| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is mipA [C]
Identifier: 91790394
GI number: 91790394
Start: 4829395
End: 4830888
Strand: Reverse
Name: mipA [C]
Synonym: Bpro_4564
Alternate gene names: 91790394
Gene position: 4830888-4829395 (Counterclockwise)
Preceding gene: 91790395
Following gene: 91790390
Centisome position: 92.9
GC content: 62.32
Gene sequence:
>1494_bases ATGAATTTCAAGGTCAGTCAGGGTCGGTCAAGGTCAGCTTGCTGCTTTGAAGCTTGGGCATCAAAAAATCTTCAAAAAAC AAGATCAACGATGAAAAGCATCTTACTTTCGCGCAGTTTTTGGGGCACGGCTTTGGTGGCGGCTGGTTTGTTGGCCATGA TGCCCGTCCGTGCGGCCCCTGACCTGGAGCCGCTGACGAATATCCTGTCGACCCCCGGCAGCGCCGGGCTCGGCCTGGTC ACACGCGTCGAGCGCTCACCCTACCGGGACGGCGGCACCCGCTACGACTTGTTGCCGCTTTATCTGTACGAGGGCGAGCG GCTGTTTCTGCATGCCAACCGGGTCGGCGTGAAAATGCTCAACGGCAGTGAGCAGCGGCTGGACCTGTTTGTGGAGCAGC GCCTGGAGGGCTTCCCGGCTAATCGTCTGCCCGCCGGGCTGGCAGGCATGGCGAACCGCGACTCCGGCCTGGACGGCGGC CTGTCTTACCGCTACAGCCAACCCTGGGGCGCGCTGCAGGCCGAGCTGCTGCATGACATCGGCAACACCTCCAAGGGTAG CGAGTTTCGCCTGAGCTACACCTATGACTGGCGCTCCGGGCCCTGGATGCTGCGTCCCAGCGTGACCGTGGCGCTGCGTG ATGCCAAGCTCAACAATTATTACTACGGCGTGCGGGCCAGTGAGGCCACGCCTGACCGCCCAGCCTATTCGCCGGGTGCC GGCATCAACACCTCGATGGGCCTGTATGGTTCCTACGATGTGTCGCAGCGCTGGCGCCTGCTGGCTGGTGTGTCCGCCAC GGTGCTGAGCGGCAAGATCAAGGACAGCCCCATTGTGCAGAAAAGTGCGCTGCCCGCCGTCTATGTGGGCGCAGCCTATG ACTTCGGCGGCCACAAGCGTGAGTGGGCCGAAGACGGCTCGCCCACGTATTTCAAGCTGCTCTATGGCAAATCAACGGAA GACGGCTGCCACCTGATCAAGATACTCACGGCACGCTGCCTGTCAACGGCCACCACCAACGCGACCACCATTACCGGCAT TCAGGTCGGCAAGCCCTTCATCCGGAACGTCAATGGCTGGCCGCTTGATTTTGTCGGCTATGTGGGCCTGACGCAGCACA ACGAGCGCGGACTGCAGGCCAACGGGGCACAACTGGACCTCTTCATGAAAGCCGTCTACTCCGGCTTTCCGTGGAGCCAC CGGGTCAAGACGCGGCTGGGGCTGGGCGTGGGCCTGTCCGCGGCGCAACGGGCGCCTTATATCGAGGCGTCCAGCCAGGC CGCTGGCGGGAGAACGGCTTCGCGCCTGCTCAATTACCTGGACCCGACGATTGATGTGAGCCTGGGCGACCTGCTGGGCT CGCGCATGCTGAAAGATACCTATATCGGTTTCGGCGTGTCGCACCGCTCCGGCATTTTTGGCGCGTCACGCCTGCTGGGC AGCGTCAACGGCGGCTCCAACTACATCTACACCTATGTCGAGACGGCGCTTTGA
Upstream 100 bases:
>100_bases GCGCAGCGGGGCAATGCGGGATGCTGGCTTGGGCATGGATGGCGCGTTTCCTTACAAGCGCGGCGCGCTGCCAGGGCTGT TCGCCGATAGCATGTAGGCA
Downstream 100 bases:
>100_bases GAGCGGCCTGGTATCTGAAGCAATAGTCAGTGGTCAGTAGTGAGGAGTGAGCAGCGGTTGGGGAACGTCATGGCTGGGGC GCAAGATGCCATCGAGTTGA
Product: MltA-interacting MipA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 497; Mature: 497
Protein sequence:
>497_residues MNFKVSQGRSRSACCFEAWASKNLQKTRSTMKSILLSRSFWGTALVAAGLLAMMPVRAAPDLEPLTNILSTPGSAGLGLV TRVERSPYRDGGTRYDLLPLYLYEGERLFLHANRVGVKMLNGSEQRLDLFVEQRLEGFPANRLPAGLAGMANRDSGLDGG LSYRYSQPWGALQAELLHDIGNTSKGSEFRLSYTYDWRSGPWMLRPSVTVALRDAKLNNYYYGVRASEATPDRPAYSPGA GINTSMGLYGSYDVSQRWRLLAGVSATVLSGKIKDSPIVQKSALPAVYVGAAYDFGGHKREWAEDGSPTYFKLLYGKSTE DGCHLIKILTARCLSTATTNATTITGIQVGKPFIRNVNGWPLDFVGYVGLTQHNERGLQANGAQLDLFMKAVYSGFPWSH RVKTRLGLGVGLSAAQRAPYIEASSQAAGGRTASRLLNYLDPTIDVSLGDLLGSRMLKDTYIGFGVSHRSGIFGASRLLG SVNGGSNYIYTYVETAL
Sequences:
>Translated_497_residues MNFKVSQGRSRSACCFEAWASKNLQKTRSTMKSILLSRSFWGTALVAAGLLAMMPVRAAPDLEPLTNILSTPGSAGLGLV TRVERSPYRDGGTRYDLLPLYLYEGERLFLHANRVGVKMLNGSEQRLDLFVEQRLEGFPANRLPAGLAGMANRDSGLDGG LSYRYSQPWGALQAELLHDIGNTSKGSEFRLSYTYDWRSGPWMLRPSVTVALRDAKLNNYYYGVRASEATPDRPAYSPGA GINTSMGLYGSYDVSQRWRLLAGVSATVLSGKIKDSPIVQKSALPAVYVGAAYDFGGHKREWAEDGSPTYFKLLYGKSTE DGCHLIKILTARCLSTATTNATTITGIQVGKPFIRNVNGWPLDFVGYVGLTQHNERGLQANGAQLDLFMKAVYSGFPWSH RVKTRLGLGVGLSAAQRAPYIEASSQAAGGRTASRLLNYLDPTIDVSLGDLLGSRMLKDTYIGFGVSHRSGIFGASRLLG SVNGGSNYIYTYVETAL >Mature_497_residues MNFKVSQGRSRSACCFEAWASKNLQKTRSTMKSILLSRSFWGTALVAAGLLAMMPVRAAPDLEPLTNILSTPGSAGLGLV TRVERSPYRDGGTRYDLLPLYLYEGERLFLHANRVGVKMLNGSEQRLDLFVEQRLEGFPANRLPAGLAGMANRDSGLDGG LSYRYSQPWGALQAELLHDIGNTSKGSEFRLSYTYDWRSGPWMLRPSVTVALRDAKLNNYYYGVRASEATPDRPAYSPGA GINTSMGLYGSYDVSQRWRLLAGVSATVLSGKIKDSPIVQKSALPAVYVGAAYDFGGHKREWAEDGSPTYFKLLYGKSTE DGCHLIKILTARCLSTATTNATTITGIQVGKPFIRNVNGWPLDFVGYVGLTQHNERGLQANGAQLDLFMKAVYSGFPWSH RVKTRLGLGVGLSAAQRAPYIEASSQAAGGRTASRLLNYLDPTIDVSLGDLLGSRMLKDTYIGFGVSHRSGIFGASRLLG SVNGGSNYIYTYVETAL
Specific function: May Serve As A Scaffold Protein Required For The Formation Of A Complex With Mrcb/Ponb And Mlta, This Complex Could Play A Role In Enlargement And Septation Of The Murein Sacculus. [C]
COG id: COG3713
COG function: function code M; Outer membrane protein V
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mipA/ompV family [H]
Homologues:
Organism=Escherichia coli, GI1788082, Length=230, Percent_Identity=25.6521739130435, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1790010, Length=228, Percent_Identity=23.2456140350877, Blast_Score=69, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010583 [H]
Pfam domain/function: PF06629 MipA [H]
EC number: NA
Molecular weight: Translated: 54089; Mature: 54089
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFKVSQGRSRSACCFEAWASKNLQKTRSTMKSILLSRSFWGTALVAAGLLAMMPVRAAP CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCC DLEPLTNILSTPGSAGLGLVTRVERSPYRDGGTRYDLLPLYLYEGERLFLHANRVGVKML CHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCEEEEEEEEEECCCEEEEEECCCEEEEE NGSEQRLDLFVEQRLEGFPANRLPAGLAGMANRDSGLDGGLSYRYSQPWGALQAELLHDI CCCHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHH GNTSKGSEFRLSYTYDWRSGPWMLRPSVTVALRDAKLNNYYYGVRASEATPDRPAYSPGA CCCCCCCEEEEEEEEECCCCCEEECCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCC GINTSMGLYGSYDVSQRWRLLAGVSATVLSGKIKDSPIVQKSALPAVYVGAAYDFGGHKR CCCCCCCCCCCCCHHHHHHHHHCCEEHEEECCCCCCCCCHHHCCCEEEEEEEECCCCCCC EWAEDGSPTYFKLLYGKSTEDGCHLIKILTARCLSTATTNATTITGIQVGKPFIRNVNGW HHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHCCCCC PLDFVGYVGLTQHNERGLQANGAQLDLFMKAVYSGFPWSHRVKTRLGLGVGLSAAQRAPY CCHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHCCCC IEASSQAAGGRTASRLLNYLDPTIDVSLGDLLGSRMLKDTYIGFGVSHRSGIFGASRLLG EECCCCCCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHC SVNGGSNYIYTYVETAL CCCCCCCEEEEEEEECC >Mature Secondary Structure MNFKVSQGRSRSACCFEAWASKNLQKTRSTMKSILLSRSFWGTALVAAGLLAMMPVRAAP CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCC DLEPLTNILSTPGSAGLGLVTRVERSPYRDGGTRYDLLPLYLYEGERLFLHANRVGVKML CHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCEEEEEEEEEECCCEEEEEECCCEEEEE NGSEQRLDLFVEQRLEGFPANRLPAGLAGMANRDSGLDGGLSYRYSQPWGALQAELLHDI CCCHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHH GNTSKGSEFRLSYTYDWRSGPWMLRPSVTVALRDAKLNNYYYGVRASEATPDRPAYSPGA CCCCCCCEEEEEEEEECCCCCEEECCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCC GINTSMGLYGSYDVSQRWRLLAGVSATVLSGKIKDSPIVQKSALPAVYVGAAYDFGGHKR CCCCCCCCCCCCCHHHHHHHHHCCEEHEEECCCCCCCCCHHHCCCEEEEEEEECCCCCCC EWAEDGSPTYFKLLYGKSTEDGCHLIKILTARCLSTATTNATTITGIQVGKPFIRNVNGW HHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHCCCCC PLDFVGYVGLTQHNERGLQANGAQLDLFMKAVYSGFPWSHRVKTRLGLGVGLSAAQRAPY CCHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHCCCC IEASSQAAGGRTASRLLNYLDPTIDVSLGDLLGSRMLKDTYIGFGVSHRSGIFGASRLLG EECCCCCCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHC SVNGGSNYIYTYVETAL CCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA