| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is yrbG [C]
Identifier: 92113623
GI number: 92113623
Start: 1700064
End: 1701083
Strand: Direct
Name: yrbG [C]
Synonym: Csal_1499
Alternate gene names: 92113623
Gene position: 1700064-1701083 (Clockwise)
Preceding gene: 92113622
Following gene: 92113631
Centisome position: 45.99
GC content: 67.16
Gene sequence:
>1020_bases ATGAGCTTGACACTTAGCGTGGCGCTATTCGCGGGATGCGCGCTGATCATCGGACTGGTCGGGACGCGCTTGACCGGCGT GGTGGACACGCTCGCCGACCGCACCGGAATGGGCGAGGCGATCGCCGGGGCCGTGCTGATGGGCATGGCGACCTCGCTGT CCGGCATCGTGCTGTCGGTCACGGCGGCCTGGAAGGGGCAACCCGAGTTGGCGATGAGCAACGCCGTGGGCGGGATCGCC GTCCAGACGCTGTTCCTCACCGTCGCCGATGTGGCGCTGCGGCGCATCAACCTCGAGCATGCGGCGGCGTCCATCGGCAA TCTTGCCCAGGGCACGCTGCTGATGTGCCTGCTCGGCCTGTTGCTGGTGGCCAGTTTCTCGCCGGAATGGACCTTGTGGA GCATTCATCCCGTTACGCCGATCCTGCTGCTCGGGTACGTGTACGGGTTGCGCATCATCGACGAGGTCCGCAGCGAGCCG ATGTGGATGCCCCGGCGCACGCGCGAAACCCGCGAGGATACGCCGGATGACGAGGCCAGGCGCCATTCGTTGACGCGACT ATGGGGCGCGTTCGTGGTCCTGGCCTTGCTGCTGGGCATCTCCGGCTGGGTGATGGAAAAAGCGGCCACGACCCTGGCGG CGGAAACGGGCATGAGCCAGACCGCCGTGGGGGTGTTGCTGACCTCGGTCGCGACGTCGTTGCCCGAGTTGGTGACCGCC GTGGCCGCCGTGAAGCGTGGCGCGCTGACCCTGGCGGTGGGCGGCATCATCGGCGGCAACGCCTTCGATACCCTGTTTGC CGCCGCCTCGGACGTCGCCTATCGTGATGGCTCGATCTATCATGCGGTCTCCGACCAGACCCTGCTGTGGATCGCGCTCT CGGTCTTGATGACGGCCGTCCTGCTGCTGGGGCTGGTGCGTCGCGAGAAGCACGGTCCGGCACGCATCGGCTTCGAGAGC GTGGCCCTGGTACTGCTGTACGGGGCGGGCGTGGCGATGGTCTTCCAGGATGCCTCCTGA
Upstream 100 bases:
>100_bases GCCGCGCTGGTGGCGGATAACGTCGAGCGTTGACGAGGGCAATAGCCAGCCGCGCCAGGCTCCGCTAGGGTAGGGCGCAA ATGTCTCAGGGAAGAGTGAT
Downstream 100 bases:
>100_bases GCATGCCTTGCGGCGATCCGCTCAGTCGAACAAGTCGCCCTGGGCATGCGGGGCGCGAAACGCGCTGGTGTCGAGTCCCA TCTCGGTACGGCTCCCGATG
Product: sodium/calcium exchanger membrane protein
Products: Na (I) [Cytoplasm]; Ca (II) [Periplasm] [C]
Alternate protein names: Cation Antiporter; Cation Transporter; Sodium/Calcium Antiporter; Sodium/Calcium Exchanger Protein; Ca2+Cation Antiporter CaCA Family; Ca2+/Na+ Antiporter; Ca2+/H+ Antiporter
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MSLTLSVALFAGCALIIGLVGTRLTGVVDTLADRTGMGEAIAGAVLMGMATSLSGIVLSVTAAWKGQPELAMSNAVGGIA VQTLFLTVADVALRRINLEHAAASIGNLAQGTLLMCLLGLLLVASFSPEWTLWSIHPVTPILLLGYVYGLRIIDEVRSEP MWMPRRTRETREDTPDDEARRHSLTRLWGAFVVLALLLGISGWVMEKAATTLAAETGMSQTAVGVLLTSVATSLPELVTA VAAVKRGALTLAVGGIIGGNAFDTLFAAASDVAYRDGSIYHAVSDQTLLWIALSVLMTAVLLLGLVRREKHGPARIGFES VALVLLYGAGVAMVFQDAS
Sequences:
>Translated_339_residues MSLTLSVALFAGCALIIGLVGTRLTGVVDTLADRTGMGEAIAGAVLMGMATSLSGIVLSVTAAWKGQPELAMSNAVGGIA VQTLFLTVADVALRRINLEHAAASIGNLAQGTLLMCLLGLLLVASFSPEWTLWSIHPVTPILLLGYVYGLRIIDEVRSEP MWMPRRTRETREDTPDDEARRHSLTRLWGAFVVLALLLGISGWVMEKAATTLAAETGMSQTAVGVLLTSVATSLPELVTA VAAVKRGALTLAVGGIIGGNAFDTLFAAASDVAYRDGSIYHAVSDQTLLWIALSVLMTAVLLLGLVRREKHGPARIGFES VALVLLYGAGVAMVFQDAS >Mature_338_residues SLTLSVALFAGCALIIGLVGTRLTGVVDTLADRTGMGEAIAGAVLMGMATSLSGIVLSVTAAWKGQPELAMSNAVGGIAV QTLFLTVADVALRRINLEHAAASIGNLAQGTLLMCLLGLLLVASFSPEWTLWSIHPVTPILLLGYVYGLRIIDEVRSEPM WMPRRTRETREDTPDDEARRHSLTRLWGAFVVLALLLGISGWVMEKAATTLAAETGMSQTAVGVLLTSVATSLPELVTAV AAVKRGALTLAVGGIIGGNAFDTLFAAASDVAYRDGSIYHAVSDQTLLWIALSVLMTAVLLLGLVRREKHGPARIGFESV ALVLLYGAGVAMVFQDAS
Specific function: Unknown
COG id: COG0530
COG function: function code P; Ca2+/Na+ antiporter
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35554; Mature: 35423
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTLSVALFAGCALIIGLVGTRLTGVVDTLADRTGMGEAIAGAVLMGMATSLSGIVLSV CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEE TAAWKGQPELAMSNAVGGIAVQTLFLTVADVALRRINLEHAAASIGNLAQGTLLMCLLGL EECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LLVASFSPEWTLWSIHPVTPILLLGYVYGLRIIDEVRSEPMWMPRRTRETREDTPDDEAR HHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCHHHH RHSLTRLWGAFVVLALLLGISGWVMEKAATTLAAETGMSQTAVGVLLTSVATSLPELVTA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH VAAVKRGALTLAVGGIIGGNAFDTLFAAASDVAYRDGSIYHAVSDQTLLWIALSVLMTAV HHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHH LLLGLVRREKHGPARIGFESVALVLLYGAGVAMVFQDAS HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEEEECCC >Mature Secondary Structure SLTLSVALFAGCALIIGLVGTRLTGVVDTLADRTGMGEAIAGAVLMGMATSLSGIVLSV CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEE TAAWKGQPELAMSNAVGGIAVQTLFLTVADVALRRINLEHAAASIGNLAQGTLLMCLLGL EECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LLVASFSPEWTLWSIHPVTPILLLGYVYGLRIIDEVRSEPMWMPRRTRETREDTPDDEAR HHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCHHHH RHSLTRLWGAFVVLALLLGISGWVMEKAATTLAAETGMSQTAVGVLLTSVATSLPELVTA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH VAAVKRGALTLAVGGIIGGNAFDTLFAAASDVAYRDGSIYHAVSDQTLLWIALSVLMTAV HHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHH LLLGLVRREKHGPARIGFESVALVLLYGAGVAMVFQDAS HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Na (I) [Periplasm]; Ca (II) [Cytoplasm] [C]
Specific reaction: Na (I) [Periplasm] + Ca (II) [Cytoplasm] = Na (I) [Cytoplasm] + Ca (II) [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA