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The map label for this gene is ydjA [H]

Identifier: 92113480

GI number: 92113480

Start: 1552174

End: 1552734

Strand: Direct

Name: ydjA [H]

Synonym: Csal_1354

Alternate gene names: 92113480

Gene position: 1552174-1552734 (Clockwise)

Preceding gene: 92113479

Following gene: 92113481

Centisome position: 41.99

GC content: 67.2

Gene sequence:

>561_bases
ATGGATGCCATGACCTTACTGCACGAGCGCAGCTCGATGGGGAAACTGGCCGCGCCCGCCCCCGACCGCGATCAACTGGA
TGCACTGTACCGTGCCGCCTTGCGTGCGCCCGATCACGACGCCCTGACGCCATGGCGGTTCATCGAGTTTTCCGGGGAAG
GGCTCGACCGGCTGGGCGAGCTATACGCCAAGGCCGAGCAGCGTCTCAATCCGCACATCGACGACGGCCATCTCGACGCC
GCGCGCAAGAAGCCCAAGCGTGCGCCGATGATCATCGCGGTGATCGCCAAGGTCACGCCCGATCACCCCAAGGTGCCGCG
TATCGAACAGCTGCTTTCCGCCGGTTGCGCGGCGCATGGCATCCTGCTCGCGGCGCAGGCGCAAGGCCTGGGCGCCATGT
GGCGCACCGGCCACTACGCCTTCGACCCCACGGTGCGTGAAGGCCTCGGCCTCGCCGAAGACGACGAGCTGGTCGGCTTT
CTGTACCTCGGTCAGATGGGCGGGCGCCACAAGCCGCTGCCCGAACGCGATCCGAGTGACTTCGTCGAGCGCTGGTCGTG
A

Upstream 100 bases:

>100_bases
GGCTGGCGCGTCAGTGAGCGTGCAAACTGACGCCATGCATTGAACACCGGCGGCTTCGGCCGCACATCATTACCCTATTC
AGACGGCCAAGGAGATGTTC

Downstream 100 bases:

>100_bases
ACGCTACGCCACGCCGTCCGGGGGTGATGCATCCCCGATTGCCGTTGCCCGAGGCCAGCGACGGAGACGACCTCGGAGGC
TTCCTCGCCTGGTTGCGCGA

Product: nitroreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MDAMTLLHERSSMGKLAAPAPDRDQLDALYRAALRAPDHDALTPWRFIEFSGEGLDRLGELYAKAEQRLNPHIDDGHLDA
ARKKPKRAPMIIAVIAKVTPDHPKVPRIEQLLSAGCAAHGILLAAQAQGLGAMWRTGHYAFDPTVREGLGLAEDDELVGF
LYLGQMGGRHKPLPERDPSDFVERWS

Sequences:

>Translated_186_residues
MDAMTLLHERSSMGKLAAPAPDRDQLDALYRAALRAPDHDALTPWRFIEFSGEGLDRLGELYAKAEQRLNPHIDDGHLDA
ARKKPKRAPMIIAVIAKVTPDHPKVPRIEQLLSAGCAAHGILLAAQAQGLGAMWRTGHYAFDPTVREGLGLAEDDELVGF
LYLGQMGGRHKPLPERDPSDFVERWS
>Mature_186_residues
MDAMTLLHERSSMGKLAAPAPDRDQLDALYRAALRAPDHDALTPWRFIEFSGEGLDRLGELYAKAEQRLNPHIDDGHLDA
ARKKPKRAPMIIAVIAKVTPDHPKVPRIEQLLSAGCAAHGILLAAQAQGLGAMWRTGHYAFDPTVREGLGLAEDDELVGF
LYLGQMGGRHKPLPERDPSDFVERWS

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=164, Percent_Identity=46.9512195121951, Blast_Score=150, Evalue=4e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 20533; Mature: 20533

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAMTLLHERSSMGKLAAPAPDRDQLDALYRAALRAPDHDALTPWRFIEFSGEGLDRLGE
CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHH
LYAKAEQRLNPHIDDGHLDAARKKPKRAPMIIAVIAKVTPDHPKVPRIEQLLSAGCAAHG
HHHHHHHHCCCCCCCCCCCHHHCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCHHHHH
ILLAAQAQGLGAMWRTGHYAFDPTVREGLGLAEDDELVGFLYLGQMGGRHKPLPERDPSD
HHHHHCCCCCCHHHHCCCEEECCHHHHCCCCCCCCCEEEHHEECCCCCCCCCCCCCCHHH
FVERWS
HHHHCC
>Mature Secondary Structure
MDAMTLLHERSSMGKLAAPAPDRDQLDALYRAALRAPDHDALTPWRFIEFSGEGLDRLGE
CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHH
LYAKAEQRLNPHIDDGHLDAARKKPKRAPMIIAVIAKVTPDHPKVPRIEQLLSAGCAAHG
HHHHHHHHCCCCCCCCCCCHHHCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCHHHHH
ILLAAQAQGLGAMWRTGHYAFDPTVREGLGLAEDDELVGFLYLGQMGGRHKPLPERDPSD
HHHHHCCCCCCHHHHCCCEEECCHHHHCCCCCCCCCEEEHHEECCCCCCCCCCCCCCHHH
FVERWS
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]