| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is 92112741
Identifier: 92112741
GI number: 92112741
Start: 677596
End: 678666
Strand: Direct
Name: 92112741
Synonym: Csal_0608
Alternate gene names: NA
Gene position: 677596-678666 (Clockwise)
Preceding gene: 92112738
Following gene: 92112742
Centisome position: 18.33
GC content: 65.83
Gene sequence:
>1071_bases ATGACAGTGTGGCGGTTTAAAAAATCCCAGAAAGGGTTGGTAGGGGTGGATATCACCTCGGCGACCGTCAAGTTGATCGA ACTCGAATCGTCGGGGGCGGGGCATCGCATCGCCAGTTACGCCGTGCGGCCGTTGCACGAGGGGGCGGTCGTGGAGCGGC GCATTCGCGACCTCGATGAAGTCGCCAATACGCTCACGCGAGCGGTGGAACACGCGCGGCCGCACTCCCGTCGTGCGGTG GCGGCGGTGCCGGCCAGCGCCGCCATCACCAAGACGCTGACCTACCCGGCAAGCTTGACCGACGATGAAATCGAGGCGCG GATCCAGCTCGAGTCCGAGCGCCATATCCCGTTTCCGCTCAACGAGGTGGCCTTCGATTTTCAGCGCCTGGGGCTCAACG CCCGCTACCCCGATCAGCAGGACATCCTGCTGGTCGCGTGCCGGCTTCAAGACGTCGACCGCCTGGCCGACGTGTTGCGT CGTGCGGGGCTCGAGCCCGCCGCGGTGGATGTGGAGACCTTCGCCATGGAGCGGGCGGCCGGTGAGTTGCTGCTTGGGCA GGCGGCATCGCAGCCCGACGATGAGTGCGTGGCCCTGGTCGATATCGGCGCCAACATGAATGCGTTCCATGTGCTCATCG ATGGACGCATCGCCTATACCCGCGACAACGTGCTGGGCGGGCGCCACCTGACCGAGGAGATTCGCAAGCGCTACGGCCTG AGCCTCGAGGAAGCGGGGCTGGCCAAGAAGCGCGGCGGCCTGCCCGAGGATTACGAGCTCGAGGTGCTGACGCCGTACAT CGACATGCTGATTCAGCAGGTCGGGCGTTCGCTGCAGCTTTATTATACCTCGGGAAAACCCCGCGACATTCAGCGCCTGG TGCTGGCTGGCGGTTCGAGCGTGATTCCGGGGTTGCGTGAGCGGCTTGCCGCGCAAAGCGGCCTGGAGGTGGTGATGGCC AACCCGTTCAGCCGCATGCGTGTGGCATCGCGCGTCGATGTGCAGGCCCTGGCCAGCGACGCGCCGGCCATGCTCACCGC CTGCGGACTGGCCATGCGAGGGCGGCGATGA
Upstream 100 bases:
>100_bases AGTGTGGCATGCCAACGAAAAGCGGCATGCCCATGCGCCTGGCCGGCGGGGCAGAGAAGGGCGGCGTCGATGACCGCCAC GCCGACAATATTCGCGGGGT
Downstream 100 bases:
>100_bases GCATCGAAATCAACCTGTTGCCGTGGCGGGAGGCGTATCGTCAACGGCGCACTCGACGCTTCTACATGGCACTGGCGATC GTTGCCGTCTCGGCACTGCT
Product: type IV pilus assembly protein PilM
Products: NA
Alternate protein names: Type IV Pilus Biogenesis Protein PilM; Tfp Pilus Assembly Protein ATPase PilM; Type 4 Fimbrial Biogenesis Protein PilM; Fimbrial Assembly Protein PilM; Fimbrial Assembly Membrane Protein; Type Iv Pilus Assembly Protein Pilm; Tfp Pilus Assembly Protein; Tfp Pilus Assembly Protein ATPase PilM-Like Protein; Type IV Pili Biogenesis Protein PilM; Type IV Fimbrial Biogenesis Protein PilM; Type IV Pilus Assembly Protein; Response Regulator Receiver Domain Protein; Response Regulator Receiver Domain-Containing Protein; Type IV Pilus Biogenesis Protein TapM; Type 4 Fimbrial Biogenesis Protein; Pili Assembly Protein; Protein FtsA; Competence Protein PilM; Type IV Pilus Biogenesis ATPase PilM; PilM Type IV Pilus Assembly Protein; Fimbrial Assembly Protein
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MTVWRFKKSQKGLVGVDITSATVKLIELESSGAGHRIASYAVRPLHEGAVVERRIRDLDEVANTLTRAVEHARPHSRRAV AAVPASAAITKTLTYPASLTDDEIEARIQLESERHIPFPLNEVAFDFQRLGLNARYPDQQDILLVACRLQDVDRLADVLR RAGLEPAAVDVETFAMERAAGELLLGQAASQPDDECVALVDIGANMNAFHVLIDGRIAYTRDNVLGGRHLTEEIRKRYGL SLEEAGLAKKRGGLPEDYELEVLTPYIDMLIQQVGRSLQLYYTSGKPRDIQRLVLAGGSSVIPGLRERLAAQSGLEVVMA NPFSRMRVASRVDVQALASDAPAMLTACGLAMRGRR
Sequences:
>Translated_356_residues MTVWRFKKSQKGLVGVDITSATVKLIELESSGAGHRIASYAVRPLHEGAVVERRIRDLDEVANTLTRAVEHARPHSRRAV AAVPASAAITKTLTYPASLTDDEIEARIQLESERHIPFPLNEVAFDFQRLGLNARYPDQQDILLVACRLQDVDRLADVLR RAGLEPAAVDVETFAMERAAGELLLGQAASQPDDECVALVDIGANMNAFHVLIDGRIAYTRDNVLGGRHLTEEIRKRYGL SLEEAGLAKKRGGLPEDYELEVLTPYIDMLIQQVGRSLQLYYTSGKPRDIQRLVLAGGSSVIPGLRERLAAQSGLEVVMA NPFSRMRVASRVDVQALASDAPAMLTACGLAMRGRR >Mature_355_residues TVWRFKKSQKGLVGVDITSATVKLIELESSGAGHRIASYAVRPLHEGAVVERRIRDLDEVANTLTRAVEHARPHSRRAVA AVPASAAITKTLTYPASLTDDEIEARIQLESERHIPFPLNEVAFDFQRLGLNARYPDQQDILLVACRLQDVDRLADVLRR AGLEPAAVDVETFAMERAAGELLLGQAASQPDDECVALVDIGANMNAFHVLIDGRIAYTRDNVLGGRHLTEEIRKRYGLS LEEAGLAKKRGGLPEDYELEVLTPYIDMLIQQVGRSLQLYYTSGKPRDIQRLVLAGGSSVIPGLRERLAAQSGLEVVMAN PFSRMRVASRVDVQALASDAPAMLTACGLAMRGRR
Specific function: Unknown
COG id: COG4972
COG function: function code NU; Tfp pilus assembly protein, ATPase PilM
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39054; Mature: 38923
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: PS01036 HSP70_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVWRFKKSQKGLVGVDITSATVKLIELESSGAGHRIASYAVRPLHEGAVVERRIRDLDE CCEEECCCCCCCEEEEEECCEEEEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHH VANTLTRAVEHARPHSRRAVAAVPASAAITKTLTYPASLTDDEIEARIQLESERHIPFPL HHHHHHHHHHHCCCCCCCEEEECCCHHHHHHEEECCCCCCCCCEEEEEEECCCCCCCCCH NEVAFDFQRLGLNARYPDQQDILLVACRLQDVDRLADVLRRAGLEPAAVDVETFAMERAA HHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH GELLLGQAASQPDDECVALVDIGANMNAFHVLIDGRIAYTRDNVLGGRHLTEEIRKRYGL HHHHCCCCCCCCCCCEEEEEEECCCCCEEEEEEECEEEEECCCCCCCHHHHHHHHHHHCC SLEEAGLAKKRGGLPEDYELEVLTPYIDMLIQQVGRSLQLYYTSGKPRDIQRLVLAGGSS CHHHHCCHHHCCCCCCCCEEEEECHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCC VIPGLRERLAAQSGLEVVMANPFSRMRVASRVDVQALASDAPAMLTACGLAMRGRR CCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC >Mature Secondary Structure TVWRFKKSQKGLVGVDITSATVKLIELESSGAGHRIASYAVRPLHEGAVVERRIRDLDE CEEECCCCCCCEEEEEECCEEEEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHH VANTLTRAVEHARPHSRRAVAAVPASAAITKTLTYPASLTDDEIEARIQLESERHIPFPL HHHHHHHHHHHCCCCCCCEEEECCCHHHHHHEEECCCCCCCCCEEEEEEECCCCCCCCCH NEVAFDFQRLGLNARYPDQQDILLVACRLQDVDRLADVLRRAGLEPAAVDVETFAMERAA HHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH GELLLGQAASQPDDECVALVDIGANMNAFHVLIDGRIAYTRDNVLGGRHLTEEIRKRYGL HHHHCCCCCCCCCCCEEEEEEECCCCCEEEEEEECEEEEECCCCCCCHHHHHHHHHHHCC SLEEAGLAKKRGGLPEDYELEVLTPYIDMLIQQVGRSLQLYYTSGKPRDIQRLVLAGGSS CHHHHCCHHHCCCCCCCCEEEEECHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCC VIPGLRERLAAQSGLEVVMANPFSRMRVASRVDVQALASDAPAMLTACGLAMRGRR CCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA