| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is tauC [C]
Identifier: 92114056
GI number: 92114056
Start: 2190572
End: 2191339
Strand: Direct
Name: tauC [C]
Synonym: Csal_1933
Alternate gene names: 92114056
Gene position: 2190572-2191339 (Clockwise)
Preceding gene: 92114055
Following gene: 92114057
Centisome position: 59.26
GC content: 64.71
Gene sequence:
>768_bases ATGACACTTCTCAAGCGCCTCTGGCCGGCCATGCTCGGCCTCGTTGCCCTGCTAGGGCTATGGCAAGGACTCGTCGTCGC CACCGGCGTGCCGGGTTACGTACTGCCGTCCCCGCTCGCCGTGGTGCAAGCCCTCGCCGCCCATCATCAGTTACTCTGGC ATCATACCGGCATCACCGTGATCGAGATCGTCGCCGGCCTGTTCATCGGCTGCCTCAGCGGCTTGCTCACCGCGCTCGCC CTGGCCCGCTTTCATGGCCTCAGGCGAACCTTGCTGCCGATCCTGTTGATCAGCCAGGCCATTCCGCTGTTCGCCCTGGC CCCGATTCTCATGCTATGGCTGGGTTACGGCATGACCGCCAAGATCGTCATGGCGACCCTGATCATCTATTTTCCGGTCG CCTCGACATGTTACGACGGCTTGCGCCAGACCCCGCAGGGGTGGCTGGACCTGGCACAGACCCTGGGCGCCGACCGCCGC CGTCGACTGCTGCGCATTCAATTGCCCGCGGCTCTGCCGGCCCTGGCATCCGGCATGCGCATGGCCGCCAGCGCCGCCCC CATCGGTGCCGTGATCGGCGAATGGGTCGGCTCCAGCCAAGGATTGGGATACTTGATGCTCAACGCGAATGCACGCATGC AAGTCGACCTGATGTTCGCCGCCTTGCTGATCCTCGTCACCTTCGGCGTGGCGCTCTATTTCGCCATGGACGCCCTGATG CGCCACCTGATGCCATGGCATGAGGACCGCACCAGCGCCCAAGGCTGA
Upstream 100 bases:
>100_bases CCGGCCAGCGACCACGCGCGCTGGAAGCCCCCGACATGCTGCGCCTGCAGCCACGCCTGGTAGCGCGCCTGCATGCCCCG CTCACCGCCGGGAGCCGAGC
Downstream 100 bases:
>100_bases AGCAATGAACCTCGCCCGGCGAGCCGTCTCGCGGGGCATTCACGATAACGAAACGCCCCCTCGCTATCGGGGCAACAACT CGCAGGAGAATAACGCATGA
Product: binding-protein-dependent transport systems inner membrane component
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MTLLKRLWPAMLGLVALLGLWQGLVVATGVPGYVLPSPLAVVQALAAHHQLLWHHTGITVIEIVAGLFIGCLSGLLTALA LARFHGLRRTLLPILLISQAIPLFALAPILMLWLGYGMTAKIVMATLIIYFPVASTCYDGLRQTPQGWLDLAQTLGADRR RRLLRIQLPAALPALASGMRMAASAAPIGAVIGEWVGSSQGLGYLMLNANARMQVDLMFAALLILVTFGVALYFAMDALM RHLMPWHEDRTSAQG
Sequences:
>Translated_255_residues MTLLKRLWPAMLGLVALLGLWQGLVVATGVPGYVLPSPLAVVQALAAHHQLLWHHTGITVIEIVAGLFIGCLSGLLTALA LARFHGLRRTLLPILLISQAIPLFALAPILMLWLGYGMTAKIVMATLIIYFPVASTCYDGLRQTPQGWLDLAQTLGADRR RRLLRIQLPAALPALASGMRMAASAAPIGAVIGEWVGSSQGLGYLMLNANARMQVDLMFAALLILVTFGVALYFAMDALM RHLMPWHEDRTSAQG >Mature_254_residues TLLKRLWPAMLGLVALLGLWQGLVVATGVPGYVLPSPLAVVQALAAHHQLLWHHTGITVIEIVAGLFIGCLSGLLTALAL ARFHGLRRTLLPILLISQAIPLFALAPILMLWLGYGMTAKIVMATLIIYFPVASTCYDGLRQTPQGWLDLAQTLGADRRR RLLRIQLPAALPALASGMRMAASAAPIGAVIGEWVGSSQGLGYLMLNANARMQVDLMFAALLILVTFGVALYFAMDALMR HLMPWHEDRTSAQG
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=243, Percent_Identity=27.9835390946502, Blast_Score=98, Evalue=5e-22, Organism=Escherichia coli, GI87081802, Length=236, Percent_Identity=27.1186440677966, Blast_Score=81, Evalue=8e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 27535; Mature: 27403
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLKRLWPAMLGLVALLGLWQGLVVATGVPGYVLPSPLAVVQALAAHHQLLWHHTGITV CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHH IEIVAGLFIGCLSGLLTALALARFHGLRRTLLPILLISQAIPLFALAPILMLWLGYGMTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH KIVMATLIIYFPVASTCYDGLRQTPQGWLDLAQTLGADRRRRLLRIQLPAALPALASGMR HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHH MAASAAPIGAVIGEWVGSSQGLGYLMLNANARMQVDLMFAALLILVTFGVALYFAMDALM HHHHHCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RHLMPWHEDRTSAQG HHHCCCCCCCCCCCC >Mature Secondary Structure TLLKRLWPAMLGLVALLGLWQGLVVATGVPGYVLPSPLAVVQALAAHHQLLWHHTGITV CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHH IEIVAGLFIGCLSGLLTALALARFHGLRRTLLPILLISQAIPLFALAPILMLWLGYGMTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH KIVMATLIIYFPVASTCYDGLRQTPQGWLDLAQTLGADRRRRLLRIQLPAALPALASGMR HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHH MAASAAPIGAVIGEWVGSSQGLGYLMLNANARMQVDLMFAALLILVTFGVALYFAMDALM HHHHHCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RHLMPWHEDRTSAQG HHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]