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The map label for this gene is aau3 [H]

Identifier: 92113358

GI number: 92113358

Start: 1411111

End: 1411578

Strand: Direct

Name: aau3 [H]

Synonym: Csal_1232

Alternate gene names: 92113358

Gene position: 1411111-1411578 (Clockwise)

Preceding gene: 92113354

Following gene: 92113359

Centisome position: 38.17

GC content: 64.74

Gene sequence:

>468_bases
ATGTTGAAGCTTTCCAAGCTGACCGACTATGCCGCCGTGGTGATGGCGCAGATCGCGCGTCATCCGGAGCAGGCACACGC
CGCCACCGAGCTGGCCGATGCCGTGCAATTGCCCCATCCGACCGTCAGCAAGACGCTGAAAATGCTGGTGAAGGCAGGGC
TTCTGGAATCGCGTCGCGGCTCGCTCGGCGGTTATCGGTTGGCGCGGCCGGCGGCGGCCATCACCGCTTCCGATATCATC
GGCGCCATTGAAGGGCCGGTGGCGATGACGGAATGCAGTCATGCCGATGGCGACTGCGATCTGCTGGCCACCTGCGGCGT
CGCCGACAACTGGCAACGTGTCTCGCTGGCGATTCGTACGCTGCTCGACAGCGTGACCCTGGCGCACCTGGCCCAGGAAA
CGCCGTTGAAGCTGCCCGTGCAGCTGCCCATACAGAGCGTGACCCTGGCGAGTCGCGCCGAAGTTTGA

Upstream 100 bases:

>100_bases
GCTATCATCGCGTGGAAAGGCCGGAAGTCGTCGGTTCCCTTCACATCGAATTCATATAGGACTAAAATGGTACCCAATCG
ATGAATGGTGGAGTGAAGGC

Downstream 100 bases:

>100_bases
TCACACGAACGAAAGTGGCGCGGTGGCCCGGCCACGCGCTGAGAGCATACCGCCCGGGAGGGGAAACACCATGGCAAGTC
AGGAAATGGAACAGCTTGTC

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MLKLSKLTDYAAVVMAQIARHPEQAHAATELADAVQLPHPTVSKTLKMLVKAGLLESRRGSLGGYRLARPAAAITASDII
GAIEGPVAMTECSHADGDCDLLATCGVADNWQRVSLAIRTLLDSVTLAHLAQETPLKLPVQLPIQSVTLASRAEV

Sequences:

>Translated_155_residues
MLKLSKLTDYAAVVMAQIARHPEQAHAATELADAVQLPHPTVSKTLKMLVKAGLLESRRGSLGGYRLARPAAAITASDII
GAIEGPVAMTECSHADGDCDLLATCGVADNWQRVSLAIRTLLDSVTLAHLAQETPLKLPVQLPIQSVTLASRAEV
>Mature_155_residues
MLKLSKLTDYAAVVMAQIARHPEQAHAATELADAVQLPHPTVSKTLKMLVKAGLLESRRGSLGGYRLARPAAAITASDII
GAIEGPVAMTECSHADGDCDLLATCGVADNWQRVSLAIRTLLDSVTLAHLAQETPLKLPVQLPIQSVTLASRAEV

Specific function: Required for growth utilizing PHB cycle intermediates [H]

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790621, Length=134, Percent_Identity=28.3582089552239, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 16369; Mature: 16369

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLSKLTDYAAVVMAQIARHPEQAHAATELADAVQLPHPTVSKTLKMLVKAGLLESRRG
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
SLGGYRLARPAAAITASDIIGAIEGPVAMTECSHADGDCDLLATCGVADNWQRVSLAIRT
CCCCCHHHCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHH
LLDSVTLAHLAQETPLKLPVQLPIQSVTLASRAEV
HHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHCCC
>Mature Secondary Structure
MLKLSKLTDYAAVVMAQIARHPEQAHAATELADAVQLPHPTVSKTLKMLVKAGLLESRRG
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
SLGGYRLARPAAAITASDIIGAIEGPVAMTECSHADGDCDLLATCGVADNWQRVSLAIRT
CCCCCHHHCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHH
LLDSVTLAHLAQETPLKLPVQLPIQSVTLASRAEV
HHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10735852; 11481430 [H]