| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is yhiN [H]
Identifier: 92113565
GI number: 92113565
Start: 1632863
End: 1634047
Strand: Direct
Name: yhiN [H]
Synonym: Csal_1441
Alternate gene names: 92113565
Gene position: 1632863-1634047 (Clockwise)
Preceding gene: 92113562
Following gene: 92113566
Centisome position: 44.17
GC content: 68.02
Gene sequence:
>1185_bases ATGGCACAGACGTATGACGTAGTGGTGATCGGTGCCGGCGCGGCGGGACTGATGTGCGCGTCGACCGCAGGATACGCGGG GCGCCGCGTCCTGGTGCTCGACCATGCCAACAAGGCGGGCAAGAAGATCCTCATGTCCGGCGGGGGGCGCTGCAACTTCA CCAACCTGGCGACGGGGCCGGCGAATTTCTTCTCGGCCAACCCGCATTTCTGCATCTCCGCGCTCAAGCGGTATACGCCG GGTCACTTCGTCGAGCTCGTCGAGCGCCACGCCATCGAGTATGTCGAGAAGGCGCCGGGCCAGTTGTTCTGTGCCGACTC GGCCAAGCAGGTGGTGGCCATGCTGCTGACCGAGTGCGAGTGGGCCGGGGCGGAGGTGCGCCTCAAGACCCGGGTCGACT CGCTCGAACGCCATGGCGAAGGCATGCGCCTGGCTACGTCCAGTGGCCCGATCGACGCCGGCACGGTGGTCATCGCCACG GGTGGCCTGTCGATTCCCACCATGGGCGCGACCGGCTTCGGCTATGACGTGGCGCGCCAGTTCGGTCTATCGGTGTCCGA GACCCGGGCCGCGCTGGTGCCGTTCACGCTCACCTCGCAATGGCGCGAGCGTGCCGCGTCGCTGGCGGGAGTGAGTTGTC CGGTGACGGTCGAGGTCGGCGAAGGGCGCTATCACGAACCGATGCTGTTCACGCATCGCGGCGTCTCCGGGCCGGCCATG CTGCAAGCCTCCAGTCATTGGCAACCGGGCATGGCGTTGTCCATCGATCTGCTGCCGGAGGTCGATGTCGCCGGGGAACT GACCGCCATGCGACACCACGCGCCCAAGCGGCGGGTGGCGACGTGGCTGGGGGAACGGCTGCCCAAGCGCCTGGCACAGG CCTGGTGCGAATGGCACGGCCTGGCGGATGTGCCGCTGGGGACGTTGTCCAACCGTGAGGTGGCGCGCCTGGAGGACGAG TTGAAGCGCTGGCAGCTCAAGCCCGCCGGCACCGAGGGCTGGCGCACCGCCGAGGTGACGCTGGGCGGCGTCGACACGCG AGCGATTTCCTCCAAGACCTTCGAGGTGGAGGGGCTGCCGGCTTTGCGTTTCATCGGCGAGGTGCTGGATGTCACCGGCC AGTTGGGCGGCTTCAATTTTCAGTGGGCCTGGGCGTCGGGCGTGGCCTGTGGGCAGGCGGTCTAG
Upstream 100 bases:
>100_bases GCCTGCGTTCAACGCGGTGCACCGGTGTCGGTGCGCCACGCTCGTCGAGGTGTCGCATAACGCTTAGAATGCCACCCTTT GCCTGGAACGAGACGCAACG
Downstream 100 bases:
>100_bases CACGGGCGGACGATAAGGGCGAGCGAGGAGGAGGGGAGGATGTCGCGACACCTCGGGGACAGAGTCGTCCAGGCGCTGCG TCGATGGCGTTGGCCTGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MAQTYDVVVIGAGAAGLMCASTAGYAGRRVLVLDHANKAGKKILMSGGGRCNFTNLATGPANFFSANPHFCISALKRYTP GHFVELVERHAIEYVEKAPGQLFCADSAKQVVAMLLTECEWAGAEVRLKTRVDSLERHGEGMRLATSSGPIDAGTVVIAT GGLSIPTMGATGFGYDVARQFGLSVSETRAALVPFTLTSQWRERAASLAGVSCPVTVEVGEGRYHEPMLFTHRGVSGPAM LQASSHWQPGMALSIDLLPEVDVAGELTAMRHHAPKRRVATWLGERLPKRLAQAWCEWHGLADVPLGTLSNREVARLEDE LKRWQLKPAGTEGWRTAEVTLGGVDTRAISSKTFEVEGLPALRFIGEVLDVTGQLGGFNFQWAWASGVACGQAV
Sequences:
>Translated_394_residues MAQTYDVVVIGAGAAGLMCASTAGYAGRRVLVLDHANKAGKKILMSGGGRCNFTNLATGPANFFSANPHFCISALKRYTP GHFVELVERHAIEYVEKAPGQLFCADSAKQVVAMLLTECEWAGAEVRLKTRVDSLERHGEGMRLATSSGPIDAGTVVIAT GGLSIPTMGATGFGYDVARQFGLSVSETRAALVPFTLTSQWRERAASLAGVSCPVTVEVGEGRYHEPMLFTHRGVSGPAM LQASSHWQPGMALSIDLLPEVDVAGELTAMRHHAPKRRVATWLGERLPKRLAQAWCEWHGLADVPLGTLSNREVARLEDE LKRWQLKPAGTEGWRTAEVTLGGVDTRAISSKTFEVEGLPALRFIGEVLDVTGQLGGFNFQWAWASGVACGQAV >Mature_393_residues AQTYDVVVIGAGAAGLMCASTAGYAGRRVLVLDHANKAGKKILMSGGGRCNFTNLATGPANFFSANPHFCISALKRYTPG HFVELVERHAIEYVEKAPGQLFCADSAKQVVAMLLTECEWAGAEVRLKTRVDSLERHGEGMRLATSSGPIDAGTVVIATG GLSIPTMGATGFGYDVARQFGLSVSETRAALVPFTLTSQWRERAASLAGVSCPVTVEVGEGRYHEPMLFTHRGVSGPAML QASSHWQPGMALSIDLLPEVDVAGELTAMRHHAPKRRVATWLGERLPKRLAQAWCEWHGLADVPLGTLSNREVARLEDEL KRWQLKPAGTEGWRTAEVTLGGVDTRAISSKTFEVEGLPALRFIGEVLDVTGQLGGFNFQWAWASGVACGQAV
Specific function: Unknown
COG id: COG2081
COG function: function code R; Predicted flavoproteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0933 [H]
Homologues:
Organism=Escherichia coli, GI2367234, Length=391, Percent_Identity=50.8951406649616, Blast_Score=380, Evalue=1e-106,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004792 - InterPro: IPR013027 - InterPro: IPR023166 [H]
Pfam domain/function: PF03486 HI0933_like [H]
EC number: NA
Molecular weight: Translated: 42230; Mature: 42099
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQTYDVVVIGAGAAGLMCASTAGYAGRRVLVLDHANKAGKKILMSGGGRCNFTNLATGP CCCEEEEEEECCCCHHHHEECCCCCCCCEEEEEECCCCCCCEEEECCCCEEEECCCCCCC ANFFSANPHFCISALKRYTPGHFVELVERHAIEYVEKAPGQLFCADSAKQVVAMLLTECE HHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHCC WAGAEVRLKTRVDSLERHGEGMRLATSSGPIDAGTVVIATGGLSIPTMGATGFGYDVARQ CCCCEEEEEHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHH FGLSVSETRAALVPFTLTSQWRERAASLAGVSCPVTVEVGEGRYHEPMLFTHRGVSGPAM HCCCHHHCCEEEEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEECCCCCCCE LQASSHWQPGMALSIDLLPEVDVAGELTAMRHHAPKRRVATWLGERLPKRLAQAWCEWHG EEECCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC LADVPLGTLSNREVARLEDELKRWQLKPAGTEGWRTAEVTLGGVDTRAISSKTFEVEGLP CCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCCEEEEEEECCCCCHHHCCCEEEECCCH ALRFIGEVLDVTGQLGGFNFQWAWASGVACGQAV HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure AQTYDVVVIGAGAAGLMCASTAGYAGRRVLVLDHANKAGKKILMSGGGRCNFTNLATGP CCEEEEEEECCCCHHHHEECCCCCCCCEEEEEECCCCCCCEEEECCCCEEEECCCCCCC ANFFSANPHFCISALKRYTPGHFVELVERHAIEYVEKAPGQLFCADSAKQVVAMLLTECE HHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHCC WAGAEVRLKTRVDSLERHGEGMRLATSSGPIDAGTVVIATGGLSIPTMGATGFGYDVARQ CCCCEEEEEHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHH FGLSVSETRAALVPFTLTSQWRERAASLAGVSCPVTVEVGEGRYHEPMLFTHRGVSGPAM HCCCHHHCCEEEEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEECCCCCCCE LQASSHWQPGMALSIDLLPEVDVAGELTAMRHHAPKRRVATWLGERLPKRLAQAWCEWHG EEECCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC LADVPLGTLSNREVARLEDELKRWQLKPAGTEGWRTAEVTLGGVDTRAISSKTFEVEGLP CCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCCEEEEEEECCCCCHHHCCCEEEECCCH ALRFIGEVLDVTGQLGGFNFQWAWASGVACGQAV HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]