| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is fur [H]
Identifier: 91790439
GI number: 91790439
Start: 4890192
End: 4890737
Strand: Direct
Name: fur [H]
Synonym: Bpro_4610
Alternate gene names: 91790439
Gene position: 4890192-4890737 (Clockwise)
Preceding gene: 91790432
Following gene: 91790443
Centisome position: 94.04
GC content: 60.81
Gene sequence:
>546_bases ATGATTGATCATTGTAGCGGCTGGGTGCATCCCGACCCCGGATCCGGCCGCCAGGGGCCGTGCGCCCTGTCCCCGAAAGA GATTCCCATGAGCAACATTGACGAGTTAAAAAGCACCGGCCTCAAGGCCACCTTGCCGCGCCTGAAGATCCTGGAGATTT TTCAGGCTGGCAAGCAGCGCCACATGACGGCGGAAGACGTCTTCCGGGTACTGCTGGAAGACCGGTCGGATATCGGCCTA GCCACCGTCTACCGCGTGCTGACCCAGTTCGAGCAGGCGGGGCTGCTCAATCGCAGCAATTTCGAGTCGGGCAAGGCGGT CTACGAGATCAATGAAGGCCAGCACCACGACCACCTGGTGTGCCTGGATTGCGGCAAGGTTGAGGAGTTTTACGACGCCG AGATTGAAAAACGCCAGCATGCCGTGGCCAAGGCCAAGGGGTTTGCCATCGCCGACCACTCCCTCTCGATGTACGCCAAT TGCACCAAGGACAACTGCCCCAACCGGGGAACCGCGCCCGTGCGCCATCACCACCACCACCTCTGA
Upstream 100 bases:
>100_bases TCGCGCTGCTGCAGGACGCCAGCACCGCGCATGCCAAGACGATGGAAGCTGTTTGGATGCTGTAATGATGATTTGCAGAC ATGGAATTGGGTGTAGCGAT
Downstream 100 bases:
>100_bases GTTTTCAGAGAAGAGGCCGTACCGGCCCAATCGGAACAGGCGCAGCCGGCTATTAATTCAGTGGCACATCAGCCCCCGAG GGGCTGGAGCCTGCGTGGGG
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MIDHCSGWVHPDPGSGRQGPCALSPKEIPMSNIDELKSTGLKATLPRLKILEIFQAGKQRHMTAEDVFRVLLEDRSDIGL ATVYRVLTQFEQAGLLNRSNFESGKAVYEINEGQHHDHLVCLDCGKVEEFYDAEIEKRQHAVAKAKGFAIADHSLSMYAN CTKDNCPNRGTAPVRHHHHHL
Sequences:
>Translated_181_residues MIDHCSGWVHPDPGSGRQGPCALSPKEIPMSNIDELKSTGLKATLPRLKILEIFQAGKQRHMTAEDVFRVLLEDRSDIGL ATVYRVLTQFEQAGLLNRSNFESGKAVYEINEGQHHDHLVCLDCGKVEEFYDAEIEKRQHAVAKAKGFAIADHSLSMYAN CTKDNCPNRGTAPVRHHHHHL >Mature_181_residues MIDHCSGWVHPDPGSGRQGPCALSPKEIPMSNIDELKSTGLKATLPRLKILEIFQAGKQRHMTAEDVFRVLLEDRSDIGL ATVYRVLTQFEQAGLLNRSNFESGKAVYEINEGQHHDHLVCLDCGKVEEFYDAEIEKRQHAVAKAKGFAIADHSLSMYAN CTKDNCPNRGTAPVRHHHHHL
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes. Regulator for biosynthesis of the siderophore alcaligin E [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=131, Percent_Identity=52.6717557251908, Blast_Score=152, Evalue=2e-38,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 20262; Mature: 20262
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDHCSGWVHPDPGSGRQGPCALSPKEIPMSNIDELKSTGLKATLPRLKILEIFQAGKQR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHCCHHHHHHHHHHHHHC HMTAEDVFRVLLEDRSDIGLATVYRVLTQFEQAGLLNRSNFESGKAVYEINEGQHHDHLV CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEE CLDCGKVEEFYDAEIEKRQHAVAKAKGFAIADHSLSMYANCTKDNCPNRGTAPVRHHHHH EEECCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEECCCCCCCCCCCCCCCCCCCCC L C >Mature Secondary Structure MIDHCSGWVHPDPGSGRQGPCALSPKEIPMSNIDELKSTGLKATLPRLKILEIFQAGKQR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHCCHHHHHHHHHHHHHC HMTAEDVFRVLLEDRSDIGLATVYRVLTQFEQAGLLNRSNFESGKAVYEINEGQHHDHLV CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEE CLDCGKVEEFYDAEIEKRQHAVAKAKGFAIADHSLSMYANCTKDNCPNRGTAPVRHHHHH EEECCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEECCCCCCCCCCCCCCCCCCCCC L C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA