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The map label for this gene is acoR [H]

Identifier: 91790398

GI number: 91790398

Start: 4837183

End: 4839099

Strand: Reverse

Name: acoR [H]

Synonym: Bpro_4569

Alternate gene names: 91790398

Gene position: 4839099-4837183 (Counterclockwise)

Preceding gene: 91790400

Following gene: 91790396

Centisome position: 93.05

GC content: 66.61

Gene sequence:

>1917_bases
GTGCGAACAACATCAACCGCGTTGGCATTGCGTCAGGCGCGGCTGCATCTGCTGGAACACGGTGACTGCCCGTCAGCCGG
CATCGACGACCGGCTTGCCCGTTCGTGGCGGCGTAGCCTGGCAGCCGGCCTGTCGCCCACCGACCGCCTGGCCGACACCG
AACACGCCAGCGACGGCAATCTGCGCCGCGCACTGGCGTTCAACCACGATCTGCTCGCACATTCCCTGCCGGTGATGGAA
TACCTCTTCGAGCAGGTGCGGCACAGCCAGAGCATGGTCGTCCTGGCCGACCCGCGTGGCACGCTGATCAACACCTTGGG
CGATGCCGATTTTCTCGACAAGGCCGAACGCGCGGCGCTGACCTCCGGCGCCTCGTGGCACGAGCAGCACCGCGGTACCA
ACGCCATTGGCACCGCGCTGGCCGAAGGCAGCGGCGTCGAAATTCACGGCAGCGAGCACTTTCTCGAGCGCAACGGATTT
CTCACCTGCGCGGCCGCGCCCATCATGTCGGCCAGCGGCGAGCTGATGGGCATTCTCGACCTGTCCGGCGGCCAGCGCAG
CCGGCATCCGTTTGCCCTGGGGCTGGTCAGCACGGCGGCGTGCATGATCGAAAACCGCCTGGTCATTTCCAGCTGCCGGC
AATACATCCGCCTGCACCTGCACGCTCACTTCGAGGGCATAGGCAGCGTGGCCGAGGGCATCATCGCCCTCTCGGACGAC
GGCTGGATCGTTGGCGCCAACCGCAAGGGTCTGGCCCTGCTTCATCTGGCATGGTCTGATCTGGGCGCCACGCCGCTGGC
CCGCGCGATCGATGTGCGCCTTGACGAATTGCTGTCCCGGCACAAGCGCCGTCCCGGCCAGCCGACGCAGGTGCAGCTGC
ACGACGGCACCACGCTCTTTGTGCAGGTGCATGCCGAGCCGTCAGGACTGGTCGCCGCCCCGGCGTCCGGCACTGGCAAG
GTCGGCGCCACGCAGCCCGATGCGCTGGCCCGCCTCGACACCGGCGACCTGCGCTGGCTCAGCGCTGCCCAGAAAGCCCG
GCGCGTGGCCGGTAAGCCCATCCCGCTGCTGATCCAGGGTGAATCGGGGGTGGGCAAGGAGCTTTTCGCCCGCGCCACGC
ACGACAGCGGACCCCGCCGTGACGGCCCCTTCGTGGCCATCAACTGCGCCGCCGTGCCGGAAAACCTGATCGAAGCAGAA
TTGTTTGGCTATGCACCAGGAGCGTTTACTGGCGCGCGGCGTGAAGGCAGCGCGGGCCGTCTGCGTGAAGCCCACGGCGG
CACGCTTTTTCTCGATGAAGTCGGCGACATGCCGCTGAGCATGCAGACCCGCCTGTTGCGCGTGCTGCAGGAGCGGCAGG
TCACCCCGCTCGGCGGCGGCCGGCCGGTTGATGTCGATTTCGCCCTGATCTGCGCCACCCACCGCAATCTGCGCGAAGCG
GCCGACAAGGGCAGTTTCCGCAGCGATCTCTACTACCGCATCAACGGCCTGACTGTCCATCTCCCGCCCCTGCGCGAACG
CAGCGATTTTGGGGTGCTGACCGAGCGCCTGCTGGCCAGCTTCAATCCCGAATGCGATATTCGCCTCGCACCTGATCTGT
TGGCGCGATTGAGCCGGCATGCATGGCCTGGCAACCTGCGCCAGTACGCCAGTATGCTGCGCACCGCCAGCGCCATGCTG
GACCCGCATGAGGAATGTATCGACTGGCAGCACTTGCCAGATGACATCAAGGAAGAACTCGCCGCCTTGACGCAACCGGT
CACCTCCCCGAGCGCAGGGGGCCCATCACAAAACCTCGACGAACTGTCCCGCGCGGCCATCCGGCAGGCGCTGGAGAGCA
GTTGCGGCAATATCTCGCAAGCCGCCAGGCGCCTCGGGATCAGCCGGCAAACGCTTTACCGCAAACTCAACGCCTGA

Upstream 100 bases:

>100_bases
CCTGGTTCGTGCAGCCTTCACTGTCATTCACAGCCATTGCGTCGGCCTGCCATCTCGCTACACTTGGTCAGGAACGGACA
ACACTCGGCCAGGAGACAAA

Downstream 100 bases:

>100_bases
ACTCGCGCGAAGGCTCCGCTCGTGGCGTGAAATTCACGTCCGGCCCGGGTTGGCGGCGACACATCGATCGGGTCAAAGCA
GGCGTTTCAAATAGCGGCCG

Product: sigma-54 dependent trancsriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 638; Mature: 638

Protein sequence:

>638_residues
MRTTSTALALRQARLHLLEHGDCPSAGIDDRLARSWRRSLAAGLSPTDRLADTEHASDGNLRRALAFNHDLLAHSLPVME
YLFEQVRHSQSMVVLADPRGTLINTLGDADFLDKAERAALTSGASWHEQHRGTNAIGTALAEGSGVEIHGSEHFLERNGF
LTCAAAPIMSASGELMGILDLSGGQRSRHPFALGLVSTAACMIENRLVISSCRQYIRLHLHAHFEGIGSVAEGIIALSDD
GWIVGANRKGLALLHLAWSDLGATPLARAIDVRLDELLSRHKRRPGQPTQVQLHDGTTLFVQVHAEPSGLVAAPASGTGK
VGATQPDALARLDTGDLRWLSAAQKARRVAGKPIPLLIQGESGVGKELFARATHDSGPRRDGPFVAINCAAVPENLIEAE
LFGYAPGAFTGARREGSAGRLREAHGGTLFLDEVGDMPLSMQTRLLRVLQERQVTPLGGGRPVDVDFALICATHRNLREA
ADKGSFRSDLYYRINGLTVHLPPLRERSDFGVLTERLLASFNPECDIRLAPDLLARLSRHAWPGNLRQYASMLRTASAML
DPHEECIDWQHLPDDIKEELAALTQPVTSPSAGGPSQNLDELSRAAIRQALESSCGNISQAARRLGISRQTLYRKLNA

Sequences:

>Translated_638_residues
MRTTSTALALRQARLHLLEHGDCPSAGIDDRLARSWRRSLAAGLSPTDRLADTEHASDGNLRRALAFNHDLLAHSLPVME
YLFEQVRHSQSMVVLADPRGTLINTLGDADFLDKAERAALTSGASWHEQHRGTNAIGTALAEGSGVEIHGSEHFLERNGF
LTCAAAPIMSASGELMGILDLSGGQRSRHPFALGLVSTAACMIENRLVISSCRQYIRLHLHAHFEGIGSVAEGIIALSDD
GWIVGANRKGLALLHLAWSDLGATPLARAIDVRLDELLSRHKRRPGQPTQVQLHDGTTLFVQVHAEPSGLVAAPASGTGK
VGATQPDALARLDTGDLRWLSAAQKARRVAGKPIPLLIQGESGVGKELFARATHDSGPRRDGPFVAINCAAVPENLIEAE
LFGYAPGAFTGARREGSAGRLREAHGGTLFLDEVGDMPLSMQTRLLRVLQERQVTPLGGGRPVDVDFALICATHRNLREA
ADKGSFRSDLYYRINGLTVHLPPLRERSDFGVLTERLLASFNPECDIRLAPDLLARLSRHAWPGNLRQYASMLRTASAML
DPHEECIDWQHLPDDIKEELAALTQPVTSPSAGGPSQNLDELSRAAIRQALESSCGNISQAARRLGISRQTLYRKLNA
>Mature_638_residues
MRTTSTALALRQARLHLLEHGDCPSAGIDDRLARSWRRSLAAGLSPTDRLADTEHASDGNLRRALAFNHDLLAHSLPVME
YLFEQVRHSQSMVVLADPRGTLINTLGDADFLDKAERAALTSGASWHEQHRGTNAIGTALAEGSGVEIHGSEHFLERNGF
LTCAAAPIMSASGELMGILDLSGGQRSRHPFALGLVSTAACMIENRLVISSCRQYIRLHLHAHFEGIGSVAEGIIALSDD
GWIVGANRKGLALLHLAWSDLGATPLARAIDVRLDELLSRHKRRPGQPTQVQLHDGTTLFVQVHAEPSGLVAAPASGTGK
VGATQPDALARLDTGDLRWLSAAQKARRVAGKPIPLLIQGESGVGKELFARATHDSGPRRDGPFVAINCAAVPENLIEAE
LFGYAPGAFTGARREGSAGRLREAHGGTLFLDEVGDMPLSMQTRLLRVLQERQVTPLGGGRPVDVDFALICATHRNLREA
ADKGSFRSDLYYRINGLTVHLPPLRERSDFGVLTERLLASFNPECDIRLAPDLLARLSRHAWPGNLRQYASMLRTASAML
DPHEECIDWQHLPDDIKEELAALTQPVTSPSAGGPSQNLDELSRAAIRQALESSCGNISQAARRLGISRQTLYRKLNA

Specific function: Required for sigma-54-dependent transcription of acoXABC [H]

COG id: COG3284

COG function: function code QK; Transcriptional activator of acetoin/glycerol metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 sigma-54 factor interaction domain [H]

Homologues:

Organism=Escherichia coli, GI1789233, Length=434, Percent_Identity=35.2534562211982, Blast_Score=236, Evalue=3e-63,
Organism=Escherichia coli, GI1790299, Length=322, Percent_Identity=43.167701863354, Blast_Score=219, Evalue=4e-58,
Organism=Escherichia coli, GI1788905, Length=301, Percent_Identity=41.8604651162791, Blast_Score=218, Evalue=9e-58,
Organism=Escherichia coli, GI1790437, Length=298, Percent_Identity=42.6174496644295, Blast_Score=210, Evalue=2e-55,
Organism=Escherichia coli, GI1786524, Length=299, Percent_Identity=43.8127090301003, Blast_Score=209, Evalue=4e-55,
Organism=Escherichia coli, GI1788550, Length=297, Percent_Identity=39.3939393939394, Blast_Score=206, Evalue=3e-54,
Organism=Escherichia coli, GI87082117, Length=332, Percent_Identity=38.855421686747, Blast_Score=198, Evalue=1e-51,
Organism=Escherichia coli, GI1787583, Length=324, Percent_Identity=37.962962962963, Blast_Score=194, Evalue=2e-50,
Organism=Escherichia coli, GI1789087, Length=308, Percent_Identity=37.3376623376623, Blast_Score=176, Evalue=5e-45,
Organism=Escherichia coli, GI87082152, Length=303, Percent_Identity=37.6237623762376, Blast_Score=168, Evalue=9e-43,
Organism=Escherichia coli, GI87081872, Length=220, Percent_Identity=40, Blast_Score=162, Evalue=6e-41,
Organism=Escherichia coli, GI87081858, Length=591, Percent_Identity=26.3959390862944, Blast_Score=142, Evalue=6e-35,
Organism=Escherichia coli, GI1789828, Length=305, Percent_Identity=35.0819672131148, Blast_Score=129, Evalue=4e-31,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR020441
- InterPro:   IPR009057
- InterPro:   IPR002197
- InterPro:   IPR002078 [H]

Pfam domain/function: PF02954 HTH_8; PF00158 Sigma54_activat [H]

EC number: NA

Molecular weight: Translated: 69050; Mature: 69050

Theoretical pI: Translated: 7.28; Mature: 7.28

Prosite motif: PS00675 SIGMA54_INTERACT_1 ; PS00676 SIGMA54_INTERACT_2 ; PS50045 SIGMA54_INTERACT_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTTSTALALRQARLHLLEHGDCPSAGIDDRLARSWRRSLAAGLSPTDRLADTEHASDGN
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCC
LRRALAFNHDLLAHSLPVMEYLFEQVRHSQSMVVLADPRGTLINTLGDADFLDKAERAAL
CHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCHHHHHHHHHHH
TSGASWHEQHRGTNAIGTALAEGSGVEIHGSEHFLERNGFLTCAAAPIMSASGELMGILD
HCCCCHHHHHCCCHHHHHHHCCCCCEEEECCHHHHHCCCEEEEECCHHHCCCCCEEEEEE
LSGGQRSRHPFALGLVSTAACMIENRLVISSCRQYIRLHLHAHFEGIGSVAEGIIALSDD
CCCCCCCCCCEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCC
GWIVGANRKGLALLHLAWSDLGATPLARAIDVRLDELLSRHKRRPGQPTQVQLHDGTTLF
CEEEECCCCCEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEE
VQVHAEPSGLVAAPASGTGKVGATQPDALARLDTGDLRWLSAAQKARRVAGKPIPLLIQG
EEEECCCCCEEECCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEC
ESGVGKELFARATHDSGPRRDGPFVAINCAAVPENLIEAELFGYAPGAFTGARREGSAGR
CCCCCHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
LREAHGGTLFLDEVGDMPLSMQTRLLRVLQERQVTPLGGGRPVDVDFALICATHRNLREA
CHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHH
ADKGSFRSDLYYRINGLTVHLPPLRERSDFGVLTERLLASFNPECDIRLAPDLLARLSRH
HHCCCCCCCEEEEEECEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEECHHHHHHHHHC
AWPGNLRQYASMLRTASAMLDPHEECIDWQHLPDDIKEELAALTQPVTSPSAGGPSQNLD
CCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHH
ELSRAAIRQALESSCGNISQAARRLGISRQTLYRKLNA
HHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHCC
>Mature Secondary Structure
MRTTSTALALRQARLHLLEHGDCPSAGIDDRLARSWRRSLAAGLSPTDRLADTEHASDGN
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCC
LRRALAFNHDLLAHSLPVMEYLFEQVRHSQSMVVLADPRGTLINTLGDADFLDKAERAAL
CHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCHHHHHHHHHHH
TSGASWHEQHRGTNAIGTALAEGSGVEIHGSEHFLERNGFLTCAAAPIMSASGELMGILD
HCCCCHHHHHCCCHHHHHHHCCCCCEEEECCHHHHHCCCEEEEECCHHHCCCCCEEEEEE
LSGGQRSRHPFALGLVSTAACMIENRLVISSCRQYIRLHLHAHFEGIGSVAEGIIALSDD
CCCCCCCCCCEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCC
GWIVGANRKGLALLHLAWSDLGATPLARAIDVRLDELLSRHKRRPGQPTQVQLHDGTTLF
CEEEECCCCCEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEE
VQVHAEPSGLVAAPASGTGKVGATQPDALARLDTGDLRWLSAAQKARRVAGKPIPLLIQG
EEEECCCCCEEECCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEC
ESGVGKELFARATHDSGPRRDGPFVAINCAAVPENLIEAELFGYAPGAFTGARREGSAGR
CCCCCHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
LREAHGGTLFLDEVGDMPLSMQTRLLRVLQERQVTPLGGGRPVDVDFALICATHRNLREA
CHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHH
ADKGSFRSDLYYRINGLTVHLPPLRERSDFGVLTERLLASFNPECDIRLAPDLLARLSRH
HHCCCCCCCEEEEEECEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEECHHHHHHHHHC
AWPGNLRQYASMLRTASAMLDPHEECIDWQHLPDDIKEELAALTQPVTSPSAGGPSQNLD
CCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHH
ELSRAAIRQALESSCGNISQAARRLGISRQTLYRKLNA
HHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1378052 [H]