| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91790400
Identifier: 91790400
GI number: 91790400
Start: 4841179
End: 4841997
Strand: Reverse
Name: 91790400
Synonym: Bpro_4571
Alternate gene names: NA
Gene position: 4841997-4841179 (Counterclockwise)
Preceding gene: 91790401
Following gene: 91790398
Centisome position: 93.11
GC content: 64.84
Gene sequence:
>819_bases ATGCAAGCCACCCACAACACCACCTACGACGGCGCCTGCGACTGCCATGTGCACATTTACGAAGACAAGTACCCCCTGAT CCCGAATGTGGCGGTGATTCCGCCGCACTCGCCGGTCTCAAGCTACCGCGAGGTGCAGCAGGCGCTGGGCCTTTCGCGTG CCATCATCGTGCAGCCCACGGGCTACGGTTTTGACAACAGCTGCACCCTGGATGCGCTGGCCCAGCTTGGTGACGTTGCC CGCGGCATTGCGCTGGTCGCGCCGGATGCGCCCGACGCGGAGTTCCAGCGGCTGCATGACGGCGGCATGCGCGGCGTGCG TTTCATGATGCTGGGCGGCATGCTGCCCTGGGAATCGCTGGAGCCCATGGCGGCACGGCTGGAGCACTTCGGCTGGATGA TCAACCTGCAGCTCGATGGCCGCAAGCTGCCGGACCATGAGGCGGTGCTGAAACGCCTGCCCTGCCAGGTGGTGATTGAT CACAACGGCAAATTCCTCGAGCCCGTCAGTCCGGACCATGCCTCCTTCCAGTCGCTGCTGCGCATACTCGATACCGGCCG CGCCTGGATCAAGCTGTCGGCGCCTTACGAAACTTCCCAAACCGGCGCGCCCGGCTATGACGATGTCAGCCTGCTGGCGC GCACCCTGGCCGAGAAGTTTCCCGAGCGCTGCCTCTGGGCCAGCAACTGGCCGCATCCGGGGCGCAACCCCGCGCCGTCG AATGTTGCGATGTACGACCTGCTGTTTTCCTGGGCAGCCAGCGACGCGGCGCGCCAGAAAATCCTGGTGGACAACCCGGC ACAGCTGTACGGGTTTTAG
Upstream 100 bases:
>100_bases CGCTGGCAACAGGCGTTTGGCACGACGCAGCCAGCCTGAGCCCGGGCGCTCACGGCCGGTCAGACTTTTTTGACCTCCAC GCAAATCCCGGAAGACTTTT
Downstream 100 bases:
>100_bases ACAGTCGCTATAAAAATGTAGCTGATTGCGCGCGTCGGATAGGGGTTGAGGCCTTCAATGACGATGGCTTCACCGGTTGG CGGTGCTGTTGCCGCCGCAG
Product: amidohydrolase 2
Products: NA
Alternate protein names: 2-Pyrone-4 6-Dicarboxylic Acid Hydrolase; Amidohydrolase; Dicarboxylic Acid Hydrolase; Metal-Dependent Hydrolase; 2-Pyrone-4 6-Dicarbaxylate Hydrolase; Amidohydrolase Family Protein; 2-Pyrone-4 6-Dicarboxylate Hydrolase; 2-Pyrone-4 6-Dicarboxylate Lactonase; (2-Pyrone-4 6-)Dicarboxylic Acid Hydrolase; Amidase; Amidohydrolase 2 Family; Hydrolase Amidohydrolase 2 Motif; Amidohydrolase Family; Aminohydrolase; PDC Hydrolase-Like Protein; Metal-Dependent Hydrolase Of TIM-Barrel Fold; Metal-Dependent Transmembrane Hydrolase; Transcriptional Regulator GntR; Metal-Dependent Hydrolase Of TIM-Barrel Fold Family; Metal-Dependent Hydrolase Protein; Exported Protein
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MQATHNTTYDGACDCHVHIYEDKYPLIPNVAVIPPHSPVSSYREVQQALGLSRAIIVQPTGYGFDNSCTLDALAQLGDVA RGIALVAPDAPDAEFQRLHDGGMRGVRFMMLGGMLPWESLEPMAARLEHFGWMINLQLDGRKLPDHEAVLKRLPCQVVID HNGKFLEPVSPDHASFQSLLRILDTGRAWIKLSAPYETSQTGAPGYDDVSLLARTLAEKFPERCLWASNWPHPGRNPAPS NVAMYDLLFSWAASDAARQKILVDNPAQLYGF
Sequences:
>Translated_272_residues MQATHNTTYDGACDCHVHIYEDKYPLIPNVAVIPPHSPVSSYREVQQALGLSRAIIVQPTGYGFDNSCTLDALAQLGDVA RGIALVAPDAPDAEFQRLHDGGMRGVRFMMLGGMLPWESLEPMAARLEHFGWMINLQLDGRKLPDHEAVLKRLPCQVVID HNGKFLEPVSPDHASFQSLLRILDTGRAWIKLSAPYETSQTGAPGYDDVSLLARTLAEKFPERCLWASNWPHPGRNPAPS NVAMYDLLFSWAASDAARQKILVDNPAQLYGF >Mature_272_residues MQATHNTTYDGACDCHVHIYEDKYPLIPNVAVIPPHSPVSSYREVQQALGLSRAIIVQPTGYGFDNSCTLDALAQLGDVA RGIALVAPDAPDAEFQRLHDGGMRGVRFMMLGGMLPWESLEPMAARLEHFGWMINLQLDGRKLPDHEAVLKRLPCQVVID HNGKFLEPVSPDHASFQSLLRILDTGRAWIKLSAPYETSQTGAPGYDDVSLLARTLAEKFPERCLWASNWPHPGRNPAPS NVAMYDLLFSWAASDAARQKILVDNPAQLYGF
Specific function: Unknown
COG id: COG3618
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30088; Mature: 30088
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQATHNTTYDGACDCHVHIYEDKYPLIPNVAVIPPHSPVSSYREVQQALGLSRAIIVQPT CCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCEEEEECCC GYGFDNSCTLDALAQLGDVARGIALVAPDAPDAEFQRLHDGGMRGVRFMMLGGMLPWESL CCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCHHC EPMAARLEHFGWMINLQLDGRKLPDHEAVLKRLPCQVVIDHNGKFLEPVSPDHASFQSLL CHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHH RILDTGRAWIKLSAPYETSQTGAPGYDDVSLLARTLAEKFPERCLWASNWPHPGRNPAPS HHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC NVAMYDLLFSWAASDAARQKILVDNPAQLYGF CHHHHHHHHHHHHHHHHHCEEEECCCHHHCCC >Mature Secondary Structure MQATHNTTYDGACDCHVHIYEDKYPLIPNVAVIPPHSPVSSYREVQQALGLSRAIIVQPT CCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCEEEEECCC GYGFDNSCTLDALAQLGDVARGIALVAPDAPDAEFQRLHDGGMRGVRFMMLGGMLPWESL CCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCHHC EPMAARLEHFGWMINLQLDGRKLPDHEAVLKRLPCQVVIDHNGKFLEPVSPDHASFQSLL CHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHH RILDTGRAWIKLSAPYETSQTGAPGYDDVSLLARTLAEKFPERCLWASNWPHPGRNPAPS HHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC NVAMYDLLFSWAASDAARQKILVDNPAQLYGF CHHHHHHHHHHHHHHHHHCEEEECCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA