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The map label for this gene is ybgK [H]

Identifier: 92113159

GI number: 92113159

Start: 1161490

End: 1162407

Strand: Direct

Name: ybgK [H]

Synonym: Csal_1031

Alternate gene names: 92113159

Gene position: 1161490-1162407 (Clockwise)

Preceding gene: 92113158

Following gene: 92113161

Centisome position: 31.42

GC content: 71.13

Gene sequence:

>918_bases
ATGAAAGGGTTGGTCGTCGAACGCGCGGGACCGTTGGCGCTGATTCAGGATGGCGGGCGCTTCGGCGTGCGTCACCTTGG
CGTGACCCAGGGAGGCGCCGCCGATTGGGTGTCGCTGGGCTGGGCCAACTGGTTGCTGGGGAACGCGCCTCAGGCCGCGG
GGCTGGAGATTACCGTGGGCGGCCTGACGCTCTGTGCCGAGACCTCGGCCACGCTGGCCCTGACGGGCGCGGATCTCGGT
GCCACGCTCGACGAGACGCCGCTGGCACCGGGGGCCAGTTTCACCATCGCACCCGGCCAGCGCCTGGCCTTCGAGCGTCC
GCGTGCCGGTCTCCGCGCTTATCTCGCGTTTCCCGGCGGGCTCGAGGCGCCCTCCGTGCTGGGCAGTGTGGCCAGCACGG
TACGCGAGGGCCTGGGCGGTCTCGAGGGGCAGGGCGGGACGCTTGGCGAGGGCGACAGGCTGGTCTGGTCGGGCCATGGC
GAGCCCGGACGCCGTCTGCCGGATGACGCCAGCACCCTGCCGGGCGAAAACCCGCATCTGGCCCTGGTGAGCGGCGCGCA
GATCGCCGGCTTCAGCGGTACCAGCGTGTTCGAGGCGTTCAATGCCGCCTGGACCGTCGACCAGCGTGCCGATCGCATGG
GCGTGCGACTGACCGGCCCCGAACTGCGCTACCTGGGGGCGGGCATGGTGTCGGAAGGCATTCCCCTGGGAGCCGTTCAG
GTACCTGCCGACGGCCAACCCATCATCCTGCTCAACGACCGCCAGACCATCGGCGGCTATCCGCGTCTCGGCGCCCTGAC
GCCACTGGCGTGCGCGCAACTGGCGCAATGCGTGCCGGGCACGCAGTTACGCCTGAGGCCGGTCACCGCCAGCCAGGCCC
GCGAGGCGCATTTACGGCAACTCGCGCGCTGGCGCTGA

Upstream 100 bases:

>100_bases
AAGTGCGCTTCGAGGCGATTTCCCGCGAGGCCTTCATCGAGCAGGGCGGCGACCCGACACCGCTGGCAGAGCGCGGCGAT
ACACCGACGGAGGAACAGGC

Downstream 100 bases:

>100_bases
CGAAGACGCGAGTGGCGGAACGTCAATCCCGTTCCGCCGCTCGCATCGGCATCTGATCGATGAGGTGATAGACCGTCTCC
GGTGCCACGAACCCCTCGAG

Product: allophanate hydrolase subunit 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MKGLVVERAGPLALIQDGGRFGVRHLGVTQGGAADWVSLGWANWLLGNAPQAAGLEITVGGLTLCAETSATLALTGADLG
ATLDETPLAPGASFTIAPGQRLAFERPRAGLRAYLAFPGGLEAPSVLGSVASTVREGLGGLEGQGGTLGEGDRLVWSGHG
EPGRRLPDDASTLPGENPHLALVSGAQIAGFSGTSVFEAFNAAWTVDQRADRMGVRLTGPELRYLGAGMVSEGIPLGAVQ
VPADGQPIILLNDRQTIGGYPRLGALTPLACAQLAQCVPGTQLRLRPVTASQAREAHLRQLARWR

Sequences:

>Translated_305_residues
MKGLVVERAGPLALIQDGGRFGVRHLGVTQGGAADWVSLGWANWLLGNAPQAAGLEITVGGLTLCAETSATLALTGADLG
ATLDETPLAPGASFTIAPGQRLAFERPRAGLRAYLAFPGGLEAPSVLGSVASTVREGLGGLEGQGGTLGEGDRLVWSGHG
EPGRRLPDDASTLPGENPHLALVSGAQIAGFSGTSVFEAFNAAWTVDQRADRMGVRLTGPELRYLGAGMVSEGIPLGAVQ
VPADGQPIILLNDRQTIGGYPRLGALTPLACAQLAQCVPGTQLRLRPVTASQAREAHLRQLARWR
>Mature_305_residues
MKGLVVERAGPLALIQDGGRFGVRHLGVTQGGAADWVSLGWANWLLGNAPQAAGLEITVGGLTLCAETSATLALTGADLG
ATLDETPLAPGASFTIAPGQRLAFERPRAGLRAYLAFPGGLEAPSVLGSVASTVREGLGGLEGQGGTLGEGDRLVWSGHG
EPGRRLPDDASTLPGENPHLALVSGAQIAGFSGTSVFEAFNAAWTVDQRADRMGVRLTGPELRYLGAGMVSEGIPLGAVQ
VPADGQPIILLNDRQTIGGYPRLGALTPLACAQLAQCVPGTQLRLRPVTASQAREAHLRQLARWR

Specific function: Unknown

COG id: COG1984

COG function: function code E; Allophanate hydrolase subunit 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786930, Length=309, Percent_Identity=36.8932038834951, Blast_Score=171, Evalue=4e-44,
Organism=Saccharomyces cerevisiae, GI6319685, Length=304, Percent_Identity=25.3289473684211, Blast_Score=91, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003778 [H]

Pfam domain/function: PF02626 AHS2 [H]

EC number: NA

Molecular weight: Translated: 31455; Mature: 31455

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGLVVERAGPLALIQDGGRFGVRHLGVTQGGAADWVSLGWANWLLGNAPQAAGLEITVG
CCCEEEECCCCEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEC
GLTLCAETSATLALTGADLGATLDETPLAPGASFTIAPGQRLAFERPRAGLRAYLAFPGG
CEEEEECCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCHHCCCCCCCCEEEEEECCCC
LEAPSVLGSVASTVREGLGGLEGQGGTLGEGDRLVWSGHGEPGRRLPDDASTLPGENPHL
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCE
ALVSGAQIAGFSGTSVFEAFNAAWTVDQRADRMGVRLTGPELRYLGAGMVSEGIPLGAVQ
EEEECCEEECCCCCHHHHHHCCEEEECCHHHHCCEEECCCCCEECCCCHHHCCCCCCEEE
VPADGQPIILLNDRQTIGGYPRLGALTPLACAQLAQCVPGTQLRLRPVTASQAREAHLRQ
CCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHH
LARWR
HHHCC
>Mature Secondary Structure
MKGLVVERAGPLALIQDGGRFGVRHLGVTQGGAADWVSLGWANWLLGNAPQAAGLEITVG
CCCEEEECCCCEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEC
GLTLCAETSATLALTGADLGATLDETPLAPGASFTIAPGQRLAFERPRAGLRAYLAFPGG
CEEEEECCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCHHCCCCCCCCEEEEEECCCC
LEAPSVLGSVASTVREGLGGLEGQGGTLGEGDRLVWSGHGEPGRRLPDDASTLPGENPHL
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCE
ALVSGAQIAGFSGTSVFEAFNAAWTVDQRADRMGVRLTGPELRYLGAGMVSEGIPLGAVQ
EEEECCEEECCCCCHHHHHHCCEEEECCHHHHCCEEECCCCCEECCCCHHHCCCCCCEEE
VPADGQPIILLNDRQTIGGYPRLGALTPLACAQLAQCVPGTQLRLRPVTASQAREAHLRQ
CCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHH
LARWR
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]