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The map label for this gene is yfcH [H]

Identifier: 92112601

GI number: 92112601

Start: 516143

End: 517039

Strand: Direct

Name: yfcH [H]

Synonym: Csal_0468

Alternate gene names: 92112601

Gene position: 516143-517039 (Clockwise)

Preceding gene: 92112591

Following gene: 92112604

Centisome position: 13.96

GC content: 68.78

Gene sequence:

>897_bases
ATGCGCATCTTGATCACGGGCGGCAGCGGCTTCGTCGGGCGCCCGCTGTGCCGACGCCTTCACGACGCCGGCCACGAGCT
GCTGGTGGTGTCGCGCTCACCGTCGCGCGCGAAGGCGCTGCTTCCCGACGGGACCGAGGTCCGCGATTCGGTATTGGCGT
TCGTGGACCGTGCGCCGGAGGCGATCATCAACCTCGCGGGCGAGCCCATTGCCGACAAGCGCTGGAGCGCTGCGCAAAAG
CGTCGCCTGATCGACTCGCGCTTGACCGTCACGCGTGATCTGGTGACCTTGTGCGAGCGTCTGGACACGCCGCCGCGAGT
GATGATCTCCGGTTCGGCGATGGGGTATTACGGGGACCAGGGCGATCGCGACGTGACCGAGCAGACGCCGCCTCAGGAGG
AGTTCGCGCACCGTCTTTGCGCCGAGTGGGAGTCGGCGGCACTGGCGGCCGAGCCGCTGGGGGTGAGAGTGGTACTGCTG
CGTACCGGGCTGGTGCTGGATGCCGGTGGCGGTACCCTGGCCAAGTTGCTGTTGCCGTTTCGTCTCGGGCTGGGCGGACG
GCTGGGCAGCGGACGCCAGTACATGCCGTGGATCCACCGCGAGGATTGGGTGAGCATCGCGCTCTTCCTGCTCGAGCGCG
ACGACCTCGCAGGACCGTTCAATGCCTCGGCGCCCCATCCGGTGACCAATGCCGATTTCACCCGTGCCTTGGCGCGCCAC
CTGCATCGTCCCGCGGTGATGGCGGTGCCCGCCGGGGTCCTGCGGCTGGCCCTGGGAGAGATGTCGCGCTTGCTGCTGAC
CGGGGCACGCATGCGCCCCGCACGCCTGGAGGCGGCGGGGTTCGGGTTTCAATATCCGACGCTGGACAGCGCCCTGAAGG
CGATTCTCGGCCGCTGA

Upstream 100 bases:

>100_bases
TGGCCATGAGCTATGCTTTTCAACCGGGCCGTCGCGTGCTTACCTGGACAACTCTACCAAATTGTACAACGGTCGTATAA
TACGTATTCGGAGAGTCAAT

Downstream 100 bases:

>100_bases
CGCGAGGCGTCGCGGCGCCCTTCATTCAGGCGGGTCGACGGTCACCACCACGCGGACCGCGTCGAGGCGCAGGCGTGTGG
CGTCGATGGCCGTGTCCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MRILITGGSGFVGRPLCRRLHDAGHELLVVSRSPSRAKALLPDGTEVRDSVLAFVDRAPEAIINLAGEPIADKRWSAAQK
RRLIDSRLTVTRDLVTLCERLDTPPRVMISGSAMGYYGDQGDRDVTEQTPPQEEFAHRLCAEWESAALAAEPLGVRVVLL
RTGLVLDAGGGTLAKLLLPFRLGLGGRLGSGRQYMPWIHREDWVSIALFLLERDDLAGPFNASAPHPVTNADFTRALARH
LHRPAVMAVPAGVLRLALGEMSRLLLTGARMRPARLEAAGFGFQYPTLDSALKAILGR

Sequences:

>Translated_298_residues
MRILITGGSGFVGRPLCRRLHDAGHELLVVSRSPSRAKALLPDGTEVRDSVLAFVDRAPEAIINLAGEPIADKRWSAAQK
RRLIDSRLTVTRDLVTLCERLDTPPRVMISGSAMGYYGDQGDRDVTEQTPPQEEFAHRLCAEWESAALAAEPLGVRVVLL
RTGLVLDAGGGTLAKLLLPFRLGLGGRLGSGRQYMPWIHREDWVSIALFLLERDDLAGPFNASAPHPVTNADFTRALARH
LHRPAVMAVPAGVLRLALGEMSRLLLTGARMRPARLEAAGFGFQYPTLDSALKAILGR
>Mature_298_residues
MRILITGGSGFVGRPLCRRLHDAGHELLVVSRSPSRAKALLPDGTEVRDSVLAFVDRAPEAIINLAGEPIADKRWSAAQK
RRLIDSRLTVTRDLVTLCERLDTPPRVMISGSAMGYYGDQGDRDVTEQTPPQEEFAHRLCAEWESAALAAEPLGVRVVLL
RTGLVLDAGGGTLAKLLLPFRLGLGGRLGSGRQYMPWIHREDWVSIALFLLERDDLAGPFNASAPHPVTNADFTRALARH
LHRPAVMAVPAGVLRLALGEMSRLLLTGARMRPARLEAAGFGFQYPTLDSALKAILGR

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=301, Percent_Identity=35.5481727574751, Blast_Score=175, Evalue=6e-44,
Organism=Escherichia coli, GI1788642, Length=297, Percent_Identity=51.5151515151515, Blast_Score=290, Evalue=1e-79,
Organism=Drosophila melanogaster, GI28573846, Length=295, Percent_Identity=32.8813559322034, Blast_Score=172, Evalue=2e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 32445; Mature: 32445

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILITGGSGFVGRPLCRRLHDAGHELLVVSRSPSRAKALLPDGTEVRDSVLAFVDRAPE
CEEEEECCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCEECCCCHHHHHHHHHHHHHCHH
AIINLAGEPIADKRWSAAQKRRLIDSRLTVTRDLVTLCERLDTPPRVMISGSAMGYYGDQ
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC
GDRDVTEQTPPQEEFAHRLCAEWESAALAAEPLGVRVVLLRTGLVLDAGGGTLAKLLLPF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEECCCHHHHHHHHHH
RLGLGGRLGSGRQYMPWIHREDWVSIALFLLERDDLAGPFNASAPHPVTNADFTRALARH
HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
LHRPAVMAVPAGVLRLALGEMSRLLLTGARMRPARLEAAGFGFQYPTLDSALKAILGR
HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MRILITGGSGFVGRPLCRRLHDAGHELLVVSRSPSRAKALLPDGTEVRDSVLAFVDRAPE
CEEEEECCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCEECCCCHHHHHHHHHHHHHCHH
AIINLAGEPIADKRWSAAQKRRLIDSRLTVTRDLVTLCERLDTPPRVMISGSAMGYYGDQ
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC
GDRDVTEQTPPQEEFAHRLCAEWESAALAAEPLGVRVVLLRTGLVLDAGGGTLAKLLLPF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEECCCHHHHHHHHHH
RLGLGGRLGSGRQYMPWIHREDWVSIALFLLERDDLAGPFNASAPHPVTNADFTRALARH
HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
LHRPAVMAVPAGVLRLALGEMSRLLLTGARMRPARLEAAGFGFQYPTLDSALKAILGR
HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]