| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is queF
Identifier: 92113479
GI number: 92113479
Start: 1551257
End: 1552090
Strand: Direct
Name: queF
Synonym: Csal_1353
Alternate gene names: 92113479
Gene position: 1551257-1552090 (Clockwise)
Preceding gene: 92113478
Following gene: 92113480
Centisome position: 41.96
GC content: 67.51
Gene sequence:
>834_bases ATGAGCGAACGTGACAAAACCCTCGAGCATGCGCCGCTGGGTCGCGAGTCCGCGTATCCCGAACACTACGACGCCGGCCT GCTGTTTCCCATTCCCCGGCAGGCCAACCGCGCGCCGCTGGGGCTCGATGATGCCGCGCTGCCGTTCGAGGGCGAGGATG AGTGGCACGCCTTCGAGCTTTCCTGGCTCGACGCGAAGGGCAAGCCGATCGTCGCCGTGGCCCGGTTCCGGCTGCCCGCC GACTCCCCCTCGCTGATCGAGTCGAAGTCCTGGAAGCTGTACCTCAACAGCTTCAACCAGACGCGCTTCGACAGACGCGA GGCGGTGATCGACACGCTCGAGCGTGACCTGGCCCAGGCGGCGGGCGCGTCGGTGGCGGTGGCCCTGTTCGGCGTCGAGG ACGATGCCCTGATGCCCCGAGCGCTGCCCGGCGAGTGCCTGGACGATCTCGACGTGAGCATCGAGTACTACACGCCGACT CCTGGGCTGCTTGAAGTCGGCGAAGAGATCGTCGAAGAAACGCTGCACTCGCACCTGCTCAAGTCCAATTGCCCGGTGAC CGGCCAGCCCGACTGGGGCAGCGTGCTGATTCGGTATCGCGGCCCCCGGCTGGAGCGCGATGCCCTGCTGAAGTATCTGA TCTCCTACCGGCAGCATCAGGACTTTCACGAGCACTGCGTCGAGCATCTGTTCGTGGATCTCATGGCGCGGGCCAGGCCG GAGCGGCTGCTGGTCATGGCGCGCTACGTGAGGCGCGGCGGGCTGGATATCAGCCCCTGGCGGGGTACGCCCGGCGAGCG GCCGCCCACGCCACTCCGGCTGGCGCGTCAGTGA
Upstream 100 bases:
>100_bases CCGGTCGGCGGAGCGCTGGTGGCCATCGCGATCTTCATCGTCGTGTTCTTCGCGGTGGGGCTGTGGATGCTCGACCGCGG CAAGGGGATCCGGAGCTGAC
Downstream 100 bases:
>100_bases GCGTGCAAACTGACGCCATGCATTGAACACCGGCGGCTTCGGCCGCACATCATTACCCTATTCAGACGGCCAAGGAGATG TTCATGGATGCCATGACCTT
Product: 7-cyano-7-deazaguanine reductase
Products: NA
Alternate protein names: 7-cyano-7-carbaguanine reductase; NADPH-dependent nitrile oxidoreductase; PreQ(0) reductase
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MSERDKTLEHAPLGRESAYPEHYDAGLLFPIPRQANRAPLGLDDAALPFEGEDEWHAFELSWLDAKGKPIVAVARFRLPA DSPSLIESKSWKLYLNSFNQTRFDRREAVIDTLERDLAQAAGASVAVALFGVEDDALMPRALPGECLDDLDVSIEYYTPT PGLLEVGEEIVEETLHSHLLKSNCPVTGQPDWGSVLIRYRGPRLERDALLKYLISYRQHQDFHEHCVEHLFVDLMARARP ERLLVMARYVRRGGLDISPWRGTPGERPPTPLRLARQ
Sequences:
>Translated_277_residues MSERDKTLEHAPLGRESAYPEHYDAGLLFPIPRQANRAPLGLDDAALPFEGEDEWHAFELSWLDAKGKPIVAVARFRLPA DSPSLIESKSWKLYLNSFNQTRFDRREAVIDTLERDLAQAAGASVAVALFGVEDDALMPRALPGECLDDLDVSIEYYTPT PGLLEVGEEIVEETLHSHLLKSNCPVTGQPDWGSVLIRYRGPRLERDALLKYLISYRQHQDFHEHCVEHLFVDLMARARP ERLLVMARYVRRGGLDISPWRGTPGERPPTPLRLARQ >Mature_276_residues SERDKTLEHAPLGRESAYPEHYDAGLLFPIPRQANRAPLGLDDAALPFEGEDEWHAFELSWLDAKGKPIVAVARFRLPAD SPSLIESKSWKLYLNSFNQTRFDRREAVIDTLERDLAQAAGASVAVALFGVEDDALMPRALPGECLDDLDVSIEYYTPTP GLLEVGEEIVEETLHSHLLKSNCPVTGQPDWGSVLIRYRGPRLERDALLKYLISYRQHQDFHEHCVEHLFVDLMARARPE RLLVMARYVRRGGLDISPWRGTPGERPPTPLRLARQ
Specific function: Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
COG id: COG0780
COG function: function code R; Enzyme related to GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family. QueF type 2 subfamily
Homologues:
Organism=Escherichia coli, GI1789158, Length=276, Percent_Identity=51.8115942028985, Blast_Score=278, Evalue=2e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): QUEF_CHRSD (Q1QXV0)
Other databases:
- EMBL: CP000285 - RefSeq: YP_573407.1 - ProteinModelPortal: Q1QXV0 - SMR: Q1QXV0 - STRING: Q1QXV0 - GeneID: 4029142 - GenomeReviews: CP000285_GR - KEGG: csa:Csal_1353 - NMPDR: fig|290398.4.peg.1343 - eggNOG: COG0780 - HOGENOM: HBG289139 - OMA: PFRSNFE - ProtClustDB: PRK11792 - BioCyc: CSAL290398:CSAL_1353-MONOMER - GO: GO:0005737 - HAMAP: MF_00817 - InterPro: IPR016428 - InterPro: IPR020602 - PIRSF: PIRSF004750 - TIGRFAMs: TIGR03138
Pfam domain/function: PF01227 GTP_cyclohydroI
EC number: =1.7.1.13
Molecular weight: Translated: 31386; Mature: 31255
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERDKTLEHAPLGRESAYPEHYDAGLLFPIPRQANRAPLGLDDAALPFEGEDEWHAFEL CCCCCCCHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE SWLDAKGKPIVAVARFRLPADSPSLIESKSWKLYLNSFNQTRFDRREAVIDTLERDLAQA EEECCCCCCEEEEEEEECCCCCCHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH AGASVAVALFGVEDDALMPRALPGECLDDLDVSIEYYTPTPGLLEVGEEIVEETLHSHLL CCCEEEEEEEECCCCCCCCCCCCCHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH KSNCPVTGQPDWGSVLIRYRGPRLERDALLKYLISYRQHQDFHEHCVEHLFVDLMARARP HCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCH ERLLVMARYVRRGGLDISPWRGTPGERPPTPLRLARQ HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SERDKTLEHAPLGRESAYPEHYDAGLLFPIPRQANRAPLGLDDAALPFEGEDEWHAFEL CCCCCCHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE SWLDAKGKPIVAVARFRLPADSPSLIESKSWKLYLNSFNQTRFDRREAVIDTLERDLAQA EEECCCCCCEEEEEEEECCCCCCHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH AGASVAVALFGVEDDALMPRALPGECLDDLDVSIEYYTPTPGLLEVGEEIVEETLHSHLL CCCEEEEEEEECCCCCCCCCCCCCHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH KSNCPVTGQPDWGSVLIRYRGPRLERDALLKYLISYRQHQDFHEHCVEHLFVDLMARARP HCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCH ERLLVMARYVRRGGLDISPWRGTPGERPPTPLRLARQ HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA