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The map label for this gene is 92112413

Identifier: 92112413

GI number: 92112413

Start: 316750

End: 317247

Strand: Direct

Name: 92112413

Synonym: Csal_0279

Alternate gene names: NA

Gene position: 316750-317247 (Clockwise)

Preceding gene: 92112399

Following gene: 92112419

Centisome position: 8.57

GC content: 67.67

Gene sequence:

>498_bases
ATGACCAAAGTGGAATCACAGGCCTCCGCCGAGTCGCGGCACGGCGACGCCGACGACGCCCCCGAGGCGGTGCGCGTCGC
GTATTTGATCGGCCGGCTCGACCGCGCCCTGCGCCGCCATATCAGCGAGGCCGTGCAGCCCCTGGGCGTGACCATGCAGC
AGTACACGGCGCTTTCCGTGCTGGCACGACGCAGCCCCCAGTCCAATTCGCAACTGGCCGAGAAGTCGCTGGTGTCGCCG
CAGGCGGCCAACGAGATGGTCAAGGCCATGGAGACCAAGGGGCTCGTCGAGCGTCGCCCCGACCCGCACCATGGACGCAT
CATCCAGATCCGCATGACCGAGGCCGGACGACGCACGCTGGCCGAGTGCGATCGCACGGTCATGGCGCTCGAGGGCCGCA
TGCTGGAGAGCCTGAGCGAGGCGCAGCGGGGAGCGTTTCAGCGTCATCTCAAATCCTCCCTCAAGTCACTGGGCGCGGGA
CTGGTGGATACCGACTGA

Upstream 100 bases:

>100_bases
ATCGCTCATGTCAATTTCCTGTCAAAATAGTATCAAGTAAGTTGATATTTACCCTGCCAATCATAGTGCGCTATCCTGCG
TTTGCAAAGAGGAAACGCTT

Downstream 100 bases:

>100_bases
GTGAGCGTGCTAGGCGACGCGAGCGCCGGACCTGGCATCCTCCTCAGCGTGTATAGCGCTCGACGAGTCGTGTGGCATCG
TCGTACAGCATCTGCCCGTC

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MTKVESQASAESRHGDADDAPEAVRVAYLIGRLDRALRRHISEAVQPLGVTMQQYTALSVLARRSPQSNSQLAEKSLVSP
QAANEMVKAMETKGLVERRPDPHHGRIIQIRMTEAGRRTLAECDRTVMALEGRMLESLSEAQRGAFQRHLKSSLKSLGAG
LVDTD

Sequences:

>Translated_165_residues
MTKVESQASAESRHGDADDAPEAVRVAYLIGRLDRALRRHISEAVQPLGVTMQQYTALSVLARRSPQSNSQLAEKSLVSP
QAANEMVKAMETKGLVERRPDPHHGRIIQIRMTEAGRRTLAECDRTVMALEGRMLESLSEAQRGAFQRHLKSSLKSLGAG
LVDTD
>Mature_164_residues
TKVESQASAESRHGDADDAPEAVRVAYLIGRLDRALRRHISEAVQPLGVTMQQYTALSVLARRSPQSNSQLAEKSLVSPQ
AANEMVKAMETKGLVERRPDPHHGRIIQIRMTEAGRRTLAECDRTVMALEGRMLESLSEAQRGAFQRHLKSSLKSLGAGL
VDTD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 18158; Mature: 18027

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKVESQASAESRHGDADDAPEAVRVAYLIGRLDRALRRHISEAVQPLGVTMQQYTALSV
CCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LARRSPQSNSQLAEKSLVSPQAANEMVKAMETKGLVERRPDPHHGRIIQIRMTEAGRRTL
HHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHH
AECDRTVMALEGRMLESLSEAQRGAFQRHLKSSLKSLGAGLVDTD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TKVESQASAESRHGDADDAPEAVRVAYLIGRLDRALRRHISEAVQPLGVTMQQYTALSV
CCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LARRSPQSNSQLAEKSLVSPQAANEMVKAMETKGLVERRPDPHHGRIIQIRMTEAGRRTL
HHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHH
AECDRTVMALEGRMLESLSEAQRGAFQRHLKSSLKSLGAGLVDTD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]