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The map label for this gene is secF [H]

Identifier: 91790473

GI number: 91790473

Start: 4926789

End: 4927742

Strand: Reverse

Name: secF [H]

Synonym: Bpro_4644

Alternate gene names: 91790473

Gene position: 4927742-4926789 (Counterclockwise)

Preceding gene: 91790474

Following gene: 91790472

Centisome position: 94.76

GC content: 58.91

Gene sequence:

>954_bases
ATGGAATTTTTCAAAATCCGGCGTGACATTCCGTTCATGCGGCACGCCCTGATCTTCAATGTCATCAGCTTTGCAACGTT
TGCGCTGGCGGTGTTTTTCCTGTTCTCACGCGGCCTGCACCTGTCAGTGGAGTTCACTGGCGGCACGCTGATGGAGGTCA
ATTACGCCCAGGCGGCAGATGTGGGGAAAATCCGGGCGACCGTGGCAGGGCTGGGGCTGACCGATGTGCAAGTGCAAAAC
TTCGGAACGTCGCGTGATGTGATGATCCGTTTGCCGGCCCAGAAGGGTGTCAGCACCGCGCAGCAAAGCGAAAAAGTGCT
GGTGGCGCTGAAGGCGGCCAGCAGCGATGTGACACTGCGCCGCACGGAGTTTGTCGGCCCGCAGGTCGGGGAGGAGCTGG
CCCACGATGGCCTGAAGGCCCTGGCCATGGTGGTGTTCGGCATCATGGTCTACCTCGCCTTCCGCTTTGAGTGGAAGTAT
GCGGTGGCGGCCATCATTGCCAACCTGCATGACGTCGTCATCATTCTCGGTTTTTTCGCGTTCTTCCAGTGGGAGTTTTC
CCTCGCGGTACTGGCCGCCGTGCTGGCGGTACTGGGCTATTCCGTCAATGAGTCCGTGGTGATCTTTGACCGGATCCGCG
AGAACTTTCGCCGCTACCGGAAGATGAACACGGTGCAGATCATCGACAACGCGATCACCTCGACCATCAGCCGTACCATC
ATCACCCACGGCTCAACGCAGATCATGGTGCTGTCCATGCTGCTGTTTGGCGGGCCGACCCTGTTTTACTTCGCCCTGGC
GCTGACCATCGGCATTTTGTTCGGCATTTACTCCTCCGTGTTCGTGGCCGCCGCCATCGCCATGTGGCTGGGCATCCGGC
GTGAAGATCTGGTCAAGGGGCCGGCAAAAAAAGAAGAAGATCCCAACGACCCCAACGCAGGTGCCACGGTGTAA

Upstream 100 bases:

>100_bases
TCAAGACGGTGTCCATCGGCACGGTGTGGCGGCCCGACGCGTCCGGCGCTGTGGCGAAATGACCCCGGCTTCTTGTTTCT
GAGCTTCCCAAGGACCCTCG

Downstream 100 bases:

>100_bases
GCTATAGGCTAATTATTCAGGGCGGTCGTGGCTCCAAGTAACAAAAAGAACACTCTTCTGGTCGAGCAGGCACGTGCTTT
GTTCACGGAGCGTGCCGCAG

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MEFFKIRRDIPFMRHALIFNVISFATFALAVFFLFSRGLHLSVEFTGGTLMEVNYAQAADVGKIRATVAGLGLTDVQVQN
FGTSRDVMIRLPAQKGVSTAQQSEKVLVALKAASSDVTLRRTEFVGPQVGEELAHDGLKALAMVVFGIMVYLAFRFEWKY
AVAAIIANLHDVVIILGFFAFFQWEFSLAVLAAVLAVLGYSVNESVVIFDRIRENFRRYRKMNTVQIIDNAITSTISRTI
ITHGSTQIMVLSMLLFGGPTLFYFALALTIGILFGIYSSVFVAAAIAMWLGIRREDLVKGPAKKEEDPNDPNAGATV

Sequences:

>Translated_317_residues
MEFFKIRRDIPFMRHALIFNVISFATFALAVFFLFSRGLHLSVEFTGGTLMEVNYAQAADVGKIRATVAGLGLTDVQVQN
FGTSRDVMIRLPAQKGVSTAQQSEKVLVALKAASSDVTLRRTEFVGPQVGEELAHDGLKALAMVVFGIMVYLAFRFEWKY
AVAAIIANLHDVVIILGFFAFFQWEFSLAVLAAVLAVLGYSVNESVVIFDRIRENFRRYRKMNTVQIIDNAITSTISRTI
ITHGSTQIMVLSMLLFGGPTLFYFALALTIGILFGIYSSVFVAAAIAMWLGIRREDLVKGPAKKEEDPNDPNAGATV
>Mature_317_residues
MEFFKIRRDIPFMRHALIFNVISFATFALAVFFLFSRGLHLSVEFTGGTLMEVNYAQAADVGKIRATVAGLGLTDVQVQN
FGTSRDVMIRLPAQKGVSTAQQSEKVLVALKAASSDVTLRRTEFVGPQVGEELAHDGLKALAMVVFGIMVYLAFRFEWKY
AVAAIIANLHDVVIILGFFAFFQWEFSLAVLAAVLAVLGYSVNESVVIFDRIRENFRRYRKMNTVQIIDNAITSTISRTI
ITHGSTQIMVLSMLLFGGPTLFYFALALTIGILFGIYSSVFVAAAIAMWLGIRREDLVKGPAKKEEDPNDPNAGATV

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=301, Percent_Identity=37.8737541528239, Blast_Score=228, Evalue=3e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 34996; Mature: 34996

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFFKIRRDIPFMRHALIFNVISFATFALAVFFLFSRGLHLSVEFTGGTLMEVNYAQAAD
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCHHHHC
VGKIRATVAGLGLTDVQVQNFGTSRDVMIRLPAQKGVSTAQQSEKVLVALKAASSDVTLR
HHHHHHHHHCCCCCCEEHHCCCCCCCEEEEECCCCCCHHHHHCCCEEEEEEECCCCCEEE
RTEFVGPQVGEELAHDGLKALAMVVFGIMVYLAFRFEWKYAVAAIIANLHDVVIILGFFA
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFQWEFSLAVLAAVLAVLGYSVNESVVIFDRIRENFRRYRKMNTVQIIDNAITSTISRTI
HHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ITHGSTQIMVLSMLLFGGPTLFYFALALTIGILFGIYSSVFVAAAIAMWLGIRREDLVKG
HHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC
PAKKEEDPNDPNAGATV
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEFFKIRRDIPFMRHALIFNVISFATFALAVFFLFSRGLHLSVEFTGGTLMEVNYAQAAD
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCHHHHC
VGKIRATVAGLGLTDVQVQNFGTSRDVMIRLPAQKGVSTAQQSEKVLVALKAASSDVTLR
HHHHHHHHHCCCCCCEEHHCCCCCCCEEEEECCCCCCHHHHHCCCEEEEEEECCCCCEEE
RTEFVGPQVGEELAHDGLKALAMVVFGIMVYLAFRFEWKYAVAAIIANLHDVVIILGFFA
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFQWEFSLAVLAAVLAVLGYSVNESVVIFDRIRENFRRYRKMNTVQIIDNAITSTISRTI
HHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ITHGSTQIMVLSMLLFGGPTLFYFALALTIGILFGIYSSVFVAAAIAMWLGIRREDLVKG
HHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC
PAKKEEDPNDPNAGATV
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]