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The map label for this gene is ygaD [H]

Identifier: 92112755

GI number: 92112755

Start: 698457

End: 698981

Strand: Direct

Name: ygaD [H]

Synonym: Csal_0622

Alternate gene names: 92112755

Gene position: 698457-698981 (Clockwise)

Preceding gene: 92112752

Following gene: 92112756

Centisome position: 18.89

GC content: 71.24

Gene sequence:

>525_bases
ATGGCGATAACTCTGGAAGAGTGGCGTGACGTGAGCGTCGATGCCTTGGCCGAGCGCCTCGGGAAAGCGTGCCGGGCGAC
GGGGGCCAGCGTGACGGCGGCCGAATCCTGCACCGGGGGCGGCGTGGCCAGTGCCATCACCGACGTCGCCGGCAGTTCCG
ACTATTTCGAGACCGGCTACGTGACCTACGCCAACAGCGCCAAGCAACGCCTGCTCGGGGTGCGCGAGGCCACGCTTGCC
ACGCATGGCGCGGTCAGCGCCGAGACCGTGCGCGAGATGGTCGCCGGGGCGTGTCGCGATAGCGGCGCCACGCTGGGCGT
GGCGATCAGCGGCGTGGCCGGCCCCGGTGGCGGCAGCGCGGACAAGCCCGTGGGCACGGTCTGGTTCGCCTGGGGCGACG
ATCGGGCGCAGGAGGTCGAGCGCCATCATCTGCCGGGGACGCGCGGCGAGGTGCGTCGCGCTGCGGTGCGCATGGCATTG
ATCGGGCTTGTTGCTAGGCTTGAGGGCGAGAGCGGGCGCGATTGA

Upstream 100 bases:

>100_bases
TCGTGCGCAACTGCCAACACCGCAAGGCGACATTCTACGCTTTCGCGCGGACGGCGTCAGTGCGGCGCCGATCGGTGCGA
CATTGGGGAGAGGATAATAG

Downstream 100 bases:

>100_bases
AAACGCGTGCAAGTCAAAGGTAGGCGGCGCGAATTTTTTTCGTCATACTACTGGCTAGTCATACAGTATTGAGCGGACGG
CGCCGAACTCATTCGGTGTC

Product: CinA-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MAITLEEWRDVSVDALAERLGKACRATGASVTAAESCTGGGVASAITDVAGSSDYFETGYVTYANSAKQRLLGVREATLA
THGAVSAETVREMVAGACRDSGATLGVAISGVAGPGGGSADKPVGTVWFAWGDDRAQEVERHHLPGTRGEVRRAAVRMAL
IGLVARLEGESGRD

Sequences:

>Translated_174_residues
MAITLEEWRDVSVDALAERLGKACRATGASVTAAESCTGGGVASAITDVAGSSDYFETGYVTYANSAKQRLLGVREATLA
THGAVSAETVREMVAGACRDSGATLGVAISGVAGPGGGSADKPVGTVWFAWGDDRAQEVERHHLPGTRGEVRRAAVRMAL
IGLVARLEGESGRD
>Mature_173_residues
AITLEEWRDVSVDALAERLGKACRATGASVTAAESCTGGGVASAITDVAGSSDYFETGYVTYANSAKQRLLGVREATLAT
HGAVSAETVREMVAGACRDSGATLGVAISGVAGPGGGSADKPVGTVWFAWGDDRAQEVERHHLPGTRGEVRRAAVRMALI
GLVARLEGESGRD

Specific function: Unknown

COG id: COG1546

COG function: function code R; Uncharacterized protein (competence- and mitomycin-induced)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CinA family [H]

Homologues:

Organism=Escherichia coli, GI1789052, Length=155, Percent_Identity=53.5483870967742, Blast_Score=152, Evalue=1e-38,
Organism=Escherichia coli, GI1787818, Length=147, Percent_Identity=34.6938775510204, Blast_Score=90, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008136 [H]

Pfam domain/function: PF02464 CinA [H]

EC number: NA

Molecular weight: Translated: 17850; Mature: 17719

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAITLEEWRDVSVDALAERLGKACRATGASVTAAESCTGGGVASAITDVAGSSDYFETGY
CEEEHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCE
VTYANSAKQRLLGVREATLATHGAVSAETVREMVAGACRDSGATLGVAISGVAGPGGGSA
EEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC
DKPVGTVWFAWGDDRAQEVERHHLPGTRGEVRRAAVRMALIGLVARLEGESGRD
CCCCEEEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AITLEEWRDVSVDALAERLGKACRATGASVTAAESCTGGGVASAITDVAGSSDYFETGY
EEEHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCE
VTYANSAKQRLLGVREATLATHGAVSAETVREMVAGACRDSGATLGVAISGVAGPGGGSA
EEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC
DKPVGTVWFAWGDDRAQEVERHHLPGTRGEVRRAAVRMALIGLVARLEGESGRD
CCCCEEEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]