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The map label for this gene is ywlC [H]

Identifier: 91790454

GI number: 91790454

Start: 4905417

End: 4906412

Strand: Reverse

Name: ywlC [H]

Synonym: Bpro_4625

Alternate gene names: 91790454

Gene position: 4906412-4905417 (Counterclockwise)

Preceding gene: 91790455

Following gene: 91790450

Centisome position: 94.35

GC content: 70.08

Gene sequence:

>996_bases
ATGATCCTGCCCGGCACCGACCCCCAAGCCATTCATGAAGCCGCCCGCCGCATCCAGGCCGGCGGGCTGGTGGGTTTTCC
GACCGAAACGGTGTATGGCTTGGGCGCCGATGCCTCAAGCGACCAGGCCGTGGCCGGCATTTTTTCAGCCAAGGGCCGTC
CCGCAAACCATCCGCTGATCGTGCATGTGGCCGATGCGCAGCAGGTGGCCGATTACGCGAGCAGCGTGCCGCCGTTTGCG
GCCCGCCTGATGCAGGCCTTCTGGCCCGGGCCGCTCACCGTGATATTGCCGCGCCGGGAAGGTGTGGCCGCAGCCGCTGC
CGGTGGCCAGGGCTCGATCGGGCTGCGCTGCCCCGCGCATCCGGTGGCGCTGGCTTTTTTGCGGGCGTGCGCCACCGGCG
TGGCCGGGCCGAGCGCCAACCGTTTTGGCCGCGTCAGCCCCACCACGGCGCAGCATGTGCAGCAGGAGTTTGGGGACAGC
TTGCTGGTGCTCGATGGCGGACCGTGCGAGGTCGGCATCGAGTCAAGCATTGTCGATTGCACGCGCGGCCGCCCGGTGCT
GCTGCGCCCCGGCGTGCTCACGCGCGCGCAGCTGGAGGCCGCGTGCGGCGAGCCGGTGCTGGACAAGGACGAACTGGCGC
GGGAAGCGGCCGGCCTGGGTGATGCGCCGCGCGCCTCCGGCACGCTGGAGGCGCACTACGCGCCCCATGCCAAGGTGCGC
CTGATGGATGCCGGCGCGATACAGACCGCGCTGGATTTACTGGGCGCGGACGCCGCCCACATCGCGATCTATGCCCGCAG
CATCGTGCGCATCAAGTCCGATCAGGTGCTGTACCGGCGCATGCCGGACGACGCAGCGGCCACCGCGCAGCAGCTGTTTG
CCGTGCTGCGCGACTTTGACGCCCAGGGCGTGAAACTGATCTGGATTGAACACCTGCCCGCCACGGCAGCGTGGGACGGT
GTGCGCGACCGGCTGGCACGGGCTGCCGCCAGCTGA

Upstream 100 bases:

>100_bases
TGGGCCACCTCAACATCACGGGTGCCGATGTCGCGGGCGTGCAGGCCACGGCGCGCAAGGCGGCTGCCATCCTCGGCCTG
CCGGGCCTCGAAGACCACTG

Downstream 100 bases:

>100_bases
AGGAGCACGGACCTACTCCTGCGTCCCCGCGTCCACCCATTGCAGGTAGTCGGTGGAGCCTGCGGTGATGGGGATCTGCA
CGATCTCGGGCGTTTCATTG

Product: translation factor SUA5

Products: NA

Alternate protein names: t(6)A37 threonylcarbamoyladenosine biosynthesis protein YwlC [H]

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MILPGTDPQAIHEAARRIQAGGLVGFPTETVYGLGADASSDQAVAGIFSAKGRPANHPLIVHVADAQQVADYASSVPPFA
ARLMQAFWPGPLTVILPRREGVAAAAAGGQGSIGLRCPAHPVALAFLRACATGVAGPSANRFGRVSPTTAQHVQQEFGDS
LLVLDGGPCEVGIESSIVDCTRGRPVLLRPGVLTRAQLEAACGEPVLDKDELAREAAGLGDAPRASGTLEAHYAPHAKVR
LMDAGAIQTALDLLGADAAHIAIYARSIVRIKSDQVLYRRMPDDAAATAQQLFAVLRDFDAQGVKLIWIEHLPATAAWDG
VRDRLARAAAS

Sequences:

>Translated_331_residues
MILPGTDPQAIHEAARRIQAGGLVGFPTETVYGLGADASSDQAVAGIFSAKGRPANHPLIVHVADAQQVADYASSVPPFA
ARLMQAFWPGPLTVILPRREGVAAAAAGGQGSIGLRCPAHPVALAFLRACATGVAGPSANRFGRVSPTTAQHVQQEFGDS
LLVLDGGPCEVGIESSIVDCTRGRPVLLRPGVLTRAQLEAACGEPVLDKDELAREAAGLGDAPRASGTLEAHYAPHAKVR
LMDAGAIQTALDLLGADAAHIAIYARSIVRIKSDQVLYRRMPDDAAATAQQLFAVLRDFDAQGVKLIWIEHLPATAAWDG
VRDRLARAAAS
>Mature_331_residues
MILPGTDPQAIHEAARRIQAGGLVGFPTETVYGLGADASSDQAVAGIFSAKGRPANHPLIVHVADAQQVADYASSVPPFA
ARLMQAFWPGPLTVILPRREGVAAAAAGGQGSIGLRCPAHPVALAFLRACATGVAGPSANRFGRVSPTTAQHVQQEFGDS
LLVLDGGPCEVGIESSIVDCTRGRPVLLRPGVLTRAQLEAACGEPVLDKDELAREAAGLGDAPRASGTLEAHYAPHAKVR
LMDAGAIQTALDLLGADAAHIAIYARSIVRIKSDQVLYRRMPDDAAATAQQLFAVLRDFDAQGVKLIWIEHLPATAAWDG
VRDRLARAAAS

Specific function: Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine (Probable) [H]

COG id: COG0009

COG function: function code J; Putative translation factor (SUA5)

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YrdC-like domain [H]

Homologues:

Organism=Escherichia coli, GI2367210, Length=159, Percent_Identity=28.3018867924528, Blast_Score=68, Evalue=8e-13,
Organism=Saccharomyces cerevisiae, GI6321269, Length=379, Percent_Identity=32.9815303430079, Blast_Score=166, Evalue=4e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017945
- InterPro:   IPR005145
- InterPro:   IPR004388
- InterPro:   IPR006070
- InterPro:   IPR010923 [H]

Pfam domain/function: PF03481 SUA5; PF01300 Sua5_yciO_yrdC [H]

EC number: NA

Molecular weight: Translated: 34512; Mature: 34512

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS51163 YRDC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILPGTDPQAIHEAARRIQAGGLVGFPTETVYGLGADASSDQAVAGIFSAKGRPANHPLI
CCCCCCCHHHHHHHHHHHHCCCEECCCCHHEEECCCCCCCCCHHHHHHHCCCCCCCCCEE
VHVADAQQVADYASSVPPFAARLMQAFWPGPLTVILPRREGVAAAAAGGQGSIGLRCPAH
EEECCHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEECCCCCCEECCCCCH
PVALAFLRACATGVAGPSANRFGRVSPTTAQHVQQEFGDSLLVLDGGPCEVGIESSIVDC
HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHH
TRGRPVLLRPGVLTRAQLEAACGEPVLDKDELAREAAGLGDAPRASGTLEAHYAPHAKVR
CCCCEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEE
LMDAGAIQTALDLLGADAAHIAIYARSIVRIKSDQVLYRRMPDDAAATAQQLFAVLRDFD
EEECHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHCCC
AQGVKLIWIEHLPATAAWDGVRDRLARAAAS
CCCEEEEEEECCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MILPGTDPQAIHEAARRIQAGGLVGFPTETVYGLGADASSDQAVAGIFSAKGRPANHPLI
CCCCCCCHHHHHHHHHHHHCCCEECCCCHHEEECCCCCCCCCHHHHHHHCCCCCCCCCEE
VHVADAQQVADYASSVPPFAARLMQAFWPGPLTVILPRREGVAAAAAGGQGSIGLRCPAH
EEECCHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEECCCCCCEECCCCCH
PVALAFLRACATGVAGPSANRFGRVSPTTAQHVQQEFGDSLLVLDGGPCEVGIESSIVDC
HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHH
TRGRPVLLRPGVLTRAQLEAACGEPVLDKDELAREAAGLGDAPRASGTLEAHYAPHAKVR
CCCCEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEE
LMDAGAIQTALDLLGADAAHIAIYARSIVRIKSDQVLYRRMPDDAAATAQQLFAVLRDFD
EEECHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHCCC
AQGVKLIWIEHLPATAAWDGVRDRLARAAAS
CCCEEEEEEECCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]