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The map label for this gene is 92109677

Identifier: 92109677

GI number: 92109677

Start: 13055

End: 14200

Strand: Reverse

Name: 92109677

Synonym: Nham_4556

Alternate gene names: NA

Gene position: 14200-13055 (Counterclockwise)

Preceding gene: 92109679

Following gene: 92109674

Centisome position: 11.7

GC content: 56.2

Gene sequence:

>1146_bases
ATGCATAGGTCATACGATTATTTTGTTGGGCTCGATGTTTCGCAGAGGACGACATCCGTCTGCATCATCGACGCCGATGG
CAAGAAATTCTGCGAGGGCAAATGTAATTCTCGACCAGAAGACATTCGCGGATGGCTGGTCAACCGCGTTGCCGAGGATA
AGACGCTGAAGATCGGCCTGGAGGCCGGCAACATGAGCAGCTGGCTTTACAGCGGCCTCGTGAAATTTGGCTTCGATGTC
GTCTGCATGGAGACGTTCCAGGCTCATCGGTTTCTGGCCACTTATCGCAACAAGACCGATAAAAACGATGCCCGCGGTCT
AGCACAGCTCGTCCGAATGGGAGGTGAGGATTTCCTCAGGGTAGTCAGCATTCGCTCGCAAGCCTCGCAGGAAACCAGGG
TGCTGCTGGCAATGCGTGATCACCTGGTCAGCCAGAAGGTCGGCCTCGAAAATCATATCGCCGGCGTCCTCAAACCGTTC
GGTGTCATCGTCGAGCGCGGTAACGTGACGGCGGAAACCTTCTACAAGCGGACCCTTGAGGGTCTGGCGGAGGCCGAGCG
AAACGGCGTTCATGTCAGGCCGTATGTGTTGCCATCGCTCAATCTCTACATGGAGGCGGTGGAGAAGATTGCGCCATTGA
CAGAAAAGATTCATGCGATCGCCAATAGTATCGAAATGGTGCGGCGATTTATGGATATTCCCGGCATAGGGCCGATCACC
GCTTTATCGTTCTATGCCGCTGTCGATAATCCGCAGCGCTTCCAGAAGTCGTCGGACGTAGCCGCTTACTTTGGGCTGAC
GCCGCGCCAGTTCCAGTCAGGGGAGACGAACTTCATGGGCGGTATCTCCCGCCGCGGCGATCCGGCAACCCGCCGTGTTC
TCGTGATAGCAGCAACAGTCTTGCTCTCAGGCACACAACAATGGAACAGCCTGAAAGCTTGGGGCGTGCGTCTGGCGAAA
CGTATTGGCTTCTCCAAAGCCCGCATCGCCGTCGCACGGAAGCTGGCGATGATCATGCACAAGATGTGGCTGAACAACGA
TCGTTTCCGGCCAAAGAATCTGAGCCCTCAGGAACGCATCAAGCTCAAACAGGAGCTGATTGTTGTTGCCTCGAAATCCG
GACGGGTCGCCACGGCGGCCGTCTGA

Upstream 100 bases:

>100_bases
ATACGTCACAGGCCCCTATGGTGTAGCCGCGCTGACCGCTTCACCCGGCCGAGAAGGCTTTATCATCTCTCACGTAGGTT
CATCAAACGGAAGAGAGAAC

Downstream 100 bases:

>100_bases
ACGAAAACCCCGGTGAGTTCTGAAGCCGGGGGTCTTGCAGCAAGACGGCAGATGGGTGAGCGACGTTCGGTCGGGTGGCT
GGTTGACCGGGATCTTCTCG

Product: transposase IS116/IS110/IS902

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MHRSYDYFVGLDVSQRTTSVCIIDADGKKFCEGKCNSRPEDIRGWLVNRVAEDKTLKIGLEAGNMSSWLYSGLVKFGFDV
VCMETFQAHRFLATYRNKTDKNDARGLAQLVRMGGEDFLRVVSIRSQASQETRVLLAMRDHLVSQKVGLENHIAGVLKPF
GVIVERGNVTAETFYKRTLEGLAEAERNGVHVRPYVLPSLNLYMEAVEKIAPLTEKIHAIANSIEMVRRFMDIPGIGPIT
ALSFYAAVDNPQRFQKSSDVAAYFGLTPRQFQSGETNFMGGISRRGDPATRRVLVIAATVLLSGTQQWNSLKAWGVRLAK
RIGFSKARIAVARKLAMIMHKMWLNNDRFRPKNLSPQERIKLKQELIVVASKSGRVATAAV

Sequences:

>Translated_381_residues
MHRSYDYFVGLDVSQRTTSVCIIDADGKKFCEGKCNSRPEDIRGWLVNRVAEDKTLKIGLEAGNMSSWLYSGLVKFGFDV
VCMETFQAHRFLATYRNKTDKNDARGLAQLVRMGGEDFLRVVSIRSQASQETRVLLAMRDHLVSQKVGLENHIAGVLKPF
GVIVERGNVTAETFYKRTLEGLAEAERNGVHVRPYVLPSLNLYMEAVEKIAPLTEKIHAIANSIEMVRRFMDIPGIGPIT
ALSFYAAVDNPQRFQKSSDVAAYFGLTPRQFQSGETNFMGGISRRGDPATRRVLVIAATVLLSGTQQWNSLKAWGVRLAK
RIGFSKARIAVARKLAMIMHKMWLNNDRFRPKNLSPQERIKLKQELIVVASKSGRVATAAV
>Mature_381_residues
MHRSYDYFVGLDVSQRTTSVCIIDADGKKFCEGKCNSRPEDIRGWLVNRVAEDKTLKIGLEAGNMSSWLYSGLVKFGFDV
VCMETFQAHRFLATYRNKTDKNDARGLAQLVRMGGEDFLRVVSIRSQASQETRVLLAMRDHLVSQKVGLENHIAGVLKPF
GVIVERGNVTAETFYKRTLEGLAEAERNGVHVRPYVLPSLNLYMEAVEKIAPLTEKIHAIANSIEMVRRFMDIPGIGPIT
ALSFYAAVDNPQRFQKSSDVAAYFGLTPRQFQSGETNFMGGISRRGDPATRRVLVIAATVLLSGTQQWNSLKAWGVRLAK
RIGFSKARIAVARKLAMIMHKMWLNNDRFRPKNLSPQERIKLKQELIVVASKSGRVATAAV

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 42654; Mature: 42654

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRSYDYFVGLDVSQRTTSVCIIDADGKKFCEGKCNSRPEDIRGWLVNRVAEDKTLKIGL
CCCCCCEEEECCCCCCCCEEEEEECCCCHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEE
EAGNMSSWLYSGLVKFGFDVVCMETFQAHRFLATYRNKTDKNDARGLAQLVRMGGEDFLR
ECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHH
VVSIRSQASQETRVLLAMRDHLVSQKVGLENHIAGVLKPFGVIVERGNVTAETFYKRTLE
HHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHH
GLAEAERNGVHVRPYVLPSLNLYMEAVEKIAPLTEKIHAIANSIEMVRRFMDIPGIGPIT
HHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
ALSFYAAVDNPQRFQKSSDVAAYFGLTPRQFQSGETNFMGGISRRGDPATRRVLVIAATV
HHHHHHHCCCHHHHHCCCCCEEEECCCHHHHCCCCCHHCCCCCCCCCHHHHHHHHHHHHH
LLSGTQQWNSLKAWGVRLAKRIGFSKARIAVARKLAMIMHKMWLNNDRFRPKNLSPQERI
HHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
KLKQELIVVASKSGRVATAAV
HHHHHEEEEECCCCCEEECCC
>Mature Secondary Structure
MHRSYDYFVGLDVSQRTTSVCIIDADGKKFCEGKCNSRPEDIRGWLVNRVAEDKTLKIGL
CCCCCCEEEECCCCCCCCEEEEEECCCCHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEE
EAGNMSSWLYSGLVKFGFDVVCMETFQAHRFLATYRNKTDKNDARGLAQLVRMGGEDFLR
ECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHH
VVSIRSQASQETRVLLAMRDHLVSQKVGLENHIAGVLKPFGVIVERGNVTAETFYKRTLE
HHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHH
GLAEAERNGVHVRPYVLPSLNLYMEAVEKIAPLTEKIHAIANSIEMVRRFMDIPGIGPIT
HHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
ALSFYAAVDNPQRFQKSSDVAAYFGLTPRQFQSGETNFMGGISRRGDPATRRVLVIAATV
HHHHHHHCCCHHHHHCCCCCEEEECCCHHHHCCCCCHHCCCCCCCCCHHHHHHHHHHHHH
LLSGTQQWNSLKAWGVRLAKRIGFSKARIAVARKLAMIMHKMWLNNDRFRPKNLSPQERI
HHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
KLKQELIVVASKSGRVATAAV
HHHHHEEEEECCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1324903; 12704232 [H]