BacMap

Definition	Chromohalobacter salexigens DSM 3043 chromosome, complete genome.
Accession	NC_007963
Length	3,696,649

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The map label for this gene is yxbG [H]

Identifier: 92113150

GI number: 92113150

Start: 1153329

End: 1154114

Strand: Direct

Name: yxbG [H]

Synonym: Csal_1022

Alternate gene names: 92113150

Gene position: 1153329-1154114 (Clockwise)

Preceding gene: 92113149

Following gene: 92113151

Centisome position: 31.2

GC content: 67.68

Gene sequence:

>786_bases
ATGCCGGAAAGGGCACCGCGTCTGCGCGGCAAGCATGTCTTCATCACCGGGGCCGCGGCCGGCATCGGCCGGGCCATGGC
CGAGGCCTGCGTTCAGGAAGGTGCGCGCGTCTCGCTGGCGGATATCGATCTCGAGGGCGTGCAAGCCGTCGCCCGGCAAC
TGCGCGATACCGGCGGGGTGGCAGTGGCGATGAGCTGCGATATCGCCGAGCCCGCGTCGGTGGACGCGGCGCTCGAGGCG
GCTCGGGGAGCCCATGGGCCGATCACGACCCTGATCAACAACGCCGGGCGCAACGTCTTCCACACGCCGCTTGAAATGCC
CGAGGCTGCCTGGCAGCGCTGCATGTCGGTGGACCTGGAGGGCGCCTGGCATTGCGCGCGCGGTGTGTTGCCGGACATGC
TCGCGCAGGCGAGCGGCAGCATCATCAACGTGGCCTCGACCCATGCGTTTTCCATCCTGCCGGGTTGCTTTCCCTATGCG
GTGGCCAAGCACGGTCTGATGGGGCTGACGCGATCGCTGGGGATCGAATATGCTCGACAAGGCGTTCGCGTCAATGCCAT
CGCGCCGGGCTATATCGCCACGCCCGCGGTCGAGGCACACTGGCAACGATTCGACGATCCGGACGCGGCCAGGCAGCGGA
TCGAGGCGCTGTTGCCGCCGGGGCGCCTGGGAGCGCCGCGAGAGGTCGCCATGACCGCGGTCTTTCTCGCCTCCGACGAG
GCACCGTTCATCAACGCAAGCTGTATCACCATCGATGGCGGGCGCAGCGTGGTCTATCACGATTGA

Upstream 100 bases:

>100_bases
ACGTACCGACCTTCTATCAGTACCTGGTACGCGGGGCGATCCTGCTGCTGGCGGTGATGTTCGATCGCTGGAAGCAAACC
CGGCGCGCCAAGGGATGACG

Downstream 100 bases:

>100_bases
GCGACCCACCGTCACCGATTCGACCTTCAGGAGAGCCCATCACATGCAACTCGCACAAGCCCGGAACGACAACGGCGAGC
GTTTCGTCCTGGTCATCGAG

Product: short chain dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MPERAPRLRGKHVFITGAAAGIGRAMAEACVQEGARVSLADIDLEGVQAVARQLRDTGGVAVAMSCDIAEPASVDAALEA
ARGAHGPITTLINNAGRNVFHTPLEMPEAAWQRCMSVDLEGAWHCARGVLPDMLAQASGSIINVASTHAFSILPGCFPYA
VAKHGLMGLTRSLGIEYARQGVRVNAIAPGYIATPAVEAHWQRFDDPDAARQRIEALLPPGRLGAPREVAMTAVFLASDE
APFINASCITIDGGRSVVYHD

Sequences:

>Translated_261_residues
MPERAPRLRGKHVFITGAAAGIGRAMAEACVQEGARVSLADIDLEGVQAVARQLRDTGGVAVAMSCDIAEPASVDAALEA
ARGAHGPITTLINNAGRNVFHTPLEMPEAAWQRCMSVDLEGAWHCARGVLPDMLAQASGSIINVASTHAFSILPGCFPYA
VAKHGLMGLTRSLGIEYARQGVRVNAIAPGYIATPAVEAHWQRFDDPDAARQRIEALLPPGRLGAPREVAMTAVFLASDE
APFINASCITIDGGRSVVYHD
>Mature_260_residues
PERAPRLRGKHVFITGAAAGIGRAMAEACVQEGARVSLADIDLEGVQAVARQLRDTGGVAVAMSCDIAEPASVDAALEAA
RGAHGPITTLINNAGRNVFHTPLEMPEAAWQRCMSVDLEGAWHCARGVLPDMLAQASGSIINVASTHAFSILPGCFPYAV
AKHGLMGLTRSLGIEYARQGVRVNAIAPGYIATPAVEAHWQRFDDPDAARQRIEALLPPGRLGAPREVAMTAVFLASDEA
PFINASCITIDGGRSVVYHD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=255, Percent_Identity=29.4117647058824, Blast_Score=124, Evalue=9e-29,
Organism=Homo sapiens, GI19923817, Length=269, Percent_Identity=29.7397769516729, Blast_Score=119, Evalue=2e-27,
Organism=Homo sapiens, GI40254992, Length=244, Percent_Identity=30.7377049180328, Blast_Score=118, Evalue=5e-27,
Organism=Homo sapiens, GI66933014, Length=254, Percent_Identity=32.6771653543307, Blast_Score=116, Evalue=2e-26,
Organism=Homo sapiens, GI15277342, Length=257, Percent_Identity=30.7392996108949, Blast_Score=116, Evalue=2e-26,
Organism=Homo sapiens, GI126723750, Length=258, Percent_Identity=29.0697674418605, Blast_Score=112, Evalue=5e-25,
Organism=Homo sapiens, GI10190704, Length=258, Percent_Identity=29.4573643410853, Blast_Score=99, Evalue=4e-21,
Organism=Homo sapiens, GI59889578, Length=235, Percent_Identity=31.063829787234, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI4758504, Length=260, Percent_Identity=31.9230769230769, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI4503301, Length=254, Percent_Identity=29.9212598425197, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI31542939, Length=271, Percent_Identity=28.7822878228782, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI7705925, Length=252, Percent_Identity=29.3650793650794, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI126723191, Length=188, Percent_Identity=29.2553191489362, Blast_Score=88, Evalue=8e-18,
Organism=Homo sapiens, GI210032110, Length=231, Percent_Identity=24.6753246753247, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI5031737, Length=258, Percent_Identity=25.5813953488372, Blast_Score=85, Evalue=6e-17,
Organism=Homo sapiens, GI40807363, Length=202, Percent_Identity=25.7425742574257, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI4504505, Length=192, Percent_Identity=33.3333333333333, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI83715985, Length=261, Percent_Identity=30.6513409961686, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI109715829, Length=244, Percent_Identity=26.6393442622951, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI4503817, Length=193, Percent_Identity=26.4248704663212, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI33667109, Length=193, Percent_Identity=27.4611398963731, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI302344755, Length=104, Percent_Identity=34.6153846153846, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI224922801, Length=178, Percent_Identity=32.5842696629214, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI25282469, Length=254, Percent_Identity=24.4094488188976, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI7706318, Length=191, Percent_Identity=25.6544502617801, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI142976729, Length=197, Percent_Identity=23.3502538071066, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI40254986, Length=219, Percent_Identity=25.1141552511416, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI209862901, Length=201, Percent_Identity=26.3681592039801, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI19923983, Length=201, Percent_Identity=26.3681592039801, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI150247226, Length=192, Percent_Identity=30.7291666666667, Blast_Score=68, Evalue=9e-12,
Organism=Homo sapiens, GI20149619, Length=193, Percent_Identity=25.3886010362694, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI119392083, Length=209, Percent_Identity=28.2296650717703, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI87082100, Length=254, Percent_Identity=36.6141732283465, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI1787335, Length=251, Percent_Identity=33.4661354581673, Blast_Score=139, Evalue=2e-34,
Organism=Escherichia coli, GI1790717, Length=250, Percent_Identity=32.4, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1788459, Length=243, Percent_Identity=33.3333333333333, Blast_Score=118, Evalue=3e-28,
Organism=Escherichia coli, GI1789208, Length=260, Percent_Identity=31.1538461538462, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1787905, Length=248, Percent_Identity=31.4516129032258, Blast_Score=110, Evalue=8e-26,
Organism=Escherichia coli, GI1786812, Length=261, Percent_Identity=31.8007662835249, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI87082160, Length=255, Percent_Identity=30.1960784313725, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI2367175, Length=253, Percent_Identity=32.4110671936759, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1789378, Length=255, Percent_Identity=27.4509803921569, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI2367365, Length=248, Percent_Identity=29.0322580645161, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1787820, Length=210, Percent_Identity=26.1904761904762, Blast_Score=62, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17561402, Length=256, Percent_Identity=32.8125, Blast_Score=133, Evalue=8e-32,
Organism=Caenorhabditis elegans, GI17536651, Length=258, Percent_Identity=29.4573643410853, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI25147288, Length=252, Percent_Identity=31.3492063492063, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17555706, Length=252, Percent_Identity=30.1587301587302, Blast_Score=112, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17536025, Length=260, Percent_Identity=29.6153846153846, Blast_Score=112, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17561272, Length=247, Percent_Identity=32.7935222672065, Blast_Score=110, Evalue=8e-25,
Organism=Caenorhabditis elegans, GI17563726, Length=272, Percent_Identity=30.1470588235294, Blast_Score=101, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17538480, Length=268, Percent_Identity=30.2238805970149, Blast_Score=101, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17562904, Length=270, Percent_Identity=30.3703703703704, Blast_Score=100, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI17560150, Length=266, Percent_Identity=28.9473684210526, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17562910, Length=270, Percent_Identity=30.3703703703704, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17564282, Length=194, Percent_Identity=29.8969072164948, Blast_Score=97, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI72000259, Length=266, Percent_Identity=27.0676691729323, Blast_Score=97, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17560676, Length=248, Percent_Identity=26.6129032258064, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI193203115, Length=189, Percent_Identity=30.6878306878307, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI71994604, Length=253, Percent_Identity=28.4584980237154, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI71994600, Length=254, Percent_Identity=28.740157480315, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI193203117, Length=190, Percent_Identity=30, Blast_Score=95, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI17562990, Length=265, Percent_Identity=28.3018867924528, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17562906, Length=264, Percent_Identity=26.5151515151515, Blast_Score=91, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI17531453, Length=268, Percent_Identity=26.865671641791, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI115534694, Length=247, Percent_Identity=26.7206477732794, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17551412, Length=274, Percent_Identity=27.7372262773723, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17559104, Length=267, Percent_Identity=26.5917602996255, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17562908, Length=268, Percent_Identity=25.3731343283582, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17565030, Length=269, Percent_Identity=27.8810408921933, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17508895, Length=202, Percent_Identity=26.7326732673267, Blast_Score=84, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17567345, Length=197, Percent_Identity=25.3807106598985, Blast_Score=84, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17560332, Length=268, Percent_Identity=25.3731343283582, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17538182, Length=262, Percent_Identity=25.9541984732824, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI193204405, Length=272, Percent_Identity=26.8382352941176, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17508651, Length=246, Percent_Identity=27.2357723577236, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17538486, Length=265, Percent_Identity=26.0377358490566, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17568967, Length=194, Percent_Identity=30.9278350515464, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17560220, Length=268, Percent_Identity=25.7462686567164, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17544670, Length=271, Percent_Identity=29.1512915129151, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17507613, Length=232, Percent_Identity=27.5862068965517, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI32563809, Length=231, Percent_Identity=27.7056277056277, Blast_Score=74, Evalue=9e-14,
Organism=Saccharomyces cerevisiae, GI6324126, Length=255, Percent_Identity=26.2745098039216, Blast_Score=91, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6322861, Length=253, Percent_Identity=28.8537549407115, Blast_Score=84, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24639444, Length=250, Percent_Identity=32, Blast_Score=121, Evalue=4e-28,
Organism=Drosophila melanogaster, GI21355319, Length=250, Percent_Identity=29.6, Blast_Score=117, Evalue=8e-27,
Organism=Drosophila melanogaster, GI21357041, Length=258, Percent_Identity=30.6201550387597, Blast_Score=115, Evalue=2e-26,
Organism=Drosophila melanogaster, GI23397609, Length=248, Percent_Identity=30.6451612903226, Blast_Score=112, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24644339, Length=254, Percent_Identity=31.8897637795276, Blast_Score=111, Evalue=6e-25,
Organism=Drosophila melanogaster, GI28571526, Length=256, Percent_Identity=29.296875, Blast_Score=100, Evalue=8e-22,
Organism=Drosophila melanogaster, GI17737361, Length=261, Percent_Identity=31.4176245210728, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24644337, Length=255, Percent_Identity=31.7647058823529, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI18859837, Length=192, Percent_Identity=31.7708333333333, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24643142, Length=254, Percent_Identity=28.740157480315, Blast_Score=81, Evalue=6e-16,
Organism=Drosophila melanogaster, GI21356301, Length=203, Percent_Identity=30.0492610837438, Blast_Score=81, Evalue=7e-16,
Organism=Drosophila melanogaster, GI24640492, Length=209, Percent_Identity=27.2727272727273, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI281364892, Length=229, Percent_Identity=27.5109170305677, Blast_Score=78, Evalue=6e-15,
Organism=Drosophila melanogaster, GI21358495, Length=192, Percent_Identity=27.6041666666667, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI116007236, Length=199, Percent_Identity=26.1306532663317, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21357673, Length=216, Percent_Identity=25.9259259259259, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24649181, Length=200, Percent_Identity=26, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24640442, Length=192, Percent_Identity=27.0833333333333, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI221510726, Length=222, Percent_Identity=26.5765765765766, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24580925, Length=200, Percent_Identity=29.5, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 27498; Mature: 27367

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPERAPRLRGKHVFITGAAAGIGRAMAEACVQEGARVSLADIDLEGVQAVARQLRDTGGV
CCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCE
AVAMSCDIAEPASVDAALEAARGAHGPITTLINNAGRNVFHTPLEMPEAAWQRCMSVDLE
EEEEECCCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCC
GAWHCARGVLPDMLAQASGSIINVASTHAFSILPGCFPYAVAKHGLMGLTRSLGIEYARQ
CHHHHHHCHHHHHHHHHCCCEEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GVRVNAIAPGYIATPAVEAHWQRFDDPDAARQRIEALLPPGRLGAPREVAMTAVFLASDE
CCEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHEEEEEECCC
APFINASCITIDGGRSVVYHD
CCEEEEEEEEEECCCEEEECC
>Mature Secondary Structure 
PERAPRLRGKHVFITGAAAGIGRAMAEACVQEGARVSLADIDLEGVQAVARQLRDTGGV
CCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCE
AVAMSCDIAEPASVDAALEAARGAHGPITTLINNAGRNVFHTPLEMPEAAWQRCMSVDLE
EEEEECCCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCC
GAWHCARGVLPDMLAQASGSIINVASTHAFSILPGCFPYAVAKHGLMGLTRSLGIEYARQ
CHHHHHHCHHHHHHHHHCCCEEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GVRVNAIAPGYIATPAVEAHWQRFDDPDAARQRIEALLPPGRLGAPREVAMTAVFLASDE
CCEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHEEEEEECCC
APFINASCITIDGGRSVVYHD
CCEEEEEEEEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584049; 9384377 [H]