Click here to switch to the map view.

The map label for this gene is yjjJ [C]

Identifier: 92112361

GI number: 92112361

Start: 256873

End: 258120

Strand: Direct

Name: yjjJ [C]

Synonym: Csal_0226

Alternate gene names: 92112361

Gene position: 256873-258120 (Clockwise)

Preceding gene: 92112360

Following gene: 92112362

Centisome position: 6.95

GC content: 61.94

Gene sequence:

>1248_bases
ATGACTGAGTTCGAAGTACATATCGACCTCGGTGGGAGCACCTTTCCAGTCGGTCTGGCCAGGTGCAATCGCGTGCGTGG
CACGGAGAGGATTCTTTTCGAATACGACGCCGAATGGCTCGCGTCGCCGGATCGCTTCTCACTGGAGCCTGCCCTTGCAC
TCACGCGGGGAGCCTTCGCTCCACCTGCAGGGATGACCAGCTTCGGCTCGATTGGCGACTCGGCGCCCGACACCTGGGGC
CGTCGTCTGATGCAACGTGCCGAGCGGCGGCGTGCCGCGCGGGAGGGTCGCAGTGTTCGAACGCTTGCCGAGAGCGATTA
CCTGCTGGGAGTGTCTGATGAGACTCGGCTTGGTGCCCTGCGTTTTCGCCGAGTGGGCGAGACGTCATTTCAGGCGCCGA
TTCAGGCTGGCGTTCCTGCCCTCGTCGAGCTGGGTCGACTGCTTCAGGTCACAGAGCGTGTCTTGCGTGACGAGGAAACG
GATGAAGACCTCCAGCTCATCTTTGCCCCGGGCTCGTCCCTGGGTGGGGCCCGCCCGAAAGCCTCGGTCATCGATCAGTA
CGGCCACCTCGCGATCGCCAAGTTCCCGAAGGATACCGACGAGTACAGTGTGGAGACCTGGGAAGAAATCGCGCTCCGCT
TGGCCAACCAGGCTGGCATCGTGACGCCGCAGCACGAACTGGTCGACGTGGGCGGTCGGGCCGTCATGCTGTCGAGACGA
TTCGATCGAGATGGCACTATCCGCATTCCGTTTCTTTCCGCGATGGCAATGATGGGCGCCAGGGATGGCGAACCTGGCAG
CTATCCCGAAATGGTCGATGCTCTGACCGCGCATGGCGCTCAAGGAAAGACCGACGCGCACGCACTGTATCGGCGCGTCG
TCTTCAGCGTGATGATCTCCAATGTCGACGATCATCTGCGCAATCACGGCTTTCTGTGGTTGGGGAACGCTGGATGGTCA
CTCGCTCCGGCCTATGACCTCAACCCGGTGCCCAGTGACCTCAAGGCGCGGGTGTTAACCACGAACATCGATCTCGACGA
GAGCACCTGCTCGGTCGATCTGCTGGAGGCGGCATCCGGTTATTTTGGGCTCACGCTGGCCAACGCCCGGCGAATCATCA
AGGACGTTGCGTCAGTAACCGCAACCTGGCGGAACACTGCCAGGGCCGTTGGCGCACGTCCGGCCGAGATCGAGCGTATG
GCCAGCGCCTTCGAGCATGATGACTTACAGCATGGGCTGGCGTTGTAA

Upstream 100 bases:

>100_bases
GATATTGCCGACATTGGCAATGACAGCGTTGGCCAGGCGCTTGCCAGTGCCGAGCTGCCCAAGCGAGTCGGATCGAAACG
CTTACCGAGGTCTTCGCACA

Downstream 100 bases:

>100_bases
AGCCAGTGTCTTAAACCCTGATAGGTGTTCACTGCAAAAGCTATTCTGGCTTTGGTTGTTTATATGGCACGACGATAAAA
ACGAAATCCATTTGTAGGAG

Product: HipA-like protein

Products: NA

Alternate protein names: HipA Domain Protein; Xin-Antitoxin System Toxin Component HipA Family; HipA Protein; Amidophosphoribosyl Transferase; HipA-Like C-Terminal Domain-Containing; HipA-Like; HipA-Like Protein; HipA Family Protein; Hipa Domain Protein; Hipa Protein; Protein Related Capsule Biosynthesis -Like; Protein Containing HipA-Like C-Terminal Domain; Phage-Related Protein; Transcriptional Regulator; Conserved Protein; Capsule Biosynthesis Protein HipA; Capsule Biosynthesis -Like Protein; Orf_Bo

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MTEFEVHIDLGGSTFPVGLARCNRVRGTERILFEYDAEWLASPDRFSLEPALALTRGAFAPPAGMTSFGSIGDSAPDTWG
RRLMQRAERRRAAREGRSVRTLAESDYLLGVSDETRLGALRFRRVGETSFQAPIQAGVPALVELGRLLQVTERVLRDEET
DEDLQLIFAPGSSLGGARPKASVIDQYGHLAIAKFPKDTDEYSVETWEEIALRLANQAGIVTPQHELVDVGGRAVMLSRR
FDRDGTIRIPFLSAMAMMGARDGEPGSYPEMVDALTAHGAQGKTDAHALYRRVVFSVMISNVDDHLRNHGFLWLGNAGWS
LAPAYDLNPVPSDLKARVLTTNIDLDESTCSVDLLEAASGYFGLTLANARRIIKDVASVTATWRNTARAVGARPAEIERM
ASAFEHDDLQHGLAL

Sequences:

>Translated_415_residues
MTEFEVHIDLGGSTFPVGLARCNRVRGTERILFEYDAEWLASPDRFSLEPALALTRGAFAPPAGMTSFGSIGDSAPDTWG
RRLMQRAERRRAAREGRSVRTLAESDYLLGVSDETRLGALRFRRVGETSFQAPIQAGVPALVELGRLLQVTERVLRDEET
DEDLQLIFAPGSSLGGARPKASVIDQYGHLAIAKFPKDTDEYSVETWEEIALRLANQAGIVTPQHELVDVGGRAVMLSRR
FDRDGTIRIPFLSAMAMMGARDGEPGSYPEMVDALTAHGAQGKTDAHALYRRVVFSVMISNVDDHLRNHGFLWLGNAGWS
LAPAYDLNPVPSDLKARVLTTNIDLDESTCSVDLLEAASGYFGLTLANARRIIKDVASVTATWRNTARAVGARPAEIERM
ASAFEHDDLQHGLAL
>Mature_414_residues
TEFEVHIDLGGSTFPVGLARCNRVRGTERILFEYDAEWLASPDRFSLEPALALTRGAFAPPAGMTSFGSIGDSAPDTWGR
RLMQRAERRRAAREGRSVRTLAESDYLLGVSDETRLGALRFRRVGETSFQAPIQAGVPALVELGRLLQVTERVLRDEETD
EDLQLIFAPGSSLGGARPKASVIDQYGHLAIAKFPKDTDEYSVETWEEIALRLANQAGIVTPQHELVDVGGRAVMLSRRF
DRDGTIRIPFLSAMAMMGARDGEPGSYPEMVDALTAHGAQGKTDAHALYRRVVFSVMISNVDDHLRNHGFLWLGNAGWSL
APAYDLNPVPSDLKARVLTTNIDLDESTCSVDLLEAASGYFGLTLANARRIIKDVASVTATWRNTARAVGARPAEIERMA
SAFEHDDLQHGLAL

Specific function: Unknown

COG id: COG3550

COG function: function code R; Uncharacterized protein related to capsule biosynthesis enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45450; Mature: 45319

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEFEVHIDLGGSTFPVGLARCNRVRGTERILFEYDAEWLASPDRFSLEPALALTRGAFA
CCEEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECHHHHCCCCCCCCCHHHHHHCCCCC
PPAGMTSFGSIGDSAPDTWGRRLMQRAERRRAAREGRSVRTLAESDYLLGVSDETRLGAL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEECCCCCHHHHH
RFRRVGETSFQAPIQAGVPALVELGRLLQVTERVLRDEETDEDLQLIFAPGSSLGGARPK
HHHHCCCCHHCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCC
ASVIDQYGHLAIAKFPKDTDEYSVETWEEIALRLANQAGIVTPQHELVDVGGRAVMLSRR
HHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCEEEEEEC
FDRDGTIRIPFLSAMAMMGARDGEPGSYPEMVDALTAHGAQGKTDAHALYRRVVFSVMIS
CCCCCEEEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
NVDDHLRNHGFLWLGNAGWSLAPAYDLNPVPSDLKARVLTTNIDLDESTCSVDLLEAASG
HHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHCCC
YFGLTLANARRIIKDVASVTATWRNTARAVGARPAEIERMASAFEHDDLQHGLAL
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TEFEVHIDLGGSTFPVGLARCNRVRGTERILFEYDAEWLASPDRFSLEPALALTRGAFA
CEEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECHHHHCCCCCCCCCHHHHHHCCCCC
PPAGMTSFGSIGDSAPDTWGRRLMQRAERRRAAREGRSVRTLAESDYLLGVSDETRLGAL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEECCCCCHHHHH
RFRRVGETSFQAPIQAGVPALVELGRLLQVTERVLRDEETDEDLQLIFAPGSSLGGARPK
HHHHCCCCHHCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCC
ASVIDQYGHLAIAKFPKDTDEYSVETWEEIALRLANQAGIVTPQHELVDVGGRAVMLSRR
HHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCEEEEEEC
FDRDGTIRIPFLSAMAMMGARDGEPGSYPEMVDALTAHGAQGKTDAHALYRRVVFSVMIS
CCCCCEEEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
NVDDHLRNHGFLWLGNAGWSLAPAYDLNPVPSDLKARVLTTNIDLDESTCSVDLLEAASG
HHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHCCC
YFGLTLANARRIIKDVASVTATWRNTARAVGARPAEIERMASAFEHDDLQHGLAL
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA