Definition Chromohalobacter salexigens DSM 3043 chromosome, complete genome.
Accession NC_007963
Length 3,696,649

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The map label for this gene is umuD [C]

Identifier: 92113497

GI number: 92113497

Start: 1566226

End: 1566579

Strand: Direct

Name: umuD [C]

Synonym: Csal_1371

Alternate gene names: 92113497

Gene position: 1566226-1566579 (Clockwise)

Preceding gene: 92113493

Following gene: 92113500

Centisome position: 42.37

GC content: 64.41

Gene sequence:

>354_bases
ATGCGAGTGAACTACCTCGGCCCGGCGATGCTGGGTATCAAACACCCCGCGCTGGAAGGCTACGACCTCTCCGGCTTTCC
CCCGAGCTGCTATGTGGTCGAGGTGAGCGAAGAAGCCGGCGTGAACGGCCCGCTGATGGAAGGTGACCTGCTGGTTGTCG
ATGAGCAGAAGCCCGCCGGGCACGCGGATCTGGTGGTAGTGGACCTGGAAGGTGAGCAGCGGCTCTTCAAGAGCCATCGC
ATCGGCGGACGCTTGCGCCTGATGCCGACCGTCGGCCCCAAGGAATCGCTATGGGCTAGACGGTCGGATCTACGGGGTGT
GGTGGTGAGCCAGGCGCGGCGGTATGGGTGGTGA

Upstream 100 bases:

>100_bases
GCACCCTTAGGCAAACGCTAATATGACAAACTCTAGGGAGCGCAGGTGGCCGGGCCCGGCATGGCGCGGCGGGTAGCAGG
ATCCGAATGGCAGGGACGAC

Downstream 100 bases:

>100_bases
GAAAAGAATGCCCCGGCTACGTTTGGCCGGGGCTCCCACTCAGGCTGCTTGCCTACAGTGTGGACAGGCGACTTCGCCAT
CGCCATCACACTCTTCGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MRVNYLGPAMLGIKHPALEGYDLSGFPPSCYVVEVSEEAGVNGPLMEGDLLVVDEQKPAGHADLVVVDLEGEQRLFKSHR
IGGRLRLMPTVGPKESLWARRSDLRGVVVSQARRYGW

Sequences:

>Translated_117_residues
MRVNYLGPAMLGIKHPALEGYDLSGFPPSCYVVEVSEEAGVNGPLMEGDLLVVDEQKPAGHADLVVVDLEGEQRLFKSHR
IGGRLRLMPTVGPKESLWARRSDLRGVVVSQARRYGW
>Mature_117_residues
MRVNYLGPAMLGIKHPALEGYDLSGFPPSCYVVEVSEEAGVNGPLMEGDLLVVDEQKPAGHADLVVVDLEGEQRLFKSHR
IGGRLRLMPTVGPKESLWARRSDLRGVVVSQARRYGW

Specific function: Involved In Uv Protection And Mutation. Essential For Induced (Or Sos) Mutagenesis. May Modify The DNA Replication Machinery To Allow Bypass Synthesis Across A Damaged Template. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.21.- [C]

Molecular weight: Translated: 12899; Mature: 12899

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVNYLGPAMLGIKHPALEGYDLSGFPPSCYVVEVSEEAGVNGPLMEGDLLVVDEQKPAG
CEECCCCCCEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEECCCEEEEECCCCCC
HADLVVVDLEGEQRLFKSHRIGGRLRLMPTVGPKESLWARRSDLRGVVVSQARRYGW
CCCEEEEECCCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MRVNYLGPAMLGIKHPALEGYDLSGFPPSCYVVEVSEEAGVNGPLMEGDLLVVDEQKPAG
CEECCCCCCEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEECCCEEEEECCCCCC
HADLVVVDLEGEQRLFKSHRIGGRLRLMPTVGPKESLWARRSDLRGVVVSQARRYGW
CCCEEEEECCCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA