| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
Click here to switch to the map view.
The map label for this gene is sphX [H]
Identifier: 92113600
GI number: 92113600
Start: 1675742
End: 1676767
Strand: Direct
Name: sphX [H]
Synonym: Csal_1476
Alternate gene names: 92113600
Gene position: 1675742-1676767 (Clockwise)
Preceding gene: 92113599
Following gene: 92113601
Centisome position: 45.33
GC content: 61.89
Gene sequence:
>1026_bases ATGAACCGTATCCTCAAGACTACCGCGTTGGCCGCTGCCGTGATGAGCGTCGCAGGCGTTGCCCAGGCGCAGGACGAAAC ACGCGAGCAGCTACGCATCGTCGGTTCCAGCACCGTCTATCCGTTCGCCAGCTACGTCGTCGAGGAGTTCGGCGCGACCA CCGATTACCCGACACCCGTCATCGAATCCACGGGGTCCGGCGGCGGTCTGCGCTTGTTCTGCAATGGGGTCGGGCTGGAC ACGCCGGACATCACCAACGCCTCGCGCCGCATGAAGCCCTCCGAGTTCGAGCGTTGCCAGGAAAACGGCGTGACCGACAT CACCGAAGCCAAGATCGGTTACGACGGTATCGCGTTCGCCGAGTCCAACACCAACGAGCCGGTCAACTTCACGCGTGAGC AGCTGTTCCTCGCGCTGGCCGCCAAGGTGCCCCAGGACGGCGAACTGGTCGACAACCCCTACACCAAGTGGAGCGATATC GACTCCTCGCTGCCGGATCGCGAGATCATGGTGTATGGTCCGCCGACCACTTCCGGCACGCGTGATGCCTTCGAGGAGCT GGTGATGGAAGCCGCTTCCGAAGAGATGGACGCCTACGGCGGTGAAGGCTACACCGACATCCGTCAGGACGGCCCCTACG TCGACGCCGGCGAGAACGACAACCTCATCGTTCAGCGTCTCCAGGAAAACACCACGGCATTCGGTATCTTCGGGTATTCC TTCCTCGAAGAGAACGCCGACTCCCTGACCGCCGCGAGCATCGATGGTGTGGAACCCGAGCCCGAAGCCATCAGCTCCGG TGAATATCCGGTGTCGCGCTCACTTTTCTTCTACGTTAAGAACCAGCATGCCGATAGCGTGCCGGCCATGTACCCCTACG TCGACCTGTTCATGAGCGAGCAGATGATCAGCCCGATGGGCTACCTCAAGGGCCTGGGTCTGATCCCGCTGCCCGAGGAC GCACGCGAGCAGGCGCGCAGCGATGTCGAAAATCGCGAGAGTCTCGAACTCAGCGACCTGAAGTAA
Upstream 100 bases:
>100_bases CGGAGTGACATTCGTCATCTTTTGTCATGAAGCTGTCATCTTCATTGGGCATCTTAGGTGTCGCGAAGGTTGAACACTCT CATCGACAGGAGTTACCCGC
Downstream 100 bases:
>100_bases GGCCGTAAGCGGTCCGATGAAGTGGCCGGCGGCTTTTGCCGCCGGCCCATTTGCGTGACGAGCCCTACGGGGTTGATGGC TCCCACCGGGAGCAACGTTA
Product: periplasmic phosphate binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MNRILKTTALAAAVMSVAGVAQAQDETREQLRIVGSSTVYPFASYVVEEFGATTDYPTPVIESTGSGGGLRLFCNGVGLD TPDITNASRRMKPSEFERCQENGVTDITEAKIGYDGIAFAESNTNEPVNFTREQLFLALAAKVPQDGELVDNPYTKWSDI DSSLPDREIMVYGPPTTSGTRDAFEELVMEAASEEMDAYGGEGYTDIRQDGPYVDAGENDNLIVQRLQENTTAFGIFGYS FLEENADSLTAASIDGVEPEPEAISSGEYPVSRSLFFYVKNQHADSVPAMYPYVDLFMSEQMISPMGYLKGLGLIPLPED AREQARSDVENRESLELSDLK
Sequences:
>Translated_341_residues MNRILKTTALAAAVMSVAGVAQAQDETREQLRIVGSSTVYPFASYVVEEFGATTDYPTPVIESTGSGGGLRLFCNGVGLD TPDITNASRRMKPSEFERCQENGVTDITEAKIGYDGIAFAESNTNEPVNFTREQLFLALAAKVPQDGELVDNPYTKWSDI DSSLPDREIMVYGPPTTSGTRDAFEELVMEAASEEMDAYGGEGYTDIRQDGPYVDAGENDNLIVQRLQENTTAFGIFGYS FLEENADSLTAASIDGVEPEPEAISSGEYPVSRSLFFYVKNQHADSVPAMYPYVDLFMSEQMISPMGYLKGLGLIPLPED AREQARSDVENRESLELSDLK >Mature_341_residues MNRILKTTALAAAVMSVAGVAQAQDETREQLRIVGSSTVYPFASYVVEEFGATTDYPTPVIESTGSGGGLRLFCNGVGLD TPDITNASRRMKPSEFERCQENGVTDITEAKIGYDGIAFAESNTNEPVNFTREQLFLALAAKVPQDGELVDNPYTKWSDI DSSLPDREIMVYGPPTTSGTRDAFEELVMEAASEEMDAYGGEGYTDIRQDGPYVDAGENDNLIVQRLQENTTAFGIFGYS FLEENADSLTAASIDGVEPEPEAISSGEYPVSRSLFFYVKNQHADSVPAMYPYVDLFMSEQMISPMGYLKGLGLIPLPED AREQARSDVENRESLELSDLK
Specific function: May be involved in the system for phosphate transport across the cytoplasmic membrane [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37290; Mature: 37290
Theoretical pI: Translated: 3.91; Mature: 3.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRILKTTALAAAVMSVAGVAQAQDETREQLRIVGSSTVYPFASYVVEEFGATTDYPTPV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCH IESTGSGGGLRLFCNGVGLDTPDITNASRRMKPSEFERCQENGVTDITEAKIGYDGIAFA HCCCCCCCCEEEEECCCCCCCCCCCCHHHCCCHHHHHHHHHCCCCCHHHHHCCCCCEEEE ESNTNEPVNFTREQLFLALAAKVPQDGELVDNPYTKWSDIDSSLPDREIMVYGPPTTSGT CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCEEEEECCCCCCCH RDAFEELVMEAASEEMDAYGGEGYTDIRQDGPYVDAGENDNLIVQRLQENTTAFGIFGYS HHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCEECCCCCCCHHHHHHHHCCCEEEEHHHH FLEENADSLTAASIDGVEPEPEAISSGEYPVSRSLFFYVKNQHADSVPAMYPYVDLFMSE HHHCCCCCEEEEECCCCCCCCHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHH QMISPMGYLKGLGLIPLPEDAREQARSDVENRESLELSDLK HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MNRILKTTALAAAVMSVAGVAQAQDETREQLRIVGSSTVYPFASYVVEEFGATTDYPTPV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCH IESTGSGGGLRLFCNGVGLDTPDITNASRRMKPSEFERCQENGVTDITEAKIGYDGIAFA HCCCCCCCCEEEEECCCCCCCCCCCCHHHCCCHHHHHHHHHCCCCCHHHHHCCCCCEEEE ESNTNEPVNFTREQLFLALAAKVPQDGELVDNPYTKWSDIDSSLPDREIMVYGPPTTSGT CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCEEEEECCCCCCCH RDAFEELVMEAASEEMDAYGGEGYTDIRQDGPYVDAGENDNLIVQRLQENTTAFGIFGYS HHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCEECCCCCCCHHHHHHHHCCCEEEEHHHH FLEENADSLTAASIDGVEPEPEAISSGEYPVSRSLFFYVKNQHADSVPAMYPYVDLFMSE HHHCCCCCEEEEECCCCCCCCHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHH QMISPMGYLKGLGLIPLPEDAREQARSDVENRESLELSDLK HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]