| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is 92113493
Identifier: 92113493
GI number: 92113493
Start: 1562259
End: 1563464
Strand: Direct
Name: 92113493
Synonym: Csal_1367
Alternate gene names: NA
Gene position: 1562259-1563464 (Clockwise)
Preceding gene: 92113492
Following gene: 92113497
Centisome position: 42.26
GC content: 41.46
Gene sequence:
>1206_bases ATGATGAGTGATTTTAATTTAAAGATCCCAGTTCTAAAAGTCGAGCAGCCCATCGGCACCTTCTTTGTCGCTGGTATCAG AGCTAGAGACTTGGTCGAGATTTCCTATTCAGACGTCCGTCGCTTGGCAGAAGATCAGCGTGACTTAGAGAAATATCTAG GTATCCAGCGACCAGTTAGTAAAAGAAGAATAAATGAGATAAAGAAGTATATTGAGGGTGATGACTCTACTTTCCCTACA GCAGTGGTTCTTGCTGTTGATGAAAAATGTGTCGTGCTGGAGAAGGTTACGGATGAGTTCTACTACTTGTCACTTTCTGC ATATTATCCTGAGGAAGGGATAGACGAAGACCCAATTCCTAAAGGAAAGATTGCAAAAGTGATTGATGGTCAGCATCGGA TTGCTGCTTTCATGGATGAAAATGATAACTGGACATTTGATGACTGGGCGAGAATTTTTGATATAAATGTATCTATCTTT GTCGGTGCGGATGTCGCTGAGCAAGCAAATATATTTGCCACTGTAAACCTTGCTCAAACCAAGGTTAATCGAAGTTTGGT GTATGATTTAACTGAGCTGGCAAAAACGGATAGTCCATTCAAGACCTGCCATAATGTGGCAGTTGTTTTAGATGGTGAGC CTACTAGTCCTTTTTTTGAGAGAATAAAAAGGCTTGGTACTGCTACGCCGGGAAGGAAGCGCGAACCATTAACTCAAGCT GCATTTGTAGAATCGTTAGTGCGATTTATATCCGCCGACCCTGTAGTGGATAGAAATATGCTTATTGAGGGTAAGCGGCC ACGGAGAGCGGATCATGCTGAGTTGTTAAATCGTCCTTTTAGGAATCTTTTTTTAGATGGTAAAGATTTGGATATTGCAG AGATAGTTTATAATTATTTTGAGGCGGTAAAAAGTAAGTGGCCTAACTCGTGGGAGAGGCTGGATGTGACTGGGAACCTG CTTCCTAAGTCTAATTCTTTTAAAGCTTTGATGAAGTATTTGAAAGAAGATGTATATTTGACTGCTGTGGGTGATGATAT AGGTAGAATTCCCAGTAAAGAAGAATTTTTGCCCTTTTTTGATGGTATCGAGCTTAAGGATGAAGACTTTACCGCTCGTA ATTTTGTCCCGGGTAGTGGTGGACAGGCAATGTTTCTTAAGCTGCTGAGGGGGCAAGTGAAGCTAGAGGATATCGTAGAA GAGTGA
Upstream 100 bases:
>100_bases ATGGTTTTGGTGGTGGCAGGGGTTTTTTTCGTCGCAAGGAAACTAGTGAAAAGCAATTTCAAAGTGATTTTTCTGACAGG TTAAGGAAGACCGAGGGTTG
Downstream 100 bases:
>100_bases TAGGGCTGCTGGGTTTTAGGCCCAGCAGCTTATTGTAAGCTCTTCATATTTTCCTCTGTGCTCGCTTTTTCCAGACAGCA CGCTACTTCTAGTTAGTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: Dgqhr Domain; Dgqhr Domain Containing Protein; DGQHR Domain-Containing Protein
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MMSDFNLKIPVLKVEQPIGTFFVAGIRARDLVEISYSDVRRLAEDQRDLEKYLGIQRPVSKRRINEIKKYIEGDDSTFPT AVVLAVDEKCVVLEKVTDEFYYLSLSAYYPEEGIDEDPIPKGKIAKVIDGQHRIAAFMDENDNWTFDDWARIFDINVSIF VGADVAEQANIFATVNLAQTKVNRSLVYDLTELAKTDSPFKTCHNVAVVLDGEPTSPFFERIKRLGTATPGRKREPLTQA AFVESLVRFISADPVVDRNMLIEGKRPRRADHAELLNRPFRNLFLDGKDLDIAEIVYNYFEAVKSKWPNSWERLDVTGNL LPKSNSFKALMKYLKEDVYLTAVGDDIGRIPSKEEFLPFFDGIELKDEDFTARNFVPGSGGQAMFLKLLRGQVKLEDIVE E
Sequences:
>Translated_401_residues MMSDFNLKIPVLKVEQPIGTFFVAGIRARDLVEISYSDVRRLAEDQRDLEKYLGIQRPVSKRRINEIKKYIEGDDSTFPT AVVLAVDEKCVVLEKVTDEFYYLSLSAYYPEEGIDEDPIPKGKIAKVIDGQHRIAAFMDENDNWTFDDWARIFDINVSIF VGADVAEQANIFATVNLAQTKVNRSLVYDLTELAKTDSPFKTCHNVAVVLDGEPTSPFFERIKRLGTATPGRKREPLTQA AFVESLVRFISADPVVDRNMLIEGKRPRRADHAELLNRPFRNLFLDGKDLDIAEIVYNYFEAVKSKWPNSWERLDVTGNL LPKSNSFKALMKYLKEDVYLTAVGDDIGRIPSKEEFLPFFDGIELKDEDFTARNFVPGSGGQAMFLKLLRGQVKLEDIVE E >Mature_401_residues MMSDFNLKIPVLKVEQPIGTFFVAGIRARDLVEISYSDVRRLAEDQRDLEKYLGIQRPVSKRRINEIKKYIEGDDSTFPT AVVLAVDEKCVVLEKVTDEFYYLSLSAYYPEEGIDEDPIPKGKIAKVIDGQHRIAAFMDENDNWTFDDWARIFDINVSIF VGADVAEQANIFATVNLAQTKVNRSLVYDLTELAKTDSPFKTCHNVAVVLDGEPTSPFFERIKRLGTATPGRKREPLTQA AFVESLVRFISADPVVDRNMLIEGKRPRRADHAELLNRPFRNLFLDGKDLDIAEIVYNYFEAVKSKWPNSWERLDVTGNL LPKSNSFKALMKYLKEDVYLTAVGDDIGRIPSKEEFLPFFDGIELKDEDFTARNFVPGSGGQAMFLKLLRGQVKLEDIVE E
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45670; Mature: 45670
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSDFNLKIPVLKVEQPIGTFFVAGIRARDLVEISYSDVRRLAEDQRDLEKYLGIQRPVS CCCCCCEEEEEEEECCCCCHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCHH KRRINEIKKYIEGDDSTFPTAVVLAVDEKCVVLEKVTDEFYYLSLSAYYPEEGIDEDPIP HHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEHHHHCCCEEEEEEEEECCCCCCCCCCCC KGKIAKVIDGQHRIAAFMDENDNWTFDDWARIFDINVSIFVGADVAEQANIFATVNLAQT CCCHHHHHCCCCEEEEEEECCCCCCHHHHHEEEEEEEEEEECCCHHHCCCEEEEEEHHHH KVNRSLVYDLTELAKTDSPFKTCHNVAVVLDGEPTSPFFERIKRLGTATPGRKREPLTQA HHHHHHHHHHHHHHHCCCHHHHHCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCHHHH AFVESLVRFISADPVVDRNMLIEGKRPRRADHAELLNRPFRNLFLDGKDLDIAEIVYNYF HHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHCCHHHHCCCCCCCCHHHHHHHHH EAVKSKWPNSWERLDVTGNLLPKSNSFKALMKYLKEDVYLTAVGDDIGRIPSKEEFLPFF HHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCEEEEEECCHHHCCCCCCCCCCHH DGIELKDEDFTARNFVPGSGGQAMFLKLLRGQVKLEDIVEE CCCEECCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHCC >Mature Secondary Structure MMSDFNLKIPVLKVEQPIGTFFVAGIRARDLVEISYSDVRRLAEDQRDLEKYLGIQRPVS CCCCCCEEEEEEEECCCCCHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCHH KRRINEIKKYIEGDDSTFPTAVVLAVDEKCVVLEKVTDEFYYLSLSAYYPEEGIDEDPIP HHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEHHHHCCCEEEEEEEEECCCCCCCCCCCC KGKIAKVIDGQHRIAAFMDENDNWTFDDWARIFDINVSIFVGADVAEQANIFATVNLAQT CCCHHHHHCCCCEEEEEEECCCCCCHHHHHEEEEEEEEEEECCCHHHCCCEEEEEEHHHH KVNRSLVYDLTELAKTDSPFKTCHNVAVVLDGEPTSPFFERIKRLGTATPGRKREPLTQA HHHHHHHHHHHHHHHCCCHHHHHCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCHHHH AFVESLVRFISADPVVDRNMLIEGKRPRRADHAELLNRPFRNLFLDGKDLDIAEIVYNYF HHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHCCHHHHCCCCCCCCHHHHHHHHH EAVKSKWPNSWERLDVTGNLLPKSNSFKALMKYLKEDVYLTAVGDDIGRIPSKEEFLPFF HHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCEEEEEECCHHHCCCCCCCCCCHH DGIELKDEDFTARNFVPGSGGQAMFLKLLRGQVKLEDIVEE CCCEECCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA