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The map label for this gene is 92113622

Identifier: 92113622

GI number: 92113622

Start: 1697715

End: 1700036

Strand: Direct

Name: 92113622

Synonym: Csal_1498

Alternate gene names: NA

Gene position: 1697715-1700036 (Clockwise)

Preceding gene: 92113621

Following gene: 92113623

Centisome position: 45.93

GC content: 67.01

Gene sequence:

>2322_bases
ATGACCACGGCGGCGGACTACACCGTGGCGGTACGCGCCTTGTGCGACTTCACGGCCAAGCGCGGCGACCTCGACCTGCG
TTTCACGCCCTCGCCCAGCGCGGAAGAGGGCATCGAAGGCCATGCGCGAGTCGCCGCGCGACGCGAGGCACACTATCAGC
GCGAAATTTCCTTGAGCGGCCTTTACCGGAGCGCGTCGGGGCATCGATTGCGCGTGCGGGGGCGTGCCGACGGGTACGAT
CCGCGGCGCCAGCGTCTCGAGGAAATCAAGACGCATCGCGGCGATCTGGCGCGTCAGCCGGAGAACCACCGGCATCTGCA
CTGGGCGCAATTGCATCTTTATGGCTGGCTGCTGTGCGAGGCGCACGAGCTCGAGACGCTCGAGCTGGCATTGGTGTATT
TCGACGTCGCCCGCCAGGTCGAGACGCCGCTCGTCCAGCGCATGAGCCGCGCCGCGCTGTACGATGTCTTCGTGACCCAC
TGCGAGGCGTTTCTCGACTGGGCGTTGCGTGAAACGGCGCATCGCGAGGCACGCGATCGGGCCCTCGAGACCTTGCGCTT
TCCGTTCGCGGACTGGCAAGGCGAGCAACGCGCACTGGCCGAAAACGTCTACAAGGCGGCCAGCACCGGGCGTTGCCTGC
TGGCCCAGGCGCCCACCGGGACCGGCAAGACCCTGGGCACGCTCTTTCCGATGCTCAAGGCCATGCCCCGGCAACGGCTC
GATGGCCTGTGCTATCTCGCCGCCAAGACGCCCGGCCGCCAACTGGCGCTGGATGCGCTGGCACCGCTTGTCGCGCCGAC
ACCGCTGCGTGTGCTGGAACTCACCGCCCGCGACAAGGCATGCGAGCATCCCGACCGCGCCTGTCACGGCGAGTCCTGTC
CGCTGGCGGCGGGGTTTTTCGACAAGCTGCCCGCCGCGCGTCGCGCGGTGATCGAGCACGGCTGGTGGGATCGTGCGCGC
CTGCGCGAGATCGCGCTGGCCCATGACGTGTGCCCGTATTATCTGGGCCAGGAAATGGCGCGCTGGAGCGATGTGAGCGT
CGCCGACTATCACTACTATTTCGACACCGGCGGCCTGCTGCATGCCTTGTCCCAGGCCAATGACTGGCGCCTTGGCGTGC
TCGTCGACGAGGCGCACAACCTGGTCGAGCGTGCGCGCGACATGTACAGCGCCACGCTCGATCAGGGAGATCTGCGTGCC
CTGATACGCGAGAAGCCCGCCGGCGTCACCGCCGCGCTCAAGCAGCTCAATCGCGAATGGAATGCACTGGGGCGCGAGTG
CGAGGCCGAGCACTGCCCGTTGCCCGAGATCCCCGGCGACTGGCTGTCGGCGCTCCATCGGCTGATCGGCACCATCGGCC
AGGTGGCGAGCGAACCGCCCTACACGCTGTCGCCGACCTTGCAGCGTTTTTACTTCGATGCCTTGAAGATGGCTCGCATC
GCCGAGCGCTTCGACCGGCATTTCGTCTGTGACATCACCCTGCGCCAGGGCGCACGCGGCCTGCGTCATGCGCGCTTGAG
CCTGCGCAATCTCGTGCCGGCGTCGATGCTGGCACCTCGCTTCGCGGCAGCCCATGCCAGCGTGCTGTTCTCGGCCACTC
TGACGCCGTCGCGCTATCAGCGCGACTTGCTCGGGCTGCCCGGGGACAGCGTGTGGCAGGAAGTGGATTCGCCCTTCGCC
AGCGATCAGCTCGAGGTGCGCATCGCGCGACACATCTCGACCCGGTTTCACGAGCGTCAGGCCTCGTTGACGCCCATTGC
GGCGTTGATCGCCGAGACCTATGCCCGTCGCCCGGGCAATTATCTGGCCTTTTTCAGCAGCTTCGCCTACCTGGAGGACG
TGGTGGCGCAACTGCGCGAACATCATCCCGAAGTGCCGCACTGGCAGCAGTCGCGCGGCATGGATGAAGCGGCGCGGCAC
GCGTTTCTGGCACGTTTCACGCCTCACGGGCAGGGCGTGGGGTTCGCGGTATTGGGTGGGGCCTTCGGCGAGGGGATCGA
CCTGCCCGGCGAGCGGCTGGTCGGTGCCTTCATCGCCACGCTGGGACTGCCGCAGGTCAATCCCGTCAACGAGCAGCGGC
GCCGCTTCATGCAGACGATGTTCGGCGCCGGCTACGACTACGCCTATCTCTACCCCGGCATCCAGAAGGTGATCCAGGCC
GCCGGGCGTGTCATTCGCGGGCGCGAGGATCGAGGCACGATCCACTTGATCGATGATCGCTTCGACCAGCCACGGGTGCG
GGCCTTGTTGCCGCGCTGGTGGCGGATAACGTCGAGCGTTGACGAGGGCAATAGCCAGCCGCGCCAGGCTCCGCTAGGGT
AG

Upstream 100 bases:

>100_bases
AGGGCCCCGGGGATCGCCTGCAGGACAATCAGCGCCGCTGGCTGGCATTCTGCGCGCGGCACGCCATGCCGGTGGATGTC
TGCTATGTGACCTGGGCGTC

Downstream 100 bases:

>100_bases
GGCGCAAATGTCTCAGGGAAGAGTGATATGAGCTTGACACTTAGCGTGGCGCTATTCGCGGGATGCGCGCTGATCATCGG
ACTGGTCGGGACGCGCTTGA

Product: helicase c2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 773; Mature: 772

Protein sequence:

>773_residues
MTTAADYTVAVRALCDFTAKRGDLDLRFTPSPSAEEGIEGHARVAARREAHYQREISLSGLYRSASGHRLRVRGRADGYD
PRRQRLEEIKTHRGDLARQPENHRHLHWAQLHLYGWLLCEAHELETLELALVYFDVARQVETPLVQRMSRAALYDVFVTH
CEAFLDWALRETAHREARDRALETLRFPFADWQGEQRALAENVYKAASTGRCLLAQAPTGTGKTLGTLFPMLKAMPRQRL
DGLCYLAAKTPGRQLALDALAPLVAPTPLRVLELTARDKACEHPDRACHGESCPLAAGFFDKLPAARRAVIEHGWWDRAR
LREIALAHDVCPYYLGQEMARWSDVSVADYHYYFDTGGLLHALSQANDWRLGVLVDEAHNLVERARDMYSATLDQGDLRA
LIREKPAGVTAALKQLNREWNALGRECEAEHCPLPEIPGDWLSALHRLIGTIGQVASEPPYTLSPTLQRFYFDALKMARI
AERFDRHFVCDITLRQGARGLRHARLSLRNLVPASMLAPRFAAAHASVLFSATLTPSRYQRDLLGLPGDSVWQEVDSPFA
SDQLEVRIARHISTRFHERQASLTPIAALIAETYARRPGNYLAFFSSFAYLEDVVAQLREHHPEVPHWQQSRGMDEAARH
AFLARFTPHGQGVGFAVLGGAFGEGIDLPGERLVGAFIATLGLPQVNPVNEQRRRFMQTMFGAGYDYAYLYPGIQKVIQA
AGRVIRGREDRGTIHLIDDRFDQPRVRALLPRWWRITSSVDEGNSQPRQAPLG

Sequences:

>Translated_773_residues
MTTAADYTVAVRALCDFTAKRGDLDLRFTPSPSAEEGIEGHARVAARREAHYQREISLSGLYRSASGHRLRVRGRADGYD
PRRQRLEEIKTHRGDLARQPENHRHLHWAQLHLYGWLLCEAHELETLELALVYFDVARQVETPLVQRMSRAALYDVFVTH
CEAFLDWALRETAHREARDRALETLRFPFADWQGEQRALAENVYKAASTGRCLLAQAPTGTGKTLGTLFPMLKAMPRQRL
DGLCYLAAKTPGRQLALDALAPLVAPTPLRVLELTARDKACEHPDRACHGESCPLAAGFFDKLPAARRAVIEHGWWDRAR
LREIALAHDVCPYYLGQEMARWSDVSVADYHYYFDTGGLLHALSQANDWRLGVLVDEAHNLVERARDMYSATLDQGDLRA
LIREKPAGVTAALKQLNREWNALGRECEAEHCPLPEIPGDWLSALHRLIGTIGQVASEPPYTLSPTLQRFYFDALKMARI
AERFDRHFVCDITLRQGARGLRHARLSLRNLVPASMLAPRFAAAHASVLFSATLTPSRYQRDLLGLPGDSVWQEVDSPFA
SDQLEVRIARHISTRFHERQASLTPIAALIAETYARRPGNYLAFFSSFAYLEDVVAQLREHHPEVPHWQQSRGMDEAARH
AFLARFTPHGQGVGFAVLGGAFGEGIDLPGERLVGAFIATLGLPQVNPVNEQRRRFMQTMFGAGYDYAYLYPGIQKVIQA
AGRVIRGREDRGTIHLIDDRFDQPRVRALLPRWWRITSSVDEGNSQPRQAPLG
>Mature_772_residues
TTAADYTVAVRALCDFTAKRGDLDLRFTPSPSAEEGIEGHARVAARREAHYQREISLSGLYRSASGHRLRVRGRADGYDP
RRQRLEEIKTHRGDLARQPENHRHLHWAQLHLYGWLLCEAHELETLELALVYFDVARQVETPLVQRMSRAALYDVFVTHC
EAFLDWALRETAHREARDRALETLRFPFADWQGEQRALAENVYKAASTGRCLLAQAPTGTGKTLGTLFPMLKAMPRQRLD
GLCYLAAKTPGRQLALDALAPLVAPTPLRVLELTARDKACEHPDRACHGESCPLAAGFFDKLPAARRAVIEHGWWDRARL
REIALAHDVCPYYLGQEMARWSDVSVADYHYYFDTGGLLHALSQANDWRLGVLVDEAHNLVERARDMYSATLDQGDLRAL
IREKPAGVTAALKQLNREWNALGRECEAEHCPLPEIPGDWLSALHRLIGTIGQVASEPPYTLSPTLQRFYFDALKMARIA
ERFDRHFVCDITLRQGARGLRHARLSLRNLVPASMLAPRFAAAHASVLFSATLTPSRYQRDLLGLPGDSVWQEVDSPFAS
DQLEVRIARHISTRFHERQASLTPIAALIAETYARRPGNYLAFFSSFAYLEDVVAQLREHHPEVPHWQQSRGMDEAARHA
FLARFTPHGQGVGFAVLGGAFGEGIDLPGERLVGAFIATLGLPQVNPVNEQRRRFMQTMFGAGYDYAYLYPGIQKVIQAA
GRVIRGREDRGTIHLIDDRFDQPRVRALLPRWWRITSSVDEGNSQPRQAPLG

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010614
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR001650 [H]

Pfam domain/function: PF06733 DEAD_2 [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 87086; Mature: 86955

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTAADYTVAVRALCDFTAKRGDLDLRFTPSPSAEEGIEGHARVAARREAHYQREISLSG
CCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHH
LYRSASGHRLRVRGRADGYDPRRQRLEEIKTHRGDLARQPENHRHLHWAQLHLYGWLLCE
HHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCEEHHHHHHHHHHHCC
AHELETLELALVYFDVARQVETPLVQRMSRAALYDVFVTHCEAFLDWALRETAHREARDR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALETLRFPFADWQGEQRALAENVYKAASTGRCLLAQAPTGTGKTLGTLFPMLKAMPRQRL
HHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHC
DGLCYLAAKTPGRQLALDALAPLVAPTPLRVLELTARDKACEHPDRACHGESCPLAAGFF
CCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHEEHHHHHCCCCCCCCCCCCCCCCCHHHH
DKLPAARRAVIEHGWWDRARLREIALAHDVCPYYLGQEMARWSDVSVADYHYYFDTGGLL
HHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHH
HALSQANDWRLGVLVDEAHNLVERARDMYSATLDQGDLRALIREKPAGVTAALKQLNREW
HHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHH
NALGRECEAEHCPLPEIPGDWLSALHRLIGTIGQVASEPPYTLSPTLQRFYFDALKMARI
HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
AERFDRHFVCDITLRQGARGLRHARLSLRNLVPASMLAPRFAAAHASVLFSATLTPSRYQ
HHHHCCCEEEEEEHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH
RDLLGLPGDSVWQEVDSPFASDQLEVRIARHISTRFHERQASLTPIAALIAETYARRPGN
HHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC
YLAFFSSFAYLEDVVAQLREHHPEVPHWQQSRGMDEAARHAFLARFTPHGQGVGFAVLGG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHCCCCCCCCCCEEECC
AFGEGIDLPGERLVGAFIATLGLPQVNPVNEQRRRFMQTMFGAGYDYAYLYPGIQKVIQA
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AGRVIRGREDRGTIHLIDDRFDQPRVRALLPRWWRITSSVDEGNSQPRQAPLG
HHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCHHCCCCCCCCCCCC
>Mature Secondary Structure 
TTAADYTVAVRALCDFTAKRGDLDLRFTPSPSAEEGIEGHARVAARREAHYQREISLSG
CCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHH
LYRSASGHRLRVRGRADGYDPRRQRLEEIKTHRGDLARQPENHRHLHWAQLHLYGWLLCE
HHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCEEHHHHHHHHHHHCC
AHELETLELALVYFDVARQVETPLVQRMSRAALYDVFVTHCEAFLDWALRETAHREARDR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALETLRFPFADWQGEQRALAENVYKAASTGRCLLAQAPTGTGKTLGTLFPMLKAMPRQRL
HHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHC
DGLCYLAAKTPGRQLALDALAPLVAPTPLRVLELTARDKACEHPDRACHGESCPLAAGFF
CCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHEEHHHHHCCCCCCCCCCCCCCCCCHHHH
DKLPAARRAVIEHGWWDRARLREIALAHDVCPYYLGQEMARWSDVSVADYHYYFDTGGLL
HHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHH
HALSQANDWRLGVLVDEAHNLVERARDMYSATLDQGDLRALIREKPAGVTAALKQLNREW
HHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHH
NALGRECEAEHCPLPEIPGDWLSALHRLIGTIGQVASEPPYTLSPTLQRFYFDALKMARI
HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
AERFDRHFVCDITLRQGARGLRHARLSLRNLVPASMLAPRFAAAHASVLFSATLTPSRYQ
HHHHCCCEEEEEEHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH
RDLLGLPGDSVWQEVDSPFASDQLEVRIARHISTRFHERQASLTPIAALIAETYARRPGN
HHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC
YLAFFSSFAYLEDVVAQLREHHPEVPHWQQSRGMDEAARHAFLARFTPHGQGVGFAVLGG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHCCCCCCCCCCEEECC
AFGEGIDLPGERLVGAFIATLGLPQVNPVNEQRRRFMQTMFGAGYDYAYLYPGIQKVIQA
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AGRVIRGREDRGTIHLIDDRFDQPRVRALLPRWWRITSSVDEGNSQPRQAPLG
HHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11029001 [H]