Click here to switch to the map view.

The map label for this gene is ssb [H]

Identifier: 91790395

GI number: 91790395

Start: 4831124

End: 4831612

Strand: Reverse

Name: ssb [H]

Synonym: Bpro_4565

Alternate gene names: 91790395

Gene position: 4831612-4831124 (Counterclockwise)

Preceding gene: 91790396

Following gene: 91790394

Centisome position: 92.91

GC content: 65.85

Gene sequence:

>489_bases
ATGGCATCCGTCAACAAAGTCATCATCGTCGGCAATCTGGGGCGCGACCCCGAAATGCGCAGCTTTCCCAGCGGCGACCA
GGTGGCCAACGTCACCATCGCCACCACCGACAAGTGGAAGGACAAGCAGTCCGGCGAAATGAAAGAGGCCACCGAATGGC
ACCGCGTGGTGTTCAACGGCCGCCTTGCCGAAATCGTCGGCCAGTACCTGCGCAAGGGCTCGCAGGTCTACGTCGAGGGT
TCGCTGCGCACGCGCAAATGGACCGACAAGGACGGCCAGGAAAAGTACACCACCGAAATCCGTGCCGACCAGATGCAGAT
GCTGGGCAGCCGCCAGGGTATGGGCGGCCCCGGGGGCGACGATGGCGGCGGCTATGAGGCGCCGGCCCGTCCCGCTGCTC
GGGCACCCGCTGCCGCGCCGCGGCAGGCTCCCGCGCCGACCAAGGCGGCCAGCGGCTTCGACGACATGGATGACGACATT
CCGTTTTGA

Upstream 100 bases:

>100_bases
CGAGAGTGTACTATTTACGGATAACTTCTAAGCGATTCGACTCGAGCCCTCGTGCTGGCCAGCCAGTTAAACTCTGACAG
ATAGATCAGGAGAACACGTC

Downstream 100 bases:

>100_bases
GGCATCGGCTACCGGCCTTGAGAATCCTCTAAAAGCCCGCTTTGGCGGGCTTTGTTGATGCTGGGGCGCTCTTGAATAAA
TAGCTGAATCTGGCTGTTTT

Product: single-strand-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MASVNKVIIVGNLGRDPEMRSFPSGDQVANVTIATTDKWKDKQSGEMKEATEWHRVVFNGRLAEIVGQYLRKGSQVYVEG
SLRTRKWTDKDGQEKYTTEIRADQMQMLGSRQGMGGPGGDDGGGYEAPARPAARAPAAAPRQAPAPTKAASGFDDMDDDI
PF

Sequences:

>Translated_162_residues
MASVNKVIIVGNLGRDPEMRSFPSGDQVANVTIATTDKWKDKQSGEMKEATEWHRVVFNGRLAEIVGQYLRKGSQVYVEG
SLRTRKWTDKDGQEKYTTEIRADQMQMLGSRQGMGGPGGDDGGGYEAPARPAARAPAAAPRQAPAPTKAASGFDDMDDDI
PF
>Mature_161_residues
ASVNKVIIVGNLGRDPEMRSFPSGDQVANVTIATTDKWKDKQSGEMKEATEWHRVVFNGRLAEIVGQYLRKGSQVYVEGS
LRTRKWTDKDGQEKYTTEIRADQMQMLGSRQGMGGPGGDDGGGYEAPARPAARAPAAAPRQAPAPTKAASGFDDMDDDIP
F

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=113, Percent_Identity=31.858407079646, Blast_Score=69, Evalue=2e-12,
Organism=Escherichia coli, GI1790494, Length=189, Percent_Identity=51.3227513227513, Blast_Score=172, Evalue=1e-44,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 17590; Mature: 17459

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASVNKVIIVGNLGRDPEMRSFPSGDQVANVTIATTDKWKDKQSGEMKEATEWHRVVFNG
CCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCC
RLAEIVGQYLRKGSQVYVEGSLRTRKWTDKDGQEKYTTEIRADQMQMLGSRQGMGGPGGD
HHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
DGGGYEAPARPAARAPAAAPRQAPAPTKAASGFDDMDDDIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASVNKVIIVGNLGRDPEMRSFPSGDQVANVTIATTDKWKDKQSGEMKEATEWHRVVFNG
CCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCC
RLAEIVGQYLRKGSQVYVEGSLRTRKWTDKDGQEKYTTEIRADQMQMLGSRQGMGGPGGD
HHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
DGGGYEAPARPAARAPAAAPRQAPAPTKAASGFDDMDDDIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12948488 [H]