCTTCAAGGC
CTACGATCCGGCGCTGGACACACCGGTCAACCGCAAGGCCTGGGAGAACACGCTGCCACGCTTCGCCCTGCGCCCTGCCG
CGCTGGATGGACAACGCTACGAAGCCTTCGAGGCATTCCTTCTCGAGCGCGGCCAGATCAAGGCCAAGAGTCCGCTGTCG
CGCCTCGCCGTCGACCTCAATCGCCCCTGA

Upstream 100 bases:

>100_bases
CTGAAGCAATGAACCTCGCCCGGCGAGCCGTCTCGCGGGGCATTCACGATAACGAAACGCCCCCTCGCTATCGGGGCAAC
AACTCGCAGGAGAATAACGC

Downstream 100 bases:

>100_bases
TTCGACACGGCATGGACATGGAGCGCTGTGCGCTCCATGCCGCTGCCTTCATTCCGCCGCCAGAAAGCGCGACATGGCCG
ACTGAAAGGCCTCCGGCTGT

Product: NLPA lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MTSMTHRFMGACLALLLVLSGPALAAEERDGTDTSDSLKVMLDWYTNPTHAPLVIAKQRGLFQDHGLDVELISPADPSVP
PKLVAAGKIDLALSYQPQLHLQVDQGLPLVRVGTLVATPLNATLVRADSGIESMADLAGKRIGYSVGGVEEVLLNTMLEH
NGVAPEDVEMVNVNFALTPALIGEKVDAITGAFRNFELAQMAQEGVEGRAFYIEEEGVPTYDELIFVANRDTLDAHRAAY
ARFMAAIGEATAWIINHPEEGWEAFKAYDPALDTPVNRKAWENTLPRFALRPAALDGQRYEAFEAFLLERGQIKAKSPLS
RLAVDLNRP

Sequences:

>Translated_329_residues
MTSMTHRFMGACLALLLVLSGPALAAEERDGTDTSDSLKVMLDWYTNPTHAPLVIAKQRGLFQDHGLDVELISPADPSVP
PKLVAAGKIDLALSYQPQLHLQVDQGLPLVRVGTLVATPLNATLVRADSGIESMADLAGKRIGYSVGGVEEVLLNTMLEH
NGVAPEDVEMVNVNFALTPALIGEKVDAITGAFRNFELAQMAQEGVEGRAFYIEEEGVPTYDELIFVANRDTLDAHRAAY
ARFMAAIGEATAWIINHPEEGWEAFKAYDPALDTPVNRKAWENTLPRFALRPAALDGQRYEAFEAFLLERGQIKAKSPLS
RLAVDLNRP
>Mature_328_residues
TSMTHRFMGACLALLLVLSGPALAAEERDGTDTSDSLKVMLDWYTNPTHAPLVIAKQRGLFQDHGLDVELISPADPSVPP
KLVAAGKIDLALSYQPQLHLQVDQGLPLVRVGTLVATPLNATLVRADSGIESMADLAGKRIGYSVGGVEEVLLNTMLEHN
GVAPEDVEMVNVNFALTPALIGEKVDAITGAFRNFELAQMAQEGVEGRAFYIEEEGVPTYDELIFVANRDTLDAHRAAYA
RFMAAIGEATAWIINHPEEGWEAFKAYDPALDTPVNRKAWENTLPRFALRPAALDGQRYEAFEAFLLERGQIKAKSPLSR
LAVDLNRP

Specific function: Probably involved in thiamine biosynthesis [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NMT1 family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322616, Length=266, Percent_Identity=25.5639097744361, Blast_Score=125, Evalue=1e-29,
Organism=Saccharomyces cerevisiae, GI6319957, Length=266, Percent_Identity=25.5639097744361, Blast_Score=124, Evalue=2e-29,
Organism=Saccharomyces cerevisiae, GI6321050, Length=266, Percent_Identity=25.5639097744361, Blast_Score=123, Evalue=4e-29,
Organism=Saccharomyces cerevisiae, GI6323997, Length=266, Percent_Identity=25.5639097744361, Blast_Score=123, Evalue=5e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015168 [H]

Pfam domain/function: PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 35874; Mature: 35743

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSMTHRFMGACLALLLVLSGPALAAEERDGTDTSDSLKVMLDWYTNPTHAPLVIAKQRG
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCC
LFQDHGLDVELISPADPSVPPKLVAAGKIDLALSYQPQLHLQVDQGLPLVRVGTLVATPL
CHHHCCCCEEEECCCCCCCCCCEEECCCEEEEEECCCCEEEEECCCCCEEEEHHHHCCCC
NATLVRADSGIESMADLAGKRIGYSVGGVEEVLLNTMLEHNGVAPEDVEMVNVNFALTPA
CCEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEECHH
LIGEKVDAITGAFRNFELAQMAQEGVEGRAFYIEEEGVPTYDELIFVANRDTLDAHRAAY
HHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCCCCHHHEEEEECCCCHHHHHHHH
ARFMAAIGEATAWIINHPEEGWEAFKAYDPALDTPVNRKAWENTLPRFALRPAALDGQRY
HHHHHHHHCCEEEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHEECCCCCCCHHH
EAFEAFLLERGQIKAKSPLSRLAVDLNRP
HHHHHHHHHCCCCCCCCCHHHHHEECCCC
>Mature Secondary Structure 
TSMTHRFMGACLALLLVLSGPALAAEERDGTDTSDSLKVMLDWYTNPTHAPLVIAKQRG
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCC
LFQDHGLDVELISPADPSVPPKLVAAGKIDLALSYQPQLHLQVDQGLPLVRVGTLVATPL
CHHHCCCCEEEECCCCCCCCCCEEECCCEEEEEECCCCEEEEECCCCCEEEEHHHHCCCC
NATLVRADSGIESMADLAGKRIGYSVGGVEEVLLNTMLEHNGVAPEDVEMVNVNFALTPA
CCEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEECHH
LIGEKVDAITGAFRNFELAQMAQEGVEGRAFYIEEEGVPTYDELIFVANRDTLDAHRAAY
HHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCCCCHHHEEEEECCCCHHHHHHHH
ARFMAAIGEATAWIINHPEEGWEAFKAYDPALDTPVNRKAWENTLPRFALRPAALDGQRY
HHHHHHHHCCEEEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHEECCCCCCCHHH
EAFEAFLLERGQIKAKSPLSRLAVDLNRP
HHHHHHHHHCCCCCCCCCHHHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]