Click here to switch to the map view.

The map label for this gene is sufB [C]

Identifier: 92113359

GI number: 92113359

Start: 1411649

End: 1413091

Strand: Direct

Name: sufB [C]

Synonym: Csal_1233

Alternate gene names: 92113359

Gene position: 1411649-1413091 (Clockwise)

Preceding gene: 92113358

Following gene: 92113360

Centisome position: 38.19

GC content: 61.68

Gene sequence:

>1443_bases
ATGGCAAGTCAGGAAATGGAACAGCTTGTCCGTCGCGAATATACCCAAGGGTTCGTGACCGACATCGAAAGCGATACCGT
ACCGCCGGGGCTGGACGAGGATACCATCGCCTTCATTTCCAACAAGAAGGGCGAACCCGAGTGGATGCTGGAGTGGCGCC
TGGATGCCTACCACCAGTGGCTCAAGATGAAGGAGCCCTCCTGGGCGCATCTCGATTATCCGCCCATCGACTATCAGGCG
ATTTCCTACTACAGCGCGCCGAAAAAGCCCGAGGATCGGCCGCAGAGTCTCGATGAAGTCGATCCCAAGCTGCTGGAAAC
CTACGAGAAACTGGGGATTCCGCTGCATGAGCGTGCCGCGCTGGCGGGGGTCGCCGTGGATGCGGTATTCGACTCGGTCT
CGGTGACCACGACGTTCAAGGAAAAGCTCGCCGAGGCGGGCGTGATCTTCTGCTCGATCTCGGAGGCGATCCGCGACTAC
CCGGAGCTGGTCCGCCAGTACCTGGGAAGCGTGGTGCCCAAGGGGGATAACTACTTCGCGGCGCTGAATTCGGCCGTATT
CACCGACGGCTCCTTCGTCTACGTTCCCGAAGGCGTCGAGTGCCCGATGGAGCTTTCCACCTATTTCCGCATCAACGCGG
CGAATACCGGTCAGTTCGAGCGCACCCTGATCGTCTGCGACAAGCAGGCCCAGGTCTCGTATCTGGAGGGGTGCACCGCA
CCTCAGCGTGACGAGAACCAGCTCCACGCGGCGGTGGTCGAACTGGTGGCGTTGGAAGACGCCTACATCAAGTATTCCAC
GGTGCAGAACTGGTATCCCGGCGACGAGGACGGCAAGGGCGGCATCTACAACTTCGTCACCAAGCGCGGCGATTGCCGGG
GCGACCGTTCCAAGATCAGCTGGACGCAGGTCGAGACCGGTTCGGCGATCACCTGGAAGTATCCGTCCTGCGTGTTGCGC
GGCAAGGACAGTGTCGGCGAGTTCTATTCCGTGGCGGTGACCAATGGCCGTCAGCAGGCCGACACCGGCACCAAGATGAT
TCACGTCGGCGAGGGGACGCGCTCGACCATCGTGTCCAAGGGCATCGCCGCCGGGAACAGCGACCAAGCCTATCGCGGCC
TGGTCAAGGTGGGGCCGCGCGCCAAGGGCGCGCGCAACTTCACCCAGTGCGACTCGCTGTTGATCGGCGATCGCTGTGGC
GCCCACACCTTTCCGTATCAGGAAATCGGCAACAGCTCGGCGACCGTGGAACACGAGGCGACCACCTCGAAGATCGGTGA
GGACCAGCTGTTCTACTGCCAGGCGCGGGGCATCTCCGAAGAGGATGCCGTCAACATGATCGTCAATGGCTTCTGCAAGG
ACGTCTTCCAGGAGCTGCCGATGGAATTCGCGGTGGAAGCCGAAGCGCTGTTGAACGTCACCCTCGAAGGCGCCGTCGGG
TAA

Upstream 100 bases:

>100_bases
GTGACCCTGGCGAGTCGCGCCGAAGTTTGATCACACGAACGAAAGTGGCGCGGTGGCCCGGCCACGCGCTGAGAGCATAC
CGCCCGGGAGGGGAAACACC

Downstream 100 bases:

>100_bases
GCATTCCGGCGCATCGTCAAGGTTTCAACCCATGTATCGGAGTCGCCCGGCGACTCGAACGCAAGCAAGGTATCAAGATG
CTCGAAGTCAAAGATCTGCA

Product: cysteine desulfurase activator complex subunit SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 480; Mature: 479

Protein sequence:

>480_residues
MASQEMEQLVRREYTQGFVTDIESDTVPPGLDEDTIAFISNKKGEPEWMLEWRLDAYHQWLKMKEPSWAHLDYPPIDYQA
ISYYSAPKKPEDRPQSLDEVDPKLLETYEKLGIPLHERAALAGVAVDAVFDSVSVTTTFKEKLAEAGVIFCSISEAIRDY
PELVRQYLGSVVPKGDNYFAALNSAVFTDGSFVYVPEGVECPMELSTYFRINAANTGQFERTLIVCDKQAQVSYLEGCTA
PQRDENQLHAAVVELVALEDAYIKYSTVQNWYPGDEDGKGGIYNFVTKRGDCRGDRSKISWTQVETGSAITWKYPSCVLR
GKDSVGEFYSVAVTNGRQQADTGTKMIHVGEGTRSTIVSKGIAAGNSDQAYRGLVKVGPRAKGARNFTQCDSLLIGDRCG
AHTFPYQEIGNSSATVEHEATTSKIGEDQLFYCQARGISEEDAVNMIVNGFCKDVFQELPMEFAVEAEALLNVTLEGAVG

Sequences:

>Translated_480_residues
MASQEMEQLVRREYTQGFVTDIESDTVPPGLDEDTIAFISNKKGEPEWMLEWRLDAYHQWLKMKEPSWAHLDYPPIDYQA
ISYYSAPKKPEDRPQSLDEVDPKLLETYEKLGIPLHERAALAGVAVDAVFDSVSVTTTFKEKLAEAGVIFCSISEAIRDY
PELVRQYLGSVVPKGDNYFAALNSAVFTDGSFVYVPEGVECPMELSTYFRINAANTGQFERTLIVCDKQAQVSYLEGCTA
PQRDENQLHAAVVELVALEDAYIKYSTVQNWYPGDEDGKGGIYNFVTKRGDCRGDRSKISWTQVETGSAITWKYPSCVLR
GKDSVGEFYSVAVTNGRQQADTGTKMIHVGEGTRSTIVSKGIAAGNSDQAYRGLVKVGPRAKGARNFTQCDSLLIGDRCG
AHTFPYQEIGNSSATVEHEATTSKIGEDQLFYCQARGISEEDAVNMIVNGFCKDVFQELPMEFAVEAEALLNVTLEGAVG
>Mature_479_residues
ASQEMEQLVRREYTQGFVTDIESDTVPPGLDEDTIAFISNKKGEPEWMLEWRLDAYHQWLKMKEPSWAHLDYPPIDYQAI
SYYSAPKKPEDRPQSLDEVDPKLLETYEKLGIPLHERAALAGVAVDAVFDSVSVTTTFKEKLAEAGVIFCSISEAIRDYP
ELVRQYLGSVVPKGDNYFAALNSAVFTDGSFVYVPEGVECPMELSTYFRINAANTGQFERTLIVCDKQAQVSYLEGCTAP
QRDENQLHAAVVELVALEDAYIKYSTVQNWYPGDEDGKGGIYNFVTKRGDCRGDRSKISWTQVETGSAITWKYPSCVLRG
KDSVGEFYSVAVTNGRQQADTGTKMIHVGEGTRSTIVSKGIAAGNSDQAYRGLVKVGPRAKGARNFTQCDSLLIGDRCGA
HTFPYQEIGNSSATVEHEATTSKIGEDQLFYCQARGISEEDAVNMIVNGFCKDVFQELPMEFAVEAEALLNVTLEGAVG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=479, Percent_Identity=62.0041753653445, Blast_Score=630, Evalue=0.0,
Organism=Escherichia coli, GI1787971, Length=153, Percent_Identity=27.4509803921569, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 53135; Mature: 53004

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASQEMEQLVRREYTQGFVTDIESDTVPPGLDEDTIAFISNKKGEPEWMLEWRLDAYHQW
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEHHHHHHH
LKMKEPSWAHLDYPPIDYQAISYYSAPKKPEDRPQSLDEVDPKLLETYEKLGIPLHERAA
HHCCCCCCCCCCCCCCCHHHEEECCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCHHHHHH
LAGVAVDAVFDSVSVTTTFKEKLAEAGVIFCSISEAIRDYPELVRQYLGSVVPKGDNYFA
HHHHHHHHHHCCCEEEHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCE
ALNSAVFTDGSFVYVPEGVECPMELSTYFRINAANTGQFERTLIVCDKQAQVSYLEGCTA
ECCCCEEECCCEEECCCCCCCCCEEEEEEEEECCCCCCCEEEEEEECCCHHHHHHHCCCC
PQRDENQLHAAVVELVALEDAYIKYSTVQNWYPGDEDGKGGIYNFVTKRGDCRGDRSKIS
CCCCHHHHHHHHHHHHHHHHHHEEEEHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEE
WTQVETGSAITWKYPSCVLRGKDSVGEFYSVAVTNGRQQADTGTKMIHVGEGTRSTIVSK
EEEEECCCEEEEECCCEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCHHHHHHH
GIAAGNSDQAYRGLVKVGPRAKGARNFTQCDSLLIGDRCGAHTFPYQEIGNSSATVEHEA
CCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHEEECCCCCCCCCCHHHHCCCCCEEECCC
TTSKIGEDQLFYCQARGISEEDAVNMIVNGFCKDVFQELPMEFAVEAEALLNVTLEGAVG
HHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHEEEEECCCCC
>Mature Secondary Structure 
ASQEMEQLVRREYTQGFVTDIESDTVPPGLDEDTIAFISNKKGEPEWMLEWRLDAYHQW
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEHHHHHHH
LKMKEPSWAHLDYPPIDYQAISYYSAPKKPEDRPQSLDEVDPKLLETYEKLGIPLHERAA
HHCCCCCCCCCCCCCCCHHHEEECCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCHHHHHH
LAGVAVDAVFDSVSVTTTFKEKLAEAGVIFCSISEAIRDYPELVRQYLGSVVPKGDNYFA
HHHHHHHHHHCCCEEEHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCE
ALNSAVFTDGSFVYVPEGVECPMELSTYFRINAANTGQFERTLIVCDKQAQVSYLEGCTA
ECCCCEEECCCEEECCCCCCCCCEEEEEEEEECCCCCCCEEEEEEECCCHHHHHHHCCCC
PQRDENQLHAAVVELVALEDAYIKYSTVQNWYPGDEDGKGGIYNFVTKRGDCRGDRSKIS
CCCCHHHHHHHHHHHHHHHHHHEEEEHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEE
WTQVETGSAITWKYPSCVLRGKDSVGEFYSVAVTNGRQQADTGTKMIHVGEGTRSTIVSK
EEEEECCCEEEEECCCEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCHHHHHHH
GIAAGNSDQAYRGLVKVGPRAKGARNFTQCDSLLIGDRCGAHTFPYQEIGNSSATVEHEA
CCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHEEECCCCCCCCCCHHHHCCCCCEEECCC
TTSKIGEDQLFYCQARGISEEDAVNMIVNGFCKDVFQELPMEFAVEAEALLNVTLEGAVG
HHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]