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The map label for this gene is ybgL [C]

Identifier: 92113157

GI number: 92113157

Start: 1160005

End: 1160757

Strand: Direct

Name: ybgL [C]

Synonym: Csal_1029

Alternate gene names: 92113157

Gene position: 1160005-1160757 (Clockwise)

Preceding gene: 92113151

Following gene: 92113158

Centisome position: 31.38

GC content: 67.6

Gene sequence:

>753_bases
ATGCCCCTACCGCTTCTCAATTGCGACATGGGAGAAAGCTTCGGCAACTGGAAAATGGGCCTCGACGACGAGGTCATGCC
CTACGTCGACTGCGCCAATATCGCCTGCGGATTCCATGCCTCGGACCCCGGCATCATGCGTCGCACCGTGGCATTGGCCG
TGCAGCATGGCGTACGTGTCGGCGCGCATCCCGCCTACCCGGATCTGCAAGGCTTCGGACGCCGCTCGCTGGCCTGTTCG
CCGCGTGAAGTCGAGGACATGATGCTGTATCAGATCGGCGCGCTGGAGGGCATGTGCCGCGCCGAAGGGACGCGTGTGGC
CTACGTCAAACCGCATGGCGCGCTGTACAACGACATGGCCCGCGACCCGGAGCTTCTGCGCGGCGCCATGCGGGCGGTGC
TGGCCTACGATCCCGAACTGCCGCTGCTGGCCATGGCCACGGCGGACCCGGCGCCGATGCGGGCGCTGGCCGAGGAAATG
GGCGTGACGCTGTGGTTCGAGACCTTCGCGGACCGGGCCTACGACCCCCAGGGGCGTTTGGTGTCGCGGCGTGAGCCCGG
GGCGGTGCACCACGATCGCGAGGCCATCGTGGCCCAGGCGGTGACGCTCGCCAGGGGAGAGCCGTTGACGGCCAACGACG
GCAGCTTGCTGCACCTGCCGGCGGATACCTTGTGCGTGCATGGCGACAACGCCGAATCGGTAGCTGCCGTACGCGCCATT
CGCGATGCCTTCGATGGCCTGGCGCGGGAGTGA

Upstream 100 bases:

>100_bases
TCACGCATCACGAAAAACGATTGGACCGGGCCGAGCGGGCTTTCTTAGAGTGAAACGCCGCATTCGTGAAAGCCGACGAC
AACAAGCAGAGGTCACGTTC

Downstream 100 bases:

>100_bases
GCCGGTGAACGACCCGAAAATCGAAACGGTGGGCATGGACACGCTCATCGTGCGCCTGTTCGACGGCATCGATGAAGCTC
ACATGCCATGGATGCTGGCC

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MPLPLLNCDMGESFGNWKMGLDDEVMPYVDCANIACGFHASDPGIMRRTVALAVQHGVRVGAHPAYPDLQGFGRRSLACS
PREVEDMMLYQIGALEGMCRAEGTRVAYVKPHGALYNDMARDPELLRGAMRAVLAYDPELPLLAMATADPAPMRALAEEM
GVTLWFETFADRAYDPQGRLVSRREPGAVHHDREAIVAQAVTLARGEPLTANDGSLLHLPADTLCVHGDNAESVAAVRAI
RDAFDGLARE

Sequences:

>Translated_250_residues
MPLPLLNCDMGESFGNWKMGLDDEVMPYVDCANIACGFHASDPGIMRRTVALAVQHGVRVGAHPAYPDLQGFGRRSLACS
PREVEDMMLYQIGALEGMCRAEGTRVAYVKPHGALYNDMARDPELLRGAMRAVLAYDPELPLLAMATADPAPMRALAEEM
GVTLWFETFADRAYDPQGRLVSRREPGAVHHDREAIVAQAVTLARGEPLTANDGSLLHLPADTLCVHGDNAESVAAVRAI
RDAFDGLARE
>Mature_249_residues
PLPLLNCDMGESFGNWKMGLDDEVMPYVDCANIACGFHASDPGIMRRTVALAVQHGVRVGAHPAYPDLQGFGRRSLACSP
REVEDMMLYQIGALEGMCRAEGTRVAYVKPHGALYNDMARDPELLRGAMRAVLAYDPELPLLAMATADPAPMRALAEEMG
VTLWFETFADRAYDPQGRLVSRREPGAVHHDREAIVAQAVTLARGEPLTANDGSLLHLPADTLCVHGDNAESVAAVRAIR
DAFDGLARE

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family

Homologues:

Organism=Escherichia coli, GI1786931, Length=239, Percent_Identity=39.7489539748954, Blast_Score=170, Evalue=9e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1029_CHRSD (Q1QYS2)

Other databases:

- EMBL:   CP000285
- RefSeq:   YP_573085.1
- ProteinModelPortal:   Q1QYS2
- SMR:   Q1QYS2
- STRING:   Q1QYS2
- GeneID:   4027800
- GenomeReviews:   CP000285_GR
- KEGG:   csa:Csal_1029
- NMPDR:   fig|290398.4.peg.1050
- eggNOG:   COG1540
- HOGENOM:   HBG482818
- OMA:   GRRSMAC
- ProtClustDB:   PRK05406
- BioCyc:   CSAL290398:CSAL_1029-MONOMER
- HAMAP:   MF_00691
- InterPro:   IPR011330
- InterPro:   IPR005501

Pfam domain/function: PF03746 LamB_YcsF; SSF88713 Glyco_hydro/deAcase_b/a-brl

EC number: NA

Molecular weight: Translated: 27141; Mature: 27010

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLPLLNCDMGESFGNWKMGLDDEVMPYVDCANIACGFHASDPGIMRRTVALAVQHGVRV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEECCCCCCCHHHHHHHHHHHHHCCEE
GAHPAYPDLQGFGRRSLACSPREVEDMMLYQIGALEGMCRAEGTRVAYVKPHGALYNDMA
CCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHC
RDPELLRGAMRAVLAYDPELPLLAMATADPAPMRALAEEMGVTLWFETFADRAYDPQGRL
CCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCEEEEHHHHCCCCCCCCCE
VSRREPGAVHHDREAIVAQAVTLARGEPLTANDGSLLHLPADTLCVHGDNAESVAAVRAI
ECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEECCCHHHHHHHHHH
RDAFDGLARE
HHHHHHHCCC
>Mature Secondary Structure 
PLPLLNCDMGESFGNWKMGLDDEVMPYVDCANIACGFHASDPGIMRRTVALAVQHGVRV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEECCCCCCCHHHHHHHHHHHHHCCEE
GAHPAYPDLQGFGRRSLACSPREVEDMMLYQIGALEGMCRAEGTRVAYVKPHGALYNDMA
CCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHC
RDPELLRGAMRAVLAYDPELPLLAMATADPAPMRALAEEMGVTLWFETFADRAYDPQGRL
CCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCEEEEHHHHCCCCCCCCCE
VSRREPGAVHHDREAIVAQAVTLARGEPLTANDGSLLHLPADTLCVHGDNAESVAAVRAI
ECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEECCCHHHHHHHHHH
RDAFDGLARE
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA