| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is umuD [C]
Identifier: 92113497
GI number: 92113497
Start: 1566226
End: 1566579
Strand: Direct
Name: umuD [C]
Synonym: Csal_1371
Alternate gene names: 92113497
Gene position: 1566226-1566579 (Clockwise)
Preceding gene: 92113493
Following gene: 92113500
Centisome position: 42.37
GC content: 64.41
Gene sequence:
>354_bases ATGCGAGTGAACTACCTCGGCCCGGCGATGCTGGGTATCAAACACCCCGCGCTGGAAGGCTACGACCTCTCCGGCTTTCC CCCGAGCTGCTATGTGGTCGAGGTGAGCGAAGAAGCCGGCGTGAACGGCCCGCTGATGGAAGGTGACCTGCTGGTTGTCG ATGAGCAGAAGCCCGCCGGGCACGCGGATCTGGTGGTAGTGGACCTGGAAGGTGAGCAGCGGCTCTTCAAGAGCCATCGC ATCGGCGGACGCTTGCGCCTGATGCCGACCGTCGGCCCCAAGGAATCGCTATGGGCTAGACGGTCGGATCTACGGGGTGT GGTGGTGAGCCAGGCGCGGCGGTATGGGTGGTGA
Upstream 100 bases:
>100_bases GCACCCTTAGGCAAACGCTAATATGACAAACTCTAGGGAGCGCAGGTGGCCGGGCCCGGCATGGCGCGGCGGGTAGCAGG ATCCGAATGGCAGGGACGAC
Downstream 100 bases:
>100_bases GAAAAGAATGCCCCGGCTACGTTTGGCCGGGGCTCCCACTCAGGCTGCTTGCCTACAGTGTGGACAGGCGACTTCGCCAT CGCCATCACACTCTTCGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MRVNYLGPAMLGIKHPALEGYDLSGFPPSCYVVEVSEEAGVNGPLMEGDLLVVDEQKPAGHADLVVVDLEGEQRLFKSHR IGGRLRLMPTVGPKESLWARRSDLRGVVVSQARRYGW
Sequences:
>Translated_117_residues MRVNYLGPAMLGIKHPALEGYDLSGFPPSCYVVEVSEEAGVNGPLMEGDLLVVDEQKPAGHADLVVVDLEGEQRLFKSHR IGGRLRLMPTVGPKESLWARRSDLRGVVVSQARRYGW >Mature_117_residues MRVNYLGPAMLGIKHPALEGYDLSGFPPSCYVVEVSEEAGVNGPLMEGDLLVVDEQKPAGHADLVVVDLEGEQRLFKSHR IGGRLRLMPTVGPKESLWARRSDLRGVVVSQARRYGW
Specific function: Involved In Uv Protection And Mutation. Essential For Induced (Or Sos) Mutagenesis. May Modify The DNA Replication Machinery To Allow Bypass Synthesis Across A Damaged Template. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.4.21.- [C]
Molecular weight: Translated: 12899; Mature: 12899
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVNYLGPAMLGIKHPALEGYDLSGFPPSCYVVEVSEEAGVNGPLMEGDLLVVDEQKPAG CEECCCCCCEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEECCCEEEEECCCCCC HADLVVVDLEGEQRLFKSHRIGGRLRLMPTVGPKESLWARRSDLRGVVVSQARRYGW CCCEEEEECCCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHCCC >Mature Secondary Structure MRVNYLGPAMLGIKHPALEGYDLSGFPPSCYVVEVSEEAGVNGPLMEGDLLVVDEQKPAG CEECCCCCCEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEECCCEEEEECCCCCC HADLVVVDLEGEQRLFKSHRIGGRLRLMPTVGPKESLWARRSDLRGVVVSQARRYGW CCCEEEEECCCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA