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The map label for this gene is yaaD [H]

Identifier: 92112616

GI number: 92112616

Start: 533338

End: 533781

Strand: Direct

Name: yaaD [H]

Synonym: Csal_0483

Alternate gene names: 92112616

Gene position: 533338-533781 (Clockwise)

Preceding gene: 92112615

Following gene: 92112617

Centisome position: 14.43

GC content: 62.39

Gene sequence:

>444_bases
ATGAGTGACTACCGTATCGACGACGGGATGGAAGTGACCCTGCATTTCACCGTCAAGCTGGAAGATGACACGGTGATCGA
TTCCACCCGCGAGAAAGAGGCCGCGACGTTCCAGGTTGGCGACGGCAATCTGCCGCCGGGCTTCGAGGCACCGCTCAAGG
GGATGACCGGGGGCGAGAGCGGTCGTTTCACCATCACGCCGGAGCACGGCTTCGGTCAGCACAATCCCCAGAACGTGCAG
CGTCTGCCGCGCGACCAGTTCGAGGACGAACTCGAGGTGGGGACGGTGATGTCCTTCACCGATCCCGGGGGTGGCGAATT
GCCCGGCGTGATCGCCGACATCGACGAGCGTCATGTCGATGTGGACTTCAATCACCCGCTGGCGGGGCGTACCCTGATCT
TCGAGGTGGAAGTGATCGATGTCCGCCCGGCCACGACCCATTAA

Upstream 100 bases:

>100_bases
TTTAACTTGGCGGACACCGCCATCACCTTGGGGGCCATGGGCCTGATTCTGGCATCCCTGCGCGATGACCGGCGAAACAC
GACGCAAAAAGAGACGCCTC

Downstream 100 bases:

>100_bases
GCTTTGACGGGCGTCCGTCGCCCATCGACACGATGCCGCCGTGCATCGAGGCAAGGTAAGCATGCAAATCAAGCTGGCCA
ATCCACGCGGTTTCTGCGCT

Product: FKBP-type peptidylprolyl isomerase

Products: NA

Alternate protein names: PPIase; Rotamase [H]

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MSDYRIDDGMEVTLHFTVKLEDDTVIDSTREKEAATFQVGDGNLPPGFEAPLKGMTGGESGRFTITPEHGFGQHNPQNVQ
RLPRDQFEDELEVGTVMSFTDPGGGELPGVIADIDERHVDVDFNHPLAGRTLIFEVEVIDVRPATTH

Sequences:

>Translated_147_residues
MSDYRIDDGMEVTLHFTVKLEDDTVIDSTREKEAATFQVGDGNLPPGFEAPLKGMTGGESGRFTITPEHGFGQHNPQNVQ
RLPRDQFEDELEVGTVMSFTDPGGGELPGVIADIDERHVDVDFNHPLAGRTLIFEVEVIDVRPATTH
>Mature_146_residues
SDYRIDDGMEVTLHFTVKLEDDTVIDSTREKEAATFQVGDGNLPPGFEAPLKGMTGGESGRFTITPEHGFGQHNPQNVQR
LPRDQFEDELEVGTVMSFTDPGGGELPGVIADIDERHVDVDFNHPLAGRTLIFEVEVIDVRPATTH

Specific function: PPIases accelerate the folding of proteins [H]

COG id: COG1047

COG function: function code O; FKBP-type peptidyl-prolyl cis-trans isomerases 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PPIase FKBP-type domain [H]

Homologues:

Organism=Escherichia coli, GI1786211, Length=136, Percent_Identity=42.6470588235294, Blast_Score=109, Evalue=8e-26,
Organism=Escherichia coli, GI1789748, Length=144, Percent_Identity=34.0277777777778, Blast_Score=75, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001179 [H]

Pfam domain/function: PF00254 FKBP_C [H]

EC number: =5.2.1.8 [H]

Molecular weight: Translated: 16191; Mature: 16060

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: PS50059 FKBP_PPIASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDYRIDDGMEVTLHFTVKLEDDTVIDSTREKEAATFQVGDGNLPPGFEAPLKGMTGGES
CCCCCCCCCCEEEEEEEEEECCCCEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
GRFTITPEHGFGQHNPQNVQRLPRDQFEDELEVGTVMSFTDPGGGELPGVIADIDERHVD
CEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCEEE
VDFNHPLAGRTLIFEVEVIDVRPATTH
EECCCCCCCCEEEEEEEEEEECCCCCC
>Mature Secondary Structure 
SDYRIDDGMEVTLHFTVKLEDDTVIDSTREKEAATFQVGDGNLPPGFEAPLKGMTGGES
CCCCCCCCCEEEEEEEEEECCCCEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
GRFTITPEHGFGQHNPQNVQRLPRDQFEDELEVGTVMSFTDPGGGELPGVIADIDERHVD
CEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCEEE
VDFNHPLAGRTLIFEVEVIDVRPATTH
EECCCCCCCCEEEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2121716 [H]