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The map label for this gene is fucU [C]

Identifier: 92112500

GI number: 92112500

Start: 411780

End: 412214

Strand: Direct

Name: fucU [C]

Synonym: Csal_0367

Alternate gene names: 92112500

Gene position: 411780-412214 (Clockwise)

Preceding gene: 92112499

Following gene: 92112501

Centisome position: 11.14

GC content: 67.36

Gene sequence:

>435_bases
ATGATCAACGGACCGCTGCTGCATCCGCCTCTTTTGCATGCTCTCGCCGCCGCGGGGCACGGCGCCAAGATACTCGTCGC
CGATGCGCTCTACCCGCACTCCACGGGGGCGCCGGCTACCGCTTCCCGAGTGTATCTCAATCTCTGCGAGGGGATGGTGC
CCGCCCAGGCGGTGATGGATGCGGTGTCGCAGTCCGTCGCCGTGGAGGCCATCACCTTCATGGCCACGGCCGAAGGCAAG
GCCTCGGAGACCGTCGTCGATTGCCAGCAACGCCTGGCCGGGCATCGCCACGGCAACGGCCAGACGATCGCCTGGTCTGG
GCTCGAGCGTTGGGCATTCTACGACGCCTGCCGTGCGCCGGACGTGTGCTTGCTGATCGCCACCGGCGAGCGCCGCCCCT
ACTCCAACTTCCTGCTGACGATAGGCGTGCCCTGA

Upstream 100 bases:

>100_bases
CTCGCCCAGGATATGCGGCAGAGATCAAGGCCGAGACGCTGGCCGCCTGGGCATGGCCGGACGGTACTGAGTGGGTCAAG
CGTCGACAGGTGATGACGGC

Downstream 100 bases:

>100_bases
TGATCGATACCCATCTCCATGTCTGGGATACCGCCGCGGTGCGAATCCCCTGGTTGAACGATGCGGGTCTGCCCGCCAAG
GCGGTGATTCCCGACCGCCA

Product: RbsD or FucU transport

Products: NA

Alternate protein names: Fuscose Operon Protein FucU

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MINGPLLHPPLLHALAAAGHGAKILVADALYPHSTGAPATASRVYLNLCEGMVPAQAVMDAVSQSVAVEAITFMATAEGK
ASETVVDCQQRLAGHRHGNGQTIAWSGLERWAFYDACRAPDVCLLIATGERRPYSNFLLTIGVP

Sequences:

>Translated_144_residues
MINGPLLHPPLLHALAAAGHGAKILVADALYPHSTGAPATASRVYLNLCEGMVPAQAVMDAVSQSVAVEAITFMATAEGK
ASETVVDCQQRLAGHRHGNGQTIAWSGLERWAFYDACRAPDVCLLIATGERRPYSNFLLTIGVP
>Mature_144_residues
MINGPLLHPPLLHALAAAGHGAKILVADALYPHSTGAPATASRVYLNLCEGMVPAQAVMDAVSQSVAVEAITFMATAEGK
ASETVVDCQQRLAGHRHGNGQTIAWSGLERWAFYDACRAPDVCLLIATGERRPYSNFLLTIGVP

Specific function: Unknown

COG id: COG4154

COG function: function code G; Fucose dissimilation pathway protein FucU

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15192; Mature: 15192

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINGPLLHPPLLHALAAAGHGAKILVADALYPHSTGAPATASRVYLNLCEGMVPAQAVMD
CCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHH
AVSQSVAVEAITFMATAEGKASETVVDCQQRLAGHRHGNGQTIAWSGLERWAFYDACRAP
HHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHCCCC
DVCLLIATGERRPYSNFLLTIGVP
CEEEEEEECCCCCCCCEEEEEECC
>Mature Secondary Structure
MINGPLLHPPLLHALAAAGHGAKILVADALYPHSTGAPATASRVYLNLCEGMVPAQAVMD
CCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHH
AVSQSVAVEAITFMATAEGKASETVVDCQQRLAGHRHGNGQTIAWSGLERWAFYDACRAP
HHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHCCCC
DVCLLIATGERRPYSNFLLTIGVP
CEEEEEEECCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA