Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91790501

Identifier: 91790501

GI number: 91790501

Start: 4959557

End: 4961068

Strand: Reverse

Name: 91790501

Synonym: Bpro_4672

Alternate gene names: NA

Gene position: 4961068-4959557 (Counterclockwise)

Preceding gene: 91790502

Following gene: 91790499

Centisome position: 95.4

GC content: 63.29

Gene sequence:

>1512_bases
GTGCACTTCATTGCTGTTTTTTTGCTCATAGCACTGCCTTGGCTCAATCCATTCGCCCCGGGGCCAACGCCTGCCGTCGT
GCCGCTGCTGTTCTCGTGGGCTTGCGCTGCAGCTTTGCTTGGCGTATGCGCTCGTGTGCCCGGCCGGTTGTGGGTTGGGC
GCTTGATGCCTGCCATCGCGTGGGCCTGGCTGAGTGCCGGACTGCTCAGCAGCGTGATTGGCTTGTGCCAGTACTTTGGT
GCGGCCGGCAACTTTTCTCCCTGGATGAACCAGACTGAAATGGGAGAGGCGTTTGCCAATCTGCGTCAGCGCAATCAGTT
CGCGACCTTGATCAATACGTCCCTGGCGGCCCTGCTTTGGCTCGGGGCGACTGGCCGCTTCATCGGGCGCGGCCAGTGGC
TGGCGTTGGCCGCGGCGGGCCTCCTCGCGGCGGGTAATGCTGCTTCCTCGTCACGGACGGGGCTGCTGCAGATCGGTTTG
CTGTGTTTGATGGTCTGGGTATGGCTAGGGTGGCGCCAGCCCGCTGTTCGCCGCGTGCTCTTGACGGCGGTGGTGGCCTA
CGCGCTGGCAACGTTGGCGCTGCCCTGGCTGGCCGGGTTGGATCCGTCTGCGCACGGCATGTTCGCCCGCTTGCGTGCCG
GGGACCAGATATGCAGCAGTCGCCTCACGCTCTGGTCTAACGTGCTGCACCTGATTGCCCAAAAGCCATGGCTGGGCTGG
GGCTGGGGCGAACTCGACTATGCGCACTACAGCATACTTTACGATGGTCCCCGCTTTTGCGAGATCCTGGACAACGCGCA
CAACCTGCCGCTGCACCTGGCGGTGGAGCTGGGCATTCCGGTGGCGTTGGCAGTATGTGGAGGCTTCGTCTGGTGGGTCT
TCCGGCAACGGCCCTGGCGCGAGACCGACCCGACCCGCCAGATGGCGTGGGGTGTACTCGCCGTCATTCTTTTGCACAGC
ATGCTGGAATACCCCCTATGGTACGGCCCGTTCCAGATGGCGTTTGGCCTGTCCCTGGGCCTGCTCTGGGGAAGCCGCAG
GGCGCAGGCGAGCCCGCTGGAATCTCCGCCGGAGGAGTCACCCGTGTCTATTTTTCAAGCCTTGGCCGCTACTATTCTGA
TAGCTATCGTGGGCTATGCCGGCTGGGACTATCACCGCATCAGTCAGATTTACCTGACGCCCGAAGATCGCGACGCGGCA
TACCGGGACGATACCCTCCCCAAGATTCGCGGCTCCTGGCTGTTTCGCGACCAGGTGCGCTTTGCAGAACTGACCATCAC
GCCGCTCACGCGTGACAATGCGCAATGGACCTTCGACACGGCGAGGGCGCTGCTGCACTACTCACCGGAGCCTCGCATCA
TCGAAAAGGTGATTGAGAGCGCGGTCATGCTCGGCCGGGATGACGAGGCATTGATGCATCTGGCGCGCTATCGGGCGGCC
TTTCCAGTGGAGCATGCGCGCTGGGCGCAAGAAGCTGCGGCGGCGCCGGAGCGTCTTCAGCACCTGAAGTGA

Upstream 100 bases:

>100_bases
TCAGTGTGGCTTACACCACAATGAACAGACCCAAATGGCTATAAGGGGCTTGGTCCGTAACCCTTAACCGTAGCGCGTCG
TTCGCTCACTCTTCTTACTT

Downstream 100 bases:

>100_bases
CGCGGCTCAGGGGTTGACAAAGCTTCCCGATTTGCCGCCATGCTTTTCAAGCACGCGCACATCGGTCATGATCATCGCCC
GGTCCGCCGCCTTGCACATG

Product: O-antigen polymerase

Products: NA

Alternate protein names: O-Antigen Polymerase Family

Number of amino acids: Translated: 503; Mature: 503

Protein sequence:

>503_residues
MHFIAVFLLIALPWLNPFAPGPTPAVVPLLFSWACAAALLGVCARVPGRLWVGRLMPAIAWAWLSAGLLSSVIGLCQYFG
AAGNFSPWMNQTEMGEAFANLRQRNQFATLINTSLAALLWLGATGRFIGRGQWLALAAAGLLAAGNAASSSRTGLLQIGL
LCLMVWVWLGWRQPAVRRVLLTAVVAYALATLALPWLAGLDPSAHGMFARLRAGDQICSSRLTLWSNVLHLIAQKPWLGW
GWGELDYAHYSILYDGPRFCEILDNAHNLPLHLAVELGIPVALAVCGGFVWWVFRQRPWRETDPTRQMAWGVLAVILLHS
MLEYPLWYGPFQMAFGLSLGLLWGSRRAQASPLESPPEESPVSIFQALAATILIAIVGYAGWDYHRISQIYLTPEDRDAA
YRDDTLPKIRGSWLFRDQVRFAELTITPLTRDNAQWTFDTARALLHYSPEPRIIEKVIESAVMLGRDDEALMHLARYRAA
FPVEHARWAQEAAAAPERLQHLK

Sequences:

>Translated_503_residues
MHFIAVFLLIALPWLNPFAPGPTPAVVPLLFSWACAAALLGVCARVPGRLWVGRLMPAIAWAWLSAGLLSSVIGLCQYFG
AAGNFSPWMNQTEMGEAFANLRQRNQFATLINTSLAALLWLGATGRFIGRGQWLALAAAGLLAAGNAASSSRTGLLQIGL
LCLMVWVWLGWRQPAVRRVLLTAVVAYALATLALPWLAGLDPSAHGMFARLRAGDQICSSRLTLWSNVLHLIAQKPWLGW
GWGELDYAHYSILYDGPRFCEILDNAHNLPLHLAVELGIPVALAVCGGFVWWVFRQRPWRETDPTRQMAWGVLAVILLHS
MLEYPLWYGPFQMAFGLSLGLLWGSRRAQASPLESPPEESPVSIFQALAATILIAIVGYAGWDYHRISQIYLTPEDRDAA
YRDDTLPKIRGSWLFRDQVRFAELTITPLTRDNAQWTFDTARALLHYSPEPRIIEKVIESAVMLGRDDEALMHLARYRAA
FPVEHARWAQEAAAAPERLQHLK
>Mature_503_residues
MHFIAVFLLIALPWLNPFAPGPTPAVVPLLFSWACAAALLGVCARVPGRLWVGRLMPAIAWAWLSAGLLSSVIGLCQYFG
AAGNFSPWMNQTEMGEAFANLRQRNQFATLINTSLAALLWLGATGRFIGRGQWLALAAAGLLAAGNAASSSRTGLLQIGL
LCLMVWVWLGWRQPAVRRVLLTAVVAYALATLALPWLAGLDPSAHGMFARLRAGDQICSSRLTLWSNVLHLIAQKPWLGW
GWGELDYAHYSILYDGPRFCEILDNAHNLPLHLAVELGIPVALAVCGGFVWWVFRQRPWRETDPTRQMAWGVLAVILLHS
MLEYPLWYGPFQMAFGLSLGLLWGSRRAQASPLESPPEESPVSIFQALAATILIAIVGYAGWDYHRISQIYLTPEDRDAA
YRDDTLPKIRGSWLFRDQVRFAELTITPLTRDNAQWTFDTARALLHYSPEPRIIEKVIESAVMLGRDDEALMHLARYRAA
FPVEHARWAQEAAAAPERLQHLK

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55916; Mature: 55916

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCHHHHHHHHHHHCCHHHHHCCC
>Mature Secondary Structure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CCHHHHHHHHHHHCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA