| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is mpl [H]
Identifier: 92113659
GI number: 92113659
Start: 1747838
End: 1749208
Strand: Direct
Name: mpl [H]
Synonym: Csal_1535
Alternate gene names: 92113659
Gene position: 1747838-1749208 (Clockwise)
Preceding gene: 92113657
Following gene: 92113660
Centisome position: 47.28
GC content: 69.29
Gene sequence:
>1371_bases ATGCACGTCCATATTCTAGGGGTTTGCGGTACGTTCATGGGGAGTCTGGCGCGGTTGGCCAAGGCGCTCGGACATCAGGT CAGCGGTTCGGATGCCAACGTCTATCCGCCGATGAGCACTCAGCTCGAAGAGGCGGGCATCGCCCTTTGCGAGGGCTATG CCGCCGACAACCTGATGCCGCGTCCCGATCTCGTGATCATCGGCAATGCATTGTCGCGCGGCAACCCCGAGGTGGAGGCC GTGCTCAATGCCAAATTGCCCTACGTCTCGGGCCCGCAGTGGCTGGCCGAGCAGGTGCTGCCGGGCCGGCGCGTGGTGGC GGTGGCCGGCACTCACGGCAAGACCACGACCGCCAGTCTGCTGACGTGGATTCTGGAGGCGGCCGGCCAGGCGCCGGGGT TCTTGATCGGCGGGGTGCCGCGCAATCTGGGCGTGTCCTCGCGACTGGGAGAGCCCGGGGCGCCGTTCGTGGTCGAGGCC GATGAGTACGACACGGCCTTCTTCGACAAGCGTTCCAAGTTCGTCCACTACCGCCCGGATATCGCGGTGCTGGGCAACCT CGAGTTCGATCACGCGGACATCTTTCCCGACCTGGCCGCCATCGAGCGTCAGTTCCACCATCTGGTACGTACCGTCCCCG GGCAAGGGCAACTGGTGGTGGCGGCGGGCGAGCCCGCCCTCGAGCGCGTGCTGGCGCAAGGCTGCTGGAGCCCCGTCGTG CGTTTCGGTGCCAGCGACGACGCCTCATGGCAGTGGCGGCTGGAAAGCGCCGATGGCCGTCGCTTCGCGGTGCGTCATGG CGAGCGCGTCGCGCACGTCGACTGGGCGCTGAGCGGGCGTCACAACGTCGCCAACGCGGTGGCGGCCCTGGCTGCGGCGT CGGCCTGCGGTGTCGCCCTCGAGGCAGGGGCGGCGGCGCTGGCACGCTTCGAATCGCCGCGCCGACGCCAGGAGGTGCGA GGCGAGGTCGGCGGCATTCAGGTCATCGACGACTTCGCCCATCATCCCACGGCCATCGCCGCCACGCTCGAGGGGCTGGC AGCGGCGACCGACGCGGGGCGGCTGCTGGCGGTGATCGAACCGCGTTCCAATACGATGCGTCTGGGCAGCATGCGCGAGC GCTTGCCGGACAGCGTGGCGGCGGCGGACCGCGTCTGGTGGTATCGGCCACCGGAGGTCGAATGGTCGCTGGAGGCGCTT GCGGCGGCCTGTCCGGTGCCGGCGACGGTGAGCGACGAGATGCCGGCCCTGGTCGCGGCCATCGTGGCCGAGGCGCGTCC GGGAGACCGGATCGTGGTGATGTCGAACGGGGCGTTCGGCGGTATCCACGAAAAGTTGCTGGCGGCACTGGAGGCCCGGC ATGGCGGATGA
Upstream 100 bases:
>100_bases ATGATAGCCGACATCGACGGTCGATGCCTATGCCAGGGCGCTCGGCTGGTGGGTCGCGCGGCGCCATGCTAGGCTCGCCG CATCATGGCAGGAGGCTCAG
Downstream 100 bases:
>100_bases AGCAATGTTCGAAGCGCCTGTCACCGTGGCGTTGACGGGGGCATCCGGGGCGCAGTACGGGCTGCGGCTCATCGACTGCC TGGTGGCGGCGCGGCATCAG
Product: UDP-N-acetylmuramate
Products: NA
Alternate protein names: Murein peptide ligase [H]
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MHVHILGVCGTFMGSLARLAKALGHQVSGSDANVYPPMSTQLEEAGIALCEGYAADNLMPRPDLVIIGNALSRGNPEVEA VLNAKLPYVSGPQWLAEQVLPGRRVVAVAGTHGKTTTASLLTWILEAAGQAPGFLIGGVPRNLGVSSRLGEPGAPFVVEA DEYDTAFFDKRSKFVHYRPDIAVLGNLEFDHADIFPDLAAIERQFHHLVRTVPGQGQLVVAAGEPALERVLAQGCWSPVV RFGASDDASWQWRLESADGRRFAVRHGERVAHVDWALSGRHNVANAVAALAAASACGVALEAGAAALARFESPRRRQEVR GEVGGIQVIDDFAHHPTAIAATLEGLAAATDAGRLLAVIEPRSNTMRLGSMRERLPDSVAAADRVWWYRPPEVEWSLEAL AAACPVPATVSDEMPALVAAIVAEARPGDRIVVMSNGAFGGIHEKLLAALEARHGG
Sequences:
>Translated_456_residues MHVHILGVCGTFMGSLARLAKALGHQVSGSDANVYPPMSTQLEEAGIALCEGYAADNLMPRPDLVIIGNALSRGNPEVEA VLNAKLPYVSGPQWLAEQVLPGRRVVAVAGTHGKTTTASLLTWILEAAGQAPGFLIGGVPRNLGVSSRLGEPGAPFVVEA DEYDTAFFDKRSKFVHYRPDIAVLGNLEFDHADIFPDLAAIERQFHHLVRTVPGQGQLVVAAGEPALERVLAQGCWSPVV RFGASDDASWQWRLESADGRRFAVRHGERVAHVDWALSGRHNVANAVAALAAASACGVALEAGAAALARFESPRRRQEVR GEVGGIQVIDDFAHHPTAIAATLEGLAAATDAGRLLAVIEPRSNTMRLGSMRERLPDSVAAADRVWWYRPPEVEWSLEAL AAACPVPATVSDEMPALVAAIVAEARPGDRIVVMSNGAFGGIHEKLLAALEARHGG >Mature_456_residues MHVHILGVCGTFMGSLARLAKALGHQVSGSDANVYPPMSTQLEEAGIALCEGYAADNLMPRPDLVIIGNALSRGNPEVEA VLNAKLPYVSGPQWLAEQVLPGRRVVAVAGTHGKTTTASLLTWILEAAGQAPGFLIGGVPRNLGVSSRLGEPGAPFVVEA DEYDTAFFDKRSKFVHYRPDIAVLGNLEFDHADIFPDLAAIERQFHHLVRTVPGQGQLVVAAGEPALERVLAQGCWSPVV RFGASDDASWQWRLESADGRRFAVRHGERVAHVDWALSGRHNVANAVAALAAASACGVALEAGAAALARFESPRRRQEVR GEVGGIQVIDDFAHHPTAIAATLEGLAAATDAGRLLAVIEPRSNTMRLGSMRERLPDSVAAADRVWWYRPPEVEWSLEAL AAACPVPATVSDEMPALVAAIVAEARPGDRIVVMSNGAFGGIHEKLLAALEARHGG
Specific function: Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N-acetylmuramic acid [H]
COG id: COG0773
COG function: function code M; UDP-N-acetylmuramate-alanine ligase
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family [H]
Homologues:
Organism=Escherichia coli, GI1790680, Length=455, Percent_Identity=55.1648351648352, Blast_Score=491, Evalue=1e-140, Organism=Escherichia coli, GI1786279, Length=378, Percent_Identity=30.6878306878307, Blast_Score=130, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR005757 - InterPro: IPR016040 [H]
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: 6.3.2.- [C]
Molecular weight: Translated: 48382; Mature: 48382
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHVHILGVCGTFMGSLARLAKALGHQVSGSDANVYPPMSTQLEEAGIALCEGYAADNLMP CEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCCCCCCC RPDLVIIGNALSRGNPEVEAVLNAKLPYVSGPQWLAEQVLPGRRVVAVAGTHGKTTTASL CCCEEEEECHHCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCEEEEEECCCCCHHHHHH LTWILEAAGQAPGFLIGGVPRNLGVSSRLGEPGAPFVVEADEYDTAFFDKRSKFVHYRPD HHHHHHHCCCCCCEEECCCCCCCCCHHCCCCCCCCEEEECCCCCHHHHHCCCCEEEECCC IAVLGNLEFDHADIFPDLAAIERQFHHLVRTVPGQGQLVVAAGEPALERVLAQGCWSPVV EEEEECCCCCHHHHCHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHH RFGASDDASWQWRLESADGRRFAVRHGERVAHVDWALSGRHNVANAVAALAAASACGVAL HCCCCCCCCEEEEEECCCCCEEEEECCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHH EAGAAALARFESPRRRQEVRGEVGGIQVIDDFAHHPTAIAATLEGLAAATDAGRLLAVIE HHHHHHHHHHCCHHHHHHHCCCCCCEEEEHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEC PRSNTMRLGSMRERLPDSVAAADRVWWYRPPEVEWSLEALAAACPVPATVSDEMPALVAA CCCCCEEHHHHHHHCCHHHHHHHCEEECCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHH IVAEARPGDRIVVMSNGAFGGIHEKLLAALEARHGG HHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MHVHILGVCGTFMGSLARLAKALGHQVSGSDANVYPPMSTQLEEAGIALCEGYAADNLMP CEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCCCCCCC RPDLVIIGNALSRGNPEVEAVLNAKLPYVSGPQWLAEQVLPGRRVVAVAGTHGKTTTASL CCCEEEEECHHCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCEEEEEECCCCCHHHHHH LTWILEAAGQAPGFLIGGVPRNLGVSSRLGEPGAPFVVEADEYDTAFFDKRSKFVHYRPD HHHHHHHCCCCCCEEECCCCCCCCCHHCCCCCCCCEEEECCCCCHHHHHCCCCEEEECCC IAVLGNLEFDHADIFPDLAAIERQFHHLVRTVPGQGQLVVAAGEPALERVLAQGCWSPVV EEEEECCCCCHHHHCHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHH RFGASDDASWQWRLESADGRRFAVRHGERVAHVDWALSGRHNVANAVAALAAASACGVAL HCCCCCCCCEEEEEECCCCCEEEEECCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHH EAGAAALARFESPRRRQEVRGEVGGIQVIDDFAHHPTAIAATLEGLAAATDAGRLLAVIE HHHHHHHHHHCCHHHHHHHCCCCCCEEEEHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEC PRSNTMRLGSMRERLPDSVAAADRVWWYRPPEVEWSLEALAAACPVPATVSDEMPALVAA CCCCCEEHHHHHHHCCHHHHHHHCEEECCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHH IVAEARPGDRIVVMSNGAFGGIHEKLLAALEARHGG HHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503; 2843822; 7984428; 8808921 [H]