| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is 92112788
Identifier: 92112788
GI number: 92112788
Start: 734862
End: 735569
Strand: Direct
Name: 92112788
Synonym: Csal_0656
Alternate gene names: NA
Gene position: 734862-735569 (Clockwise)
Preceding gene: 92112786
Following gene: 92112789
Centisome position: 19.88
GC content: 66.95
Gene sequence:
>708_bases ATGAAGCCTTCGCTTGCCACACTGGCCCTCGGTGGCGTGGTAATCGCCCTGGGCATCGCCCTGGACAAGGGGCTCTGGAC GATCCCGCGTGAATGGAATCCCTTCCAACCCCTGTATCTCGAGGATCCGCTGACGCCAGTGACACAGTGGAAGCTCGGCC GCCTCGCGGAGGATCGCCAGGCATGCCTGGCCACGCTCGAGACGGCGCGACCGGGGACGCTGGCCTACACGCCGCTGGAG GATCATACCCCCGTGGCGGGGTGCCCGCTCGACAACGTGGTGCGCGTCCGGCGCGCCGGGGTCGATTTCAATGCCAGTTT CGTGGCCAGCTGCCCCCTGGCGGTGGCCTGGACGCTCTTCGAGCGACACCGCTTGCAGCCCGCCGCCCGGGACGTGTTCG GTGAGCCGGTTGCGTCGGTGCGTCACTTCGGCAGCTTCGCCTGTCGCAATATCTATCATCGCGACAACGCGCGACGCAGT CAGCATGCCACGGCGGAGGCGCTCGACGTGGCGGCCTTTCGCCTGGCAGACGGGCGGCGCATCGTCTTGCTGGACGACTG GGAGGGCGACGATTCGGCGGCCACGTTCCTGCGCCGTGTGCGCGATGGCGCCTGCGACGTCTTCGGAACCACACTGGGGC CGGACTACAACGCGGCTCATGCCAATCATTTTCATCTGGGCATGCAAGGGATGTCGCTTTGCCGCTGA
Upstream 100 bases:
>100_bases GCATTCAGTGTCGCTCAAATTCTCGCAGTGCACCGCCACAATCGTCGCGTTGCCCGTGGCGTTCGCTACACTGGTGACGT TGCATCGACCGGGAACCCGC
Downstream 100 bases:
>100_bases TCGCGGCGAAGGCGGCATGCAGGGCAGATTGGGGCGTTGCCATGTGCGCGATGGCGTATGAATGTGCCAAACTGGGTTCG ATCATCTCAGCGTTACGTTT
Product: extensin-like protein
Products: NA
Alternate protein names: Extensin-Like Protein; Extensin-Like; Extensin-Like Protein C-Terminus; Extensin Domain Protein; Conserved Protein; Extensin Domain-Containing Protein; Inner Membrane Protein
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MKPSLATLALGGVVIALGIALDKGLWTIPREWNPFQPLYLEDPLTPVTQWKLGRLAEDRQACLATLETARPGTLAYTPLE DHTPVAGCPLDNVVRVRRAGVDFNASFVASCPLAVAWTLFERHRLQPAARDVFGEPVASVRHFGSFACRNIYHRDNARRS QHATAEALDVAAFRLADGRRIVLLDDWEGDDSAATFLRRVRDGACDVFGTTLGPDYNAAHANHFHLGMQGMSLCR
Sequences:
>Translated_235_residues MKPSLATLALGGVVIALGIALDKGLWTIPREWNPFQPLYLEDPLTPVTQWKLGRLAEDRQACLATLETARPGTLAYTPLE DHTPVAGCPLDNVVRVRRAGVDFNASFVASCPLAVAWTLFERHRLQPAARDVFGEPVASVRHFGSFACRNIYHRDNARRS QHATAEALDVAAFRLADGRRIVLLDDWEGDDSAATFLRRVRDGACDVFGTTLGPDYNAAHANHFHLGMQGMSLCR >Mature_235_residues MKPSLATLALGGVVIALGIALDKGLWTIPREWNPFQPLYLEDPLTPVTQWKLGRLAEDRQACLATLETARPGTLAYTPLE DHTPVAGCPLDNVVRVRRAGVDFNASFVASCPLAVAWTLFERHRLQPAARDVFGEPVASVRHFGSFACRNIYHRDNARRS QHATAEALDVAAFRLADGRRIVLLDDWEGDDSAATFLRRVRDGACDVFGTTLGPDYNAAHANHFHLGMQGMSLCR
Specific function: Unknown
COG id: COG3921
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25860; Mature: 25860
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPSLATLALGGVVIALGIALDKGLWTIPREWNPFQPLYLEDPLTPVTQWKLGRLAEDRQ CCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHH ACLATLETARPGTLAYTPLEDHTPVAGCPLDNVVRVRRAGVDFNASFVASCPLAVAWTLF HHHHHHHCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHCHHHHHHHHH ERHRLQPAARDVFGEPVASVRHFGSFACRNIYHRDNARRSQHATAEALDVAAFRLADGRR HHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECCCCE IVLLDDWEGDDSAATFLRRVRDGACDVFGTTLGPDYNAAHANHFHLGMQGMSLCR EEEEECCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEECCCHHHHCC >Mature Secondary Structure MKPSLATLALGGVVIALGIALDKGLWTIPREWNPFQPLYLEDPLTPVTQWKLGRLAEDRQ CCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHH ACLATLETARPGTLAYTPLEDHTPVAGCPLDNVVRVRRAGVDFNASFVASCPLAVAWTLF HHHHHHHCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHCHHHHHHHHH ERHRLQPAARDVFGEPVASVRHFGSFACRNIYHRDNARRSQHATAEALDVAAFRLADGRR HHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECCCCE IVLLDDWEGDDSAATFLRRVRDGACDVFGTTLGPDYNAAHANHFHLGMQGMSLCR EEEEECCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEECCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA