Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91790443

Identifier: 91790443

GI number: 91790443

Start: 4893477

End: 4894703

Strand: Direct

Name: 91790443

Synonym: Bpro_4614

Alternate gene names: NA

Gene position: 4893477-4894703 (Clockwise)

Preceding gene: 91790439

Following gene: 91790444

Centisome position: 94.1

GC content: 65.53

Gene sequence:

>1227_bases
ATGTCACTAGAATCCATCCTCTCCGGCCTGGCGGACCCCAAGGAAGAGCTCAATGCCCTGGTGCTGATGGGCGGGGGTGC
GCGTACCGCCTATCAGGCGGGCGTCCTCCACGCCCTGTCCAGCATGCTGAGCCTTCAGGGCGACACGTTCAACGAGCGTT
TTCCCTTCAAGATCCTGGTGGGAACGTCTGCCGGCGCGCTTAACGCCGCCTTCCTGGCCAGCCGCGCCGACGAAGGATTG
CGGGCCTTTGGTCAGCTGGCCAGCTTCTGGACGACGCTGCGTTCGTCGCACGTGTACGATCTCAAAGTTCCAACCTGGAT
ACGCTCGAACCGGATTGTGGCGGCCCTGTTTTTGTCGCAGCAGGTGCGCGCCCAGCAGTCGCTGCTGGACAACACGCCGC
TGGTAGACACGCTGCACCGCAGCATTTCGCTGGAACGGATTGACCAGGCACTGCAGGACCGGACGCTGCACTCGCTGGCG
ATCTCCGCCTCCAGCTACAGCAGCGGGGTGCACTGGACGTTTTGCCAAATGGACCCGTACCGGCAGATCGATTTGTGGAG
CCGGCCGGGCCGGCGCGCCGAGTTCCAGCCCATCACCATCGAGCATCTGATGGCCTCCAGCGCCCTTCCCTTCCTGTTTC
CGTCCACACCGCTGTGGGTGGATGGCCATCGCGAGTTTTTTGGCGATGGCTCGATGCGCCAGAGTTCGCCGCTGTCGCCC
GCCCTGCACCTGGGTGCCGGCAAGGTGCTGGTGATCGGGGTCGGGCAGCCCGAGCGCGCCAGCTTTGCCGGCAACAACGG
TCAGAGCGTCAGCGGCCGGCCCACCTTGGGGGCGATTGCCGGCCATGCCATGGCCAGCGTGTTTCAGGACACGCTGCAGG
CCGATGTGGAGCAGGCCCAGCGGGTGAGCAGAACCATGCGCCAGCTGCCACGGGAAATCGCCGCCCTGTTGCCTTACCGG
CCGGTCGAGGTACTGGCGATGGCCCCTTCGCAGTCGCTCGATGCACTGGCGCAGGCACATGCCGGTGAGCTGCCCACCGG
CGCATACAACGCACTGGCGGGCCTGGGCGCGCTCGGCGCCAAAGGCAGCCCGGGTGGCGCAGCCCTGGCTAGCTACCTGT
TGTTCGAGCCGGGCTTCGTCAAGGCACTGATGGCGCTGGGCGAGCAGGATGCCTATGCCCGAAAAGACGAGTTGCTGGCT
TTTTTCGGCCTGGCGGGCGCTAGATAA

Upstream 100 bases:

>100_bases
CCGGGTGATGTAGGCTCCACGAAATGGTGCGTCATGGGATATTCGGGAATCACGCTTTATTGCACCCTCGCACGATGACA
GTCGCACCGATCGGCTCAGC

Downstream 100 bases:

>100_bases
ATCGGCCTTGAAATGCCATAATCGCCGCTGATTCATTACGGAGAAATCCTTGGAAAGCAGCCCTAGTCGCTAGCTTTCAA
CACCGCAGACTGACGTGAAG

Product: patatin

Products: NA

Alternate protein names: Phospholipase Patatin Family; Patatin Family Protein; Alpha-Beta Hydrolase Family Esterase; Patatin Like Phospholipase; Patatin-Like Phospholipase Family; Esterase Of Alpha-Beta Hydrolase Superfamily Protein; Patatin-Like Phospholipase; Phospholipase Patatin Family Protein; Phospholipase; Alpha-Beta Hydrolase Superfamily Protein; Patatin Family Phospholipase; Patatin-Like Phospholipase Family Protein; Lipid Acyl Hydrolase

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MSLESILSGLADPKEELNALVLMGGGARTAYQAGVLHALSSMLSLQGDTFNERFPFKILVGTSAGALNAAFLASRADEGL
RAFGQLASFWTTLRSSHVYDLKVPTWIRSNRIVAALFLSQQVRAQQSLLDNTPLVDTLHRSISLERIDQALQDRTLHSLA
ISASSYSSGVHWTFCQMDPYRQIDLWSRPGRRAEFQPITIEHLMASSALPFLFPSTPLWVDGHREFFGDGSMRQSSPLSP
ALHLGAGKVLVIGVGQPERASFAGNNGQSVSGRPTLGAIAGHAMASVFQDTLQADVEQAQRVSRTMRQLPREIAALLPYR
PVEVLAMAPSQSLDALAQAHAGELPTGAYNALAGLGALGAKGSPGGAALASYLLFEPGFVKALMALGEQDAYARKDELLA
FFGLAGAR

Sequences:

>Translated_408_residues
MSLESILSGLADPKEELNALVLMGGGARTAYQAGVLHALSSMLSLQGDTFNERFPFKILVGTSAGALNAAFLASRADEGL
RAFGQLASFWTTLRSSHVYDLKVPTWIRSNRIVAALFLSQQVRAQQSLLDNTPLVDTLHRSISLERIDQALQDRTLHSLA
ISASSYSSGVHWTFCQMDPYRQIDLWSRPGRRAEFQPITIEHLMASSALPFLFPSTPLWVDGHREFFGDGSMRQSSPLSP
ALHLGAGKVLVIGVGQPERASFAGNNGQSVSGRPTLGAIAGHAMASVFQDTLQADVEQAQRVSRTMRQLPREIAALLPYR
PVEVLAMAPSQSLDALAQAHAGELPTGAYNALAGLGALGAKGSPGGAALASYLLFEPGFVKALMALGEQDAYARKDELLA
FFGLAGAR
>Mature_407_residues
SLESILSGLADPKEELNALVLMGGGARTAYQAGVLHALSSMLSLQGDTFNERFPFKILVGTSAGALNAAFLASRADEGLR
AFGQLASFWTTLRSSHVYDLKVPTWIRSNRIVAALFLSQQVRAQQSLLDNTPLVDTLHRSISLERIDQALQDRTLHSLAI
SASSYSSGVHWTFCQMDPYRQIDLWSRPGRRAEFQPITIEHLMASSALPFLFPSTPLWVDGHREFFGDGSMRQSSPLSPA
LHLGAGKVLVIGVGQPERASFAGNNGQSVSGRPTLGAIAGHAMASVFQDTLQADVEQAQRVSRTMRQLPREIAALLPYRP
VEVLAMAPSQSLDALAQAHAGELPTGAYNALAGLGALGAKGSPGGAALASYLLFEPGFVKALMALGEQDAYARKDELLAF
FGLAGAR

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43685; Mature: 43554

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLESILSGLADPKEELNALVLMGGGARTAYQAGVLHALSSMLSLQGDTFNERFPFKILV
CCHHHHHHHCCCCHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE
GTSAGALNAAFLASRADEGLRAFGQLASFWTTLRSSHVYDLKVPTWIRSNRIVAALFLSQ
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEECCCCEEEHHHHHH
QVRAQQSLLDNTPLVDTLHRSISLERIDQALQDRTLHSLAISASSYSSGVHWTFCQMDPY
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEECCCCC
RQIDLWSRPGRRAEFQPITIEHLMASSALPFLFPSTPLWVDGHREFFGDGSMRQSSPLSP
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEECCCHHHCCCCCCCCCCCCCC
ALHLGAGKVLVIGVGQPERASFAGNNGQSVSGRPTLGAIAGHAMASVFQDTLQADVEQAQ
HHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RVSRTMRQLPREIAALLPYRPVEVLAMAPSQSLDALAQAHAGELPTGAYNALAGLGALGA
HHHHHHHHHHHHHHHHCCCCCHHHEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC
KGSPGGAALASYLLFEPGFVKALMALGEQDAYARKDELLAFFGLAGAR
CCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SLESILSGLADPKEELNALVLMGGGARTAYQAGVLHALSSMLSLQGDTFNERFPFKILV
CHHHHHHHCCCCHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE
GTSAGALNAAFLASRADEGLRAFGQLASFWTTLRSSHVYDLKVPTWIRSNRIVAALFLSQ
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEECCCCEEEHHHHHH
QVRAQQSLLDNTPLVDTLHRSISLERIDQALQDRTLHSLAISASSYSSGVHWTFCQMDPY
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEECCCCC
RQIDLWSRPGRRAEFQPITIEHLMASSALPFLFPSTPLWVDGHREFFGDGSMRQSSPLSP
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEECCCHHHCCCCCCCCCCCCCC
ALHLGAGKVLVIGVGQPERASFAGNNGQSVSGRPTLGAIAGHAMASVFQDTLQADVEQAQ
HHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RVSRTMRQLPREIAALLPYRPVEVLAMAPSQSLDALAQAHAGELPTGAYNALAGLGALGA
HHHHHHHHHHHHHHHHCCCCCHHHEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC
KGSPGGAALASYLLFEPGFVKALMALGEQDAYARKDELLAFFGLAGAR
CCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA