| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is 92113384
Identifier: 92113384
GI number: 92113384
Start: 1435898
End: 1437799
Strand: Direct
Name: 92113384
Synonym: Csal_1258
Alternate gene names: NA
Gene position: 1435898-1437799 (Clockwise)
Preceding gene: 92113383
Following gene: 92113385
Centisome position: 38.84
GC content: 69.51
Gene sequence:
>1902_bases ATGCTGCGCAAGCTTGTCCTGGCATCTTGTCTCGTCTTGGCCGGTATCGGTACTGCGGTCCCTTCTGCCTGGGGCGTCGG TGTGGAAGCTCCCCGCGTCACGTCCTTGCTTCACCAGCCGTTGCGCGCCGTACTGCCGTTGTCGGGAGCGGAAGGCATCG CGCCTCGTCGCTTCGAGGTACACCTCGCCGACGCGGCGGCCTTCGAGGCGGCGGGCGTCGACACTTCAGCCCTGGCTCTG CCATTGCGCGTGACGGTGCCCGAAGGGGGAGCGTCGCCGCGCATTCTGATCACCAGCGAAACGCCGGTGACGCAGTCGTA CCTCGAGTTGCTGTTGTCGATTTCCTGGCCCGGGGGTCGGCTGCAAGCCCCCGTGACCCTGCTGCTCGATCCGCCCGGTT ATGCGCTGACGAGCCATGCGGGGGGCGAGCGAGCATCATCTTCTCAGCGCCAGACCTCGCGTCCGAAGGCCGACGCCCAA GCCGTGAGTGCCTCGTCGCCAGCGCCGGCACCGACAGCAGCGGCCGCGCCAGCCGCGAAGCCGGCGAGCGAGGCGTCGCG TGCCGCCGAGCTGGAAGCGGCGTTGCAGGCTCTGCGGGTTCGTCTGGCACGCGTCGAGCACGAACGCGATGCGCTGGCCG AACGCCTCGCGGCCCGCGAGTCACCGAGGCCCGCGACCGTGGCCGATTTGTCTGGCGTGGCGGCATTGTTGGCACAAGCA CCTGCTGCGACATCCTCTTCCGAGCCTGCTGCCGCCACGTCCACGGCGGCATCCGAGGCCGCTTCTTCGGGCGGCGCGGC GGTCGAGCAGGCGCCTCCCGAGGCGACGCCGGGGGAAGACGCCGGGTTTTCCTGGTTGCTGCCGCTGCAACTCGCCTTGC TGGCGGCCCTGGTAACCTTGCTGGGTATCTGGGGATGGCAGCGGTGGCGGCGTGGACGCGAGGCCACCTATCAGGAAGTC GCGAATCAGCTGGGCGCAACGGAGACGGGGGCCAAGGCGCGACCGGGGCTCGGGAAGGACGATGGCCCGGAAACCGCGAC CATCGATGAAGCCGATATCTACATGGCCTATGGGCGTTACGATCAGGCAAGAGAGTGGTTGCAGGCGCGCCTGGCGGAAC AGGAGAGCACCGAGCTGCGGCTCAAGCTGTTGACGGCGCTGGGAGAGCTGGGCGAGATGACGGCGATGGCTCGGGAAGCC GAGCGTTTCGCACCGTCGGCCGATGCCGAGACGCGGCGCGAGGCCGACGCCTTGCTTGCGCATTATCGGCAACTGGCCAG CACTCGGGCCGATGCCGCGCCGCAGGCGTCGGCGGGAGCCTCGGAAGTGGACCGGCTGTTCGAGGACGCTGCCCCGACGC CCCGAGAGCCGGAGGACGGAGCGCCCGCGACGGCGGCAGAAGTACCCGCCGAGCGCGACGTTTCGCCGTCTGCATCGGCA ACGCCCGAGGCTTTCGAGGCACGCCCGCCATCGACGCGTGTCGAGCATGGCGAGGACGAGGCGCCCGCGACGTCCCCGGT GGACGAAGCGGCAACACCGGCTCCGCGTCCCGATGCCGAGGCGCAGCCTCTCGAGTTCGAGCCGCCCGAGATTCCCGAGG CTCCTTCGCGACTGGACTACCAGTTGCCCGACGTGGAGACGGGGGACGAGGACGACGCCCCGGAACGGTTGTCGACCCTG GCGCACGACACGTCCGGCTGGGAAGTCGAGGAAGTGGCATTCGAGCCGCGGGATCTGGATAATGAACGCCCCGCCGAGGC ATTGGCGGAAGCGCGTCATCTGTTGGCCGAGGAGGGCGGAGGCGAGCGTGCCAGGGCGCTGCTGGCCGTCGCCGCGCGCG CCGAGGACGAGCAGGTGTCGCATGAGGCCAAGGCGCTGATGCGTAGCCACGATGCCGTATGA
Upstream 100 bases:
>100_bases GCTCGTCTCGTTACACGGAGGCTGGCATGAGGCGCCATGCTGCGAGGTATGATAAAACTCAGTCCATGATTGTCATCGTT CGCCGCTTTTGAGAGGGCTC
Downstream 100 bases:
>100_bases GCGCATCGCTTTGCTGCCGGGCGTCGGGCCGTTCCGTGATCGATATTCGAGGGTTTCGCGTGGCTGATTTCGATGGCATT TTTTGAGTTTCAGGATGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 633; Mature: 633
Protein sequence:
>633_residues MLRKLVLASCLVLAGIGTAVPSAWGVGVEAPRVTSLLHQPLRAVLPLSGAEGIAPRRFEVHLADAAAFEAAGVDTSALAL PLRVTVPEGGASPRILITSETPVTQSYLELLLSISWPGGRLQAPVTLLLDPPGYALTSHAGGERASSSQRQTSRPKADAQ AVSASSPAPAPTAAAAPAAKPASEASRAAELEAALQALRVRLARVEHERDALAERLAARESPRPATVADLSGVAALLAQA PAATSSSEPAAATSTAASEAASSGGAAVEQAPPEATPGEDAGFSWLLPLQLALLAALVTLLGIWGWQRWRRGREATYQEV ANQLGATETGAKARPGLGKDDGPETATIDEADIYMAYGRYDQAREWLQARLAEQESTELRLKLLTALGELGEMTAMAREA ERFAPSADAETRREADALLAHYRQLASTRADAAPQASAGASEVDRLFEDAAPTPREPEDGAPATAAEVPAERDVSPSASA TPEAFEARPPSTRVEHGEDEAPATSPVDEAATPAPRPDAEAQPLEFEPPEIPEAPSRLDYQLPDVETGDEDDAPERLSTL AHDTSGWEVEEVAFEPRDLDNERPAEALAEARHLLAEEGGGERARALLAVAARAEDEQVSHEAKALMRSHDAV
Sequences:
>Translated_633_residues MLRKLVLASCLVLAGIGTAVPSAWGVGVEAPRVTSLLHQPLRAVLPLSGAEGIAPRRFEVHLADAAAFEAAGVDTSALAL PLRVTVPEGGASPRILITSETPVTQSYLELLLSISWPGGRLQAPVTLLLDPPGYALTSHAGGERASSSQRQTSRPKADAQ AVSASSPAPAPTAAAAPAAKPASEASRAAELEAALQALRVRLARVEHERDALAERLAARESPRPATVADLSGVAALLAQA PAATSSSEPAAATSTAASEAASSGGAAVEQAPPEATPGEDAGFSWLLPLQLALLAALVTLLGIWGWQRWRRGREATYQEV ANQLGATETGAKARPGLGKDDGPETATIDEADIYMAYGRYDQAREWLQARLAEQESTELRLKLLTALGELGEMTAMAREA ERFAPSADAETRREADALLAHYRQLASTRADAAPQASAGASEVDRLFEDAAPTPREPEDGAPATAAEVPAERDVSPSASA TPEAFEARPPSTRVEHGEDEAPATSPVDEAATPAPRPDAEAQPLEFEPPEIPEAPSRLDYQLPDVETGDEDDAPERLSTL AHDTSGWEVEEVAFEPRDLDNERPAEALAEARHLLAEEGGGERARALLAVAARAEDEQVSHEAKALMRSHDAV >Mature_633_residues MLRKLVLASCLVLAGIGTAVPSAWGVGVEAPRVTSLLHQPLRAVLPLSGAEGIAPRRFEVHLADAAAFEAAGVDTSALAL PLRVTVPEGGASPRILITSETPVTQSYLELLLSISWPGGRLQAPVTLLLDPPGYALTSHAGGERASSSQRQTSRPKADAQ AVSASSPAPAPTAAAAPAAKPASEASRAAELEAALQALRVRLARVEHERDALAERLAARESPRPATVADLSGVAALLAQA PAATSSSEPAAATSTAASEAASSGGAAVEQAPPEATPGEDAGFSWLLPLQLALLAALVTLLGIWGWQRWRRGREATYQEV ANQLGATETGAKARPGLGKDDGPETATIDEADIYMAYGRYDQAREWLQARLAEQESTELRLKLLTALGELGEMTAMAREA ERFAPSADAETRREADALLAHYRQLASTRADAAPQASAGASEVDRLFEDAAPTPREPEDGAPATAAEVPAERDVSPSASA TPEAFEARPPSTRVEHGEDEAPATSPVDEAATPAPRPDAEAQPLEFEPPEIPEAPSRLDYQLPDVETGDEDDAPERLSTL AHDTSGWEVEEVAFEPRDLDNERPAEALAEARHLLAEEGGGERARALLAVAARAEDEQVSHEAKALMRSHDAV
Specific function: Unknown
COG id: COG3170
COG function: function code NU; Tfp pilus assembly protein FimV
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66292; Mature: 66292
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRKLVLASCLVLAGIGTAVPSAWGVGVEAPRVTSLLHQPLRAVLPLSGAEGIAPRRFEV CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE HLADAAAFEAAGVDTSALALPLRVTVPEGGASPRILITSETPVTQSYLELLLSISWPGGR EEHHHHHHHHCCCCHHHEEEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCC LQAPVTLLLDPPGYALTSHAGGERASSSQRQTSRPKADAQAVSASSPAPAPTAAAAPAAK CCCCEEEEECCCCCEEECCCCCCCCCCHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCC PASEASRAAELEAALQALRVRLARVEHERDALAERLAARESPRPATVADLSGVAALLAQA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC PAATSSSEPAAATSTAASEAASSGGAAVEQAPPEATPGEDAGFSWLLPLQLALLAALVTL CCCCCCCCCCHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH LGIWGWQRWRRGREATYQEVANQLGATETGAKARPGLGKDDGPETATIDEADIYMAYGRY HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC DQAREWLQARLAEQESTELRLKLLTALGELGEMTAMAREAERFAPSADAETRREADALLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH HYRQLASTRADAAPQASAGASEVDRLFEDAAPTPREPEDGAPATAAEVPAERDVSPSASA HHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC TPEAFEARPPSTRVEHGEDEAPATSPVDEAATPAPRPDAEAQPLEFEPPEIPEAPSRLDY CCHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QLPDVETGDEDDAPERLSTLAHDTSGWEVEEVAFEPRDLDNERPAEALAEARHLLAEEGG CCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC GERARALLAVAARAEDEQVSHEAKALMRSHDAV CHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLRKLVLASCLVLAGIGTAVPSAWGVGVEAPRVTSLLHQPLRAVLPLSGAEGIAPRRFEV CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE HLADAAAFEAAGVDTSALALPLRVTVPEGGASPRILITSETPVTQSYLELLLSISWPGGR EEHHHHHHHHCCCCHHHEEEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCC LQAPVTLLLDPPGYALTSHAGGERASSSQRQTSRPKADAQAVSASSPAPAPTAAAAPAAK CCCCEEEEECCCCCEEECCCCCCCCCCHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCC PASEASRAAELEAALQALRVRLARVEHERDALAERLAARESPRPATVADLSGVAALLAQA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC PAATSSSEPAAATSTAASEAASSGGAAVEQAPPEATPGEDAGFSWLLPLQLALLAALVTL CCCCCCCCCCHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH LGIWGWQRWRRGREATYQEVANQLGATETGAKARPGLGKDDGPETATIDEADIYMAYGRY HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC DQAREWLQARLAEQESTELRLKLLTALGELGEMTAMAREAERFAPSADAETRREADALLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH HYRQLASTRADAAPQASAGASEVDRLFEDAAPTPREPEDGAPATAAEVPAERDVSPSASA HHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC TPEAFEARPPSTRVEHGEDEAPATSPVDEAATPAPRPDAEAQPLEFEPPEIPEAPSRLDY CCHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QLPDVETGDEDDAPERLSTLAHDTSGWEVEEVAFEPRDLDNERPAEALAEARHLLAEEGG CCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC GERARALLAVAARAEDEQVSHEAKALMRSHDAV CHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA