Click here to switch to the map view.

The map label for this gene is yqgE [C]

Identifier: 92112193

GI number: 92112193

Start: 77917

End: 78474

Strand: Direct

Name: yqgE [C]

Synonym: Csal_0058

Alternate gene names: 92112193

Gene position: 77917-78474 (Clockwise)

Preceding gene: 92112192

Following gene: 92112194

Centisome position: 2.11

GC content: 63.08

Gene sequence:

>558_bases
ATGCAAAGCTTGAAGCACCATTTTTTGCTGGCGATGCCGCATCTCGACGACCCCAATTTCAAGGGGACGCTGACCTATCT
CTGCGATCACGATGAAAACGGCACCATGGGCGTGATCGTCAATCGGCCCATGGAGCTGACGCTCGATGCGCTGCTCGAGC
AGCTGGAACTGGATGCCGCCGAGTGTCCGTGTCGCGAGATGCCGGTCCACTACGGCGGGCCTGTCCACAAGGATCGCGGC
TTCATCCTGCATCGCGGCTCGAGCCTGCCCTGGGACTCCAGCCTGCAGGTTGCCGACGACATCGCGCTGACCACTTCCAT
GGACATGCTCAAGGCGATCGCCAACGGCCAGGGGCCGGAAGACTTCATCGTCTGCCTTGGCTGCGCCGCCTGGCAGGCCG
GTCAGCTCGAGGACGAACTCAAGCAGAACACCTGGCTGACCGTGGAAGGCGATGCCTCGATTCTGTTCGAGGTCCACGCG
GAGCAGCGCCTGAGCGCGGCGGCGGGGATACTCGGCATCGACCTGAACCTGATGAGCCGCGAGGCGGGGCATTCCTGA

Upstream 100 bases:

>100_bases
TGATGGCGAGCCCCGTGCCGGGGAGTGATACAATCGCCGTGAAAGGCACCAATTTCGGCGTGCGCTAGAGGCGAGGCGCG
CCTCGACGCCTGGGAGGCTC

Downstream 100 bases:

>100_bases
TGGCCGAGGCCGGACAACGGCTGGTGCTGGCGTTCGACTTCGGGACGCGGCGCATCGGCGTGGCGGTGGGTAACGAAATG
CTGGGCAGCGCCACGGCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MQSLKHHFLLAMPHLDDPNFKGTLTYLCDHDENGTMGVIVNRPMELTLDALLEQLELDAAECPCREMPVHYGGPVHKDRG
FILHRGSSLPWDSSLQVADDIALTTSMDMLKAIANGQGPEDFIVCLGCAAWQAGQLEDELKQNTWLTVEGDASILFEVHA
EQRLSAAAGILGIDLNLMSREAGHS

Sequences:

>Translated_185_residues
MQSLKHHFLLAMPHLDDPNFKGTLTYLCDHDENGTMGVIVNRPMELTLDALLEQLELDAAECPCREMPVHYGGPVHKDRG
FILHRGSSLPWDSSLQVADDIALTTSMDMLKAIANGQGPEDFIVCLGCAAWQAGQLEDELKQNTWLTVEGDASILFEVHA
EQRLSAAAGILGIDLNLMSREAGHS
>Mature_185_residues
MQSLKHHFLLAMPHLDDPNFKGTLTYLCDHDENGTMGVIVNRPMELTLDALLEQLELDAAECPCREMPVHYGGPVHKDRG
FILHRGSSLPWDSSLQVADDIALTTSMDMLKAIANGQGPEDFIVCLGCAAWQAGQLEDELKQNTWLTVEGDASILFEVHA
EQRLSAAAGILGIDLNLMSREAGHS

Specific function: Unknown

COG id: COG1678

COG function: function code K; Putative transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0301 (AlgH) family

Homologues:

Organism=Escherichia coli, GI87082187, Length=187, Percent_Identity=42.2459893048128, Blast_Score=161, Evalue=2e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y058_CHRSD (Q1R1I6)

Other databases:

- EMBL:   CP000285
- RefSeq:   YP_572121.1
- ProteinModelPortal:   Q1R1I6
- SMR:   Q1R1I6
- STRING:   Q1R1I6
- GeneID:   4027237
- GenomeReviews:   CP000285_GR
- KEGG:   csa:Csal_0058
- NMPDR:   fig|290398.4.peg.294
- eggNOG:   COG1678
- HOGENOM:   HBG530212
- OMA:   LIAMPGM
- BioCyc:   CSAL290398:CSAL_0058-MONOMER
- HAMAP:   MF_00758
- InterPro:   IPR003774

Pfam domain/function: PF02622 DUF179

EC number: NA

Molecular weight: Translated: 20292; Mature: 20292

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSLKHHFLLAMPHLDDPNFKGTLTYLCDHDENGTMGVIVNRPMELTLDALLEQLELDAA
CCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHCCCHH
ECPCREMPVHYGGPVHKDRGFILHRGSSLPWDSSLQVADDIALTTSMDMLKAIANGQGPE
HCCHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCCCC
DFIVCLGCAAWQAGQLEDELKQNTWLTVEGDASILFEVHAEQRLSAAAGILGIDLNLMSR
CEEEEEECCCCCCCCCHHHHHCCCEEEEECCCEEEEEECHHHHHHHHCCEEEEEEEEECC
EAGHS
CCCCC
>Mature Secondary Structure
MQSLKHHFLLAMPHLDDPNFKGTLTYLCDHDENGTMGVIVNRPMELTLDALLEQLELDAA
CCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHCCCHH
ECPCREMPVHYGGPVHKDRGFILHRGSSLPWDSSLQVADDIALTTSMDMLKAIANGQGPE
HCCHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCCCC
DFIVCLGCAAWQAGQLEDELKQNTWLTVEGDASILFEVHAEQRLSAAAGILGIDLNLMSR
CEEEEEECCCCCCCCCHHHHHCCCEEEEECCCEEEEEECHHHHHHHHCCEEEEEEEEECC
EAGHS
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA