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The map label for this gene is 92113526

Identifier: 92113526

GI number: 92113526

Start: 1588487

End: 1589557

Strand: Direct

Name: 92113526

Synonym: Csal_1400

Alternate gene names: NA

Gene position: 1588487-1589557 (Clockwise)

Preceding gene: 92113525

Following gene: 92113527

Centisome position: 42.97

GC content: 63.31

Gene sequence:

>1071_bases
ATGACCACGGCCGACAAACCCCGCATGCGTGTGCCGGCGACCCTGTCCGAGTCCGAACCGGCGGCGGAGGCGTCGCCAGC
CCCGGCGCGGGCCGAGGCGTTCACCTTCGGCGAGCCGGTACCGGTGACGGACCTGGCCGATTTCCTCTACACCGGCTGTT
GGATGCTGACGGCGCGCTGGTACGAACCGCCGGTGGATCTGCCAGCGCTGGCCAAGGTGTATCGCGCGACGGCACATCAC
GGTTCCAGTTTGCAGGTGAAGCGCAACATTCTATCGCGATCGTTCATTCCGCATCGCCTACTGAGCCGGCAGGCGTTCCG
TGCCCTGGTCACGGATTACCTGGTGTTTGGCAATGCGTACATCGAGCGGGTGTATGGGCGCCTTGGGCGGCTGCTGGCAT
TGCGGCCGGCGCGAGCCAAGTACGTGCGCCGAGGCGTCGAAGAAGGGCAGTACTGGTGGGTGACATCCTGGCAGGTGGCC
AGCGAATTCGAGCGCGATTCGGTGATCCACCTGATGGAGCCTGACATCAACCAAGAGATCTACGGCGTGCCGGACTACCT
CGGCGCGCTGCAGTCGATCCTACTCAACGAAAACGCTACCTTGTTCCGCCGCAAGTACTACCTGAACGGTAGTCATGCCG
GCTTTGTGATGTACGTCTCCGATACCGCGCAGAACCAGGAAGACATCGATGCCATGCGCGAGGCCCTGCGCAACTCCAAG
GGCGTGGGCAACTTCCGCAACCTGTTCCTTCACTCGCCGGGCGGCAAGAAGGATGGCGTACAGATCATCCCCATCAGCGA
GGTCGCCGCCAAGGACGAATTCGCCGGCATCAAGCAGGAAACCCGCGACGACACCCTCGCCAGCCACCGCGTACCGCCCC
AGCTGATGGGCGTGATGCCCAACAATGTCGGAGGATTCGGCGACGTGGAGAAGGCGGCCAGGGTCTTCGTCACCAACGAG
CTCGAGCCGCTGCAAGCCGTCTTCGAAGAGGTCAACGACCTGGTGGGGGAGCAGGTGATCCGGTTTCGGCCTTACACACT
TGAGGCGGCCAGCGAATCGCCAACCGGATAA

Upstream 100 bases:

>100_bases
ACGCCGACTTGGCGTGGGCGACGATGCACGCTCTCAACAACGAACCCATCGACGTGCTCGCCGAGGGCGAGCGCGGCGGC
GCCATCATGGAGATGTCCGA

Downstream 100 bases:

>100_bases
CACGAAAAAGCCCAGGGCTTGTGGGCCCCGGGCATGCATCGCCGTGATCGTCCCTGATCGTAAACGCCTTCCTGGCGCAT
CCAGCGACACCGAAAGCATA

Product: Phage portal protein, PBSX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MTTADKPRMRVPATLSESEPAAEASPAPARAEAFTFGEPVPVTDLADFLYTGCWMLTARWYEPPVDLPALAKVYRATAHH
GSSLQVKRNILSRSFIPHRLLSRQAFRALVTDYLVFGNAYIERVYGRLGRLLALRPARAKYVRRGVEEGQYWWVTSWQVA
SEFERDSVIHLMEPDINQEIYGVPDYLGALQSILLNENATLFRRKYYLNGSHAGFVMYVSDTAQNQEDIDAMREALRNSK
GVGNFRNLFLHSPGGKKDGVQIIPISEVAAKDEFAGIKQETRDDTLASHRVPPQLMGVMPNNVGGFGDVEKAARVFVTNE
LEPLQAVFEEVNDLVGEQVIRFRPYTLEAASESPTG

Sequences:

>Translated_356_residues
MTTADKPRMRVPATLSESEPAAEASPAPARAEAFTFGEPVPVTDLADFLYTGCWMLTARWYEPPVDLPALAKVYRATAHH
GSSLQVKRNILSRSFIPHRLLSRQAFRALVTDYLVFGNAYIERVYGRLGRLLALRPARAKYVRRGVEEGQYWWVTSWQVA
SEFERDSVIHLMEPDINQEIYGVPDYLGALQSILLNENATLFRRKYYLNGSHAGFVMYVSDTAQNQEDIDAMREALRNSK
GVGNFRNLFLHSPGGKKDGVQIIPISEVAAKDEFAGIKQETRDDTLASHRVPPQLMGVMPNNVGGFGDVEKAARVFVTNE
LEPLQAVFEEVNDLVGEQVIRFRPYTLEAASESPTG
>Mature_355_residues
TTADKPRMRVPATLSESEPAAEASPAPARAEAFTFGEPVPVTDLADFLYTGCWMLTARWYEPPVDLPALAKVYRATAHHG
SSLQVKRNILSRSFIPHRLLSRQAFRALVTDYLVFGNAYIERVYGRLGRLLALRPARAKYVRRGVEEGQYWWVTSWQVAS
EFERDSVIHLMEPDINQEIYGVPDYLGALQSILLNENATLFRRKYYLNGSHAGFVMYVSDTAQNQEDIDAMREALRNSKG
VGNFRNLFLHSPGGKKDGVQIIPISEVAAKDEFAGIKQETRDDTLASHRVPPQLMGVMPNNVGGFGDVEKAARVFVTNEL
EPLQAVFEEVNDLVGEQVIRFRPYTLEAASESPTG

Specific function: Unknown

COG id: COG5518

COG function: function code R; Bacteriophage capsid portal protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage portal family. PBSX subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006944
- InterPro:   IPR006430 [H]

Pfam domain/function: PF04860 Phage_portal [H]

EC number: NA

Molecular weight: Translated: 39853; Mature: 39721

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTADKPRMRVPATLSESEPAAEASPAPARAEAFTFGEPVPVTDLADFLYTGCWMLTARW
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHC
YEPPVDLPALAKVYRATAHHGSSLQVKRNILSRSFIPHRLLSRQAFRALVTDYLVFGNAY
CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
IERVYGRLGRLLALRPARAKYVRRGVEEGQYWWVTSWQVASEFERDSVIHLMEPDINQEI
HHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECHHHHHHCCCCCEEEEECCCCCCCC
YGVPDYLGALQSILLNENATLFRRKYYLNGSHAGFVMYVSDTAQNQEDIDAMREALRNSK
CCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHCCC
GVGNFRNLFLHSPGGKKDGVQIIPISEVAAKDEFAGIKQETRDDTLASHRVPPQLMGVMP
CCCCHHHEEEECCCCCCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHCCCC
NNVGGFGDVEKAARVFVTNELEPLQAVFEEVNDLVGEQVIRFRPYTLEAASESPTG
CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCC
>Mature Secondary Structure 
TTADKPRMRVPATLSESEPAAEASPAPARAEAFTFGEPVPVTDLADFLYTGCWMLTARW
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHC
YEPPVDLPALAKVYRATAHHGSSLQVKRNILSRSFIPHRLLSRQAFRALVTDYLVFGNAY
CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
IERVYGRLGRLLALRPARAKYVRRGVEEGQYWWVTSWQVASEFERDSVIHLMEPDINQEI
HHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECHHHHHHCCCCCEEEEECCCCCCCC
YGVPDYLGALQSILLNENATLFRRKYYLNGSHAGFVMYVSDTAQNQEDIDAMREALRNSK
CCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHCCC
GVGNFRNLFLHSPGGKKDGVQIIPISEVAAKDEFAGIKQETRDDTLASHRVPPQLMGVMP
CCCCHHHEEEECCCCCCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHCCCC
NNVGGFGDVEKAARVFVTNELEPLQAVFEEVNDLVGEQVIRFRPYTLEAASESPTG
CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1701261 [H]