| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91790443
Identifier: 91790443
GI number: 91790443
Start: 4893477
End: 4894703
Strand: Direct
Name: 91790443
Synonym: Bpro_4614
Alternate gene names: NA
Gene position: 4893477-4894703 (Clockwise)
Preceding gene: 91790439
Following gene: 91790444
Centisome position: 94.1
GC content: 65.53
Gene sequence:
>1227_bases ATGTCACTAGAATCCATCCTCTCCGGCCTGGCGGACCCCAAGGAAGAGCTCAATGCCCTGGTGCTGATGGGCGGGGGTGC GCGTACCGCCTATCAGGCGGGCGTCCTCCACGCCCTGTCCAGCATGCTGAGCCTTCAGGGCGACACGTTCAACGAGCGTT TTCCCTTCAAGATCCTGGTGGGAACGTCTGCCGGCGCGCTTAACGCCGCCTTCCTGGCCAGCCGCGCCGACGAAGGATTG CGGGCCTTTGGTCAGCTGGCCAGCTTCTGGACGACGCTGCGTTCGTCGCACGTGTACGATCTCAAAGTTCCAACCTGGAT ACGCTCGAACCGGATTGTGGCGGCCCTGTTTTTGTCGCAGCAGGTGCGCGCCCAGCAGTCGCTGCTGGACAACACGCCGC TGGTAGACACGCTGCACCGCAGCATTTCGCTGGAACGGATTGACCAGGCACTGCAGGACCGGACGCTGCACTCGCTGGCG ATCTCCGCCTCCAGCTACAGCAGCGGGGTGCACTGGACGTTTTGCCAAATGGACCCGTACCGGCAGATCGATTTGTGGAG CCGGCCGGGCCGGCGCGCCGAGTTCCAGCCCATCACCATCGAGCATCTGATGGCCTCCAGCGCCCTTCCCTTCCTGTTTC CGTCCACACCGCTGTGGGTGGATGGCCATCGCGAGTTTTTTGGCGATGGCTCGATGCGCCAGAGTTCGCCGCTGTCGCCC GCCCTGCACCTGGGTGCCGGCAAGGTGCTGGTGATCGGGGTCGGGCAGCCCGAGCGCGCCAGCTTTGCCGGCAACAACGG TCAGAGCGTCAGCGGCCGGCCCACCTTGGGGGCGATTGCCGGCCATGCCATGGCCAGCGTGTTTCAGGACACGCTGCAGG CCGATGTGGAGCAGGCCCAGCGGGTGAGCAGAACCATGCGCCAGCTGCCACGGGAAATCGCCGCCCTGTTGCCTTACCGG CCGGTCGAGGTACTGGCGATGGCCCCTTCGCAGTCGCTCGATGCACTGGCGCAGGCACATGCCGGTGAGCTGCCCACCGG CGCATACAACGCACTGGCGGGCCTGGGCGCGCTCGGCGCCAAAGGCAGCCCGGGTGGCGCAGCCCTGGCTAGCTACCTGT TGTTCGAGCCGGGCTTCGTCAAGGCACTGATGGCGCTGGGCGAGCAGGATGCCTATGCCCGAAAAGACGAGTTGCTGGCT TTTTTCGGCCTGGCGGGCGCTAGATAA
Upstream 100 bases:
>100_bases CCGGGTGATGTAGGCTCCACGAAATGGTGCGTCATGGGATATTCGGGAATCACGCTTTATTGCACCCTCGCACGATGACA GTCGCACCGATCGGCTCAGC
Downstream 100 bases:
>100_bases ATCGGCCTTGAAATGCCATAATCGCCGCTGATTCATTACGGAGAAATCCTTGGAAAGCAGCCCTAGTCGCTAGCTTTCAA CACCGCAGACTGACGTGAAG
Product: patatin
Products: NA
Alternate protein names: Phospholipase Patatin Family; Patatin Family Protein; Alpha-Beta Hydrolase Family Esterase; Patatin Like Phospholipase; Patatin-Like Phospholipase Family; Esterase Of Alpha-Beta Hydrolase Superfamily Protein; Patatin-Like Phospholipase; Phospholipase Patatin Family Protein; Phospholipase; Alpha-Beta Hydrolase Superfamily Protein; Patatin Family Phospholipase; Patatin-Like Phospholipase Family Protein; Lipid Acyl Hydrolase
Number of amino acids: Translated: 408; Mature: 407
Protein sequence:
>408_residues MSLESILSGLADPKEELNALVLMGGGARTAYQAGVLHALSSMLSLQGDTFNERFPFKILVGTSAGALNAAFLASRADEGL RAFGQLASFWTTLRSSHVYDLKVPTWIRSNRIVAALFLSQQVRAQQSLLDNTPLVDTLHRSISLERIDQALQDRTLHSLA ISASSYSSGVHWTFCQMDPYRQIDLWSRPGRRAEFQPITIEHLMASSALPFLFPSTPLWVDGHREFFGDGSMRQSSPLSP ALHLGAGKVLVIGVGQPERASFAGNNGQSVSGRPTLGAIAGHAMASVFQDTLQADVEQAQRVSRTMRQLPREIAALLPYR PVEVLAMAPSQSLDALAQAHAGELPTGAYNALAGLGALGAKGSPGGAALASYLLFEPGFVKALMALGEQDAYARKDELLA FFGLAGAR
Sequences:
>Translated_408_residues MSLESILSGLADPKEELNALVLMGGGARTAYQAGVLHALSSMLSLQGDTFNERFPFKILVGTSAGALNAAFLASRADEGL RAFGQLASFWTTLRSSHVYDLKVPTWIRSNRIVAALFLSQQVRAQQSLLDNTPLVDTLHRSISLERIDQALQDRTLHSLA ISASSYSSGVHWTFCQMDPYRQIDLWSRPGRRAEFQPITIEHLMASSALPFLFPSTPLWVDGHREFFGDGSMRQSSPLSP ALHLGAGKVLVIGVGQPERASFAGNNGQSVSGRPTLGAIAGHAMASVFQDTLQADVEQAQRVSRTMRQLPREIAALLPYR PVEVLAMAPSQSLDALAQAHAGELPTGAYNALAGLGALGAKGSPGGAALASYLLFEPGFVKALMALGEQDAYARKDELLA FFGLAGAR >Mature_407_residues SLESILSGLADPKEELNALVLMGGGARTAYQAGVLHALSSMLSLQGDTFNERFPFKILVGTSAGALNAAFLASRADEGLR AFGQLASFWTTLRSSHVYDLKVPTWIRSNRIVAALFLSQQVRAQQSLLDNTPLVDTLHRSISLERIDQALQDRTLHSLAI SASSYSSGVHWTFCQMDPYRQIDLWSRPGRRAEFQPITIEHLMASSALPFLFPSTPLWVDGHREFFGDGSMRQSSPLSPA LHLGAGKVLVIGVGQPERASFAGNNGQSVSGRPTLGAIAGHAMASVFQDTLQADVEQAQRVSRTMRQLPREIAALLPYRP VEVLAMAPSQSLDALAQAHAGELPTGAYNALAGLGALGAKGSPGGAALASYLLFEPGFVKALMALGEQDAYARKDELLAF FGLAGAR
Specific function: Unknown
COG id: COG1752
COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43685; Mature: 43554
Theoretical pI: Translated: 7.39; Mature: 7.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLESILSGLADPKEELNALVLMGGGARTAYQAGVLHALSSMLSLQGDTFNERFPFKILV CCHHHHHHHCCCCHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE GTSAGALNAAFLASRADEGLRAFGQLASFWTTLRSSHVYDLKVPTWIRSNRIVAALFLSQ ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEECCCCEEEHHHHHH QVRAQQSLLDNTPLVDTLHRSISLERIDQALQDRTLHSLAISASSYSSGVHWTFCQMDPY HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEECCCCC RQIDLWSRPGRRAEFQPITIEHLMASSALPFLFPSTPLWVDGHREFFGDGSMRQSSPLSP CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEECCCHHHCCCCCCCCCCCCCC ALHLGAGKVLVIGVGQPERASFAGNNGQSVSGRPTLGAIAGHAMASVFQDTLQADVEQAQ HHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RVSRTMRQLPREIAALLPYRPVEVLAMAPSQSLDALAQAHAGELPTGAYNALAGLGALGA HHHHHHHHHHHHHHHHCCCCCHHHEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC KGSPGGAALASYLLFEPGFVKALMALGEQDAYARKDELLAFFGLAGAR CCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SLESILSGLADPKEELNALVLMGGGARTAYQAGVLHALSSMLSLQGDTFNERFPFKILV CHHHHHHHCCCCHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE GTSAGALNAAFLASRADEGLRAFGQLASFWTTLRSSHVYDLKVPTWIRSNRIVAALFLSQ ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEECCCCEEEHHHHHH QVRAQQSLLDNTPLVDTLHRSISLERIDQALQDRTLHSLAISASSYSSGVHWTFCQMDPY HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEECCCCC RQIDLWSRPGRRAEFQPITIEHLMASSALPFLFPSTPLWVDGHREFFGDGSMRQSSPLSP CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEECCCHHHCCCCCCCCCCCCCC ALHLGAGKVLVIGVGQPERASFAGNNGQSVSGRPTLGAIAGHAMASVFQDTLQADVEQAQ HHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RVSRTMRQLPREIAALLPYRPVEVLAMAPSQSLDALAQAHAGELPTGAYNALAGLGALGA HHHHHHHHHHHHHHHHCCCCCHHHEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC KGSPGGAALASYLLFEPGFVKALMALGEQDAYARKDELLAFFGLAGAR CCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA