| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is catJ [H]
Identifier: 92112434
GI number: 92112434
Start: 339037
End: 339813
Strand: Direct
Name: catJ [H]
Synonym: Csal_0300
Alternate gene names: 92112434
Gene position: 339037-339813 (Clockwise)
Preceding gene: 92112433
Following gene: 92112435
Centisome position: 9.17
GC content: 64.22
Gene sequence:
>777_bases ATGAGTATCGAGTACACCTCCGCGGAAATGATGACCGTGACGGCGGCGAAGGCGCTGGAGAACGGCATGACGTGTTTCGT GGGCATCGGCTTGCCGTCCGAGGCCGCCAACCTGGCGCGCCTGACGCATGCACCGGACGTGGTACTGATCTACGAGTCCG GCACCCTGCAGACCAAGCCGGACGTGCTGCCGCTTTCCATCGGCGACGGCGAACTTTGCGAGTCGGCGCTGACCACCGTG TCGGTGCCGGAAATGTTCCGCTACTGGCTGCAGGGCGGCAAGATCGATGTGGGCTTTCTGGGCACCGCGCAGATCGATCG CTACTGCAACCTCAACACCACGCTGATCGGCGATTATCAGGCGCCCAAGGTGCGCTTGCCCGGCGGTGGCGGGGCACCGG AAATCGCGACCTGTGCCGGCGAGGTCTTCATCACGCTCAAGCATTCCAAGCGGACCTTCGTCGATCAGGTGGATTTCATC ACTACCCTCGGCTTCGGCCGCGACGGCAAGGCGCGTGACGGGGTGCCCAATATCGGCCGTGGTCCGACTCGGGTGATCAC CGACCTGTGCGTGATGAAGCCCGACCCCGAGACTCGCGAGCTGGTGGTGGTATCGCTGCATCCGGGCGTGACCGTCGAGC AGGTGCAGGACGCGACCGGCTGGGAGATTCGTTTCGCCGAGCAGCTCGACACTACGCCGATGCCTTCCGCGAATGAGCTC GACGTGCTGCGGGATCTCAAGGCGCGTACCGAACGCAAACATGCCGGCGAGGCATGA
Upstream 100 bases:
>100_bases ACAACCGCTTCTACAAGGAGTGGGATACCATCGCGCGCGACCGTGACACCTTCCAGACATGGCTCGACGAGAACGTCTTC AACGCAGGGGGGCAGGCCCA
Downstream 100 bases:
>100_bases GGAGAATTCGATGAGCGATGTTTGGTTGTGTCACCCCACGCGTTCCGCCGTGGGACGTTTCGGCGGCTCGCTGGCCAGCG TCCGCCCCGACGACCTGGCG
Product: coenzyme A transferase
Products: NA
Alternate protein names: 3-oxoadipate:succinyl-CoA transferase subunit B; Beta-ketoadipate:succinyl-CoA transferase subunit B [H]
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MSIEYTSAEMMTVTAAKALENGMTCFVGIGLPSEAANLARLTHAPDVVLIYESGTLQTKPDVLPLSIGDGELCESALTTV SVPEMFRYWLQGGKIDVGFLGTAQIDRYCNLNTTLIGDYQAPKVRLPGGGGAPEIATCAGEVFITLKHSKRTFVDQVDFI TTLGFGRDGKARDGVPNIGRGPTRVITDLCVMKPDPETRELVVVSLHPGVTVEQVQDATGWEIRFAEQLDTTPMPSANEL DVLRDLKARTERKHAGEA
Sequences:
>Translated_258_residues MSIEYTSAEMMTVTAAKALENGMTCFVGIGLPSEAANLARLTHAPDVVLIYESGTLQTKPDVLPLSIGDGELCESALTTV SVPEMFRYWLQGGKIDVGFLGTAQIDRYCNLNTTLIGDYQAPKVRLPGGGGAPEIATCAGEVFITLKHSKRTFVDQVDFI TTLGFGRDGKARDGVPNIGRGPTRVITDLCVMKPDPETRELVVVSLHPGVTVEQVQDATGWEIRFAEQLDTTPMPSANEL DVLRDLKARTERKHAGEA >Mature_257_residues SIEYTSAEMMTVTAAKALENGMTCFVGIGLPSEAANLARLTHAPDVVLIYESGTLQTKPDVLPLSIGDGELCESALTTVS VPEMFRYWLQGGKIDVGFLGTAQIDRYCNLNTTLIGDYQAPKVRLPGGGGAPEIATCAGEVFITLKHSKRTFVDQVDFIT TLGFGRDGKARDGVPNIGRGPTRVITDLCVMKPDPETRELVVVSLHPGVTVEQVQDATGWEIRFAEQLDTTPMPSANELD VLRDLKARTERKHAGEA
Specific function: Unknown
COG id: COG2057
COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 3-oxoacid CoA-transferase subunit B family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004165 [H]
Pfam domain/function: PF01144 CoA_trans [H]
EC number: =2.8.3.6 [H]
Molecular weight: Translated: 27852; Mature: 27721
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIEYTSAEMMTVTAAKALENGMTCFVGIGLPSEAANLARLTHAPDVVLIYESGTLQTKP CCCEECCCCEEHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCEEEEECCCCCCCCC DVLPLSIGDGELCESALTTVSVPEMFRYWLQGGKIDVGFLGTAQIDRYCNLNTTLIGDYQ CEEEEECCCHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECHHHHHHCCCCCEEEEECCC APKVRLPGGGGAPEIATCAGEVFITLKHSKRTFVDQVDFITTLGFGRDGKARDGVPNIGR CCEEECCCCCCCCHHHEECCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC GPTRVITDLCVMKPDPETRELVVVSLHPGVTVEQVQDATGWEIRFAEQLDTTPMPSANEL CHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHCCCCCCEEEEHHHCCCCCCCCCCHH DVLRDLKARTERKHAGEA HHHHHHHHHHHHHHCCCC >Mature Secondary Structure SIEYTSAEMMTVTAAKALENGMTCFVGIGLPSEAANLARLTHAPDVVLIYESGTLQTKP CCEECCCCEEHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCEEEEECCCCCCCCC DVLPLSIGDGELCESALTTVSVPEMFRYWLQGGKIDVGFLGTAQIDRYCNLNTTLIGDYQ CEEEEECCCHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECHHHHHHCCCCCEEEEECCC APKVRLPGGGGAPEIATCAGEVFITLKHSKRTFVDQVDFITTLGFGRDGKARDGVPNIGR CCEEECCCCCCCCHHHEECCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC GPTRVITDLCVMKPDPETRELVVVSLHPGVTVEQVQDATGWEIRFAEQLDTTPMPSANEL CHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHCCCCCCEEEEHHHCCCCCCCCCCHH DVLRDLKARTERKHAGEA HHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11741863 [H]