| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91790383
Identifier: 91790383
GI number: 91790383
Start: 4816529
End: 4817554
Strand: Direct
Name: 91790383
Synonym: Bpro_4553
Alternate gene names: NA
Gene position: 4816529-4817554 (Clockwise)
Preceding gene: 91790381
Following gene: 91790384
Centisome position: 92.62
GC content: 60.33
Gene sequence:
>1026_bases ATGCCGCATCCACACATCGCCCTGCCCCTCTCATTGACGCCTTCCAGGCAATCAATGCCCTTCACGCCCTGGTTGACCGG GCTTTCCATGGCGCTTCTCGCCACGGCTTCCGGCCAGGTGCTGGCACAAGCCTGGCCCGAAAAAACCGTCACCATTGTGG TGCCCACCGCCGCCGGTGGCGCCAATGACGCGATGGCGCGCATCATTGGACAAGGCCTCAGCACACGGCTTGGAAAAGCT GTCATTGTTGAAAACAAGGCCGGCGCCAACGGCGCCATTGCCAGCGAATTTGTGGCACGCGCCGCGCCCGATGGCTACAC CATCATGTTTGGCTATATCGCCACCCACGGCATCAACCCGGCGCTGCAAAAACTCAAGTACGACCCGGTGACGGATTTCG AGCCGATCGGCATGGTGGCTGCTTCGCCGACCGTGCTGGTCGCTCACAATGGAGTCGCCGCCAAGAACGTCAAGGAACTG GTGCAACTGATCAAGGCCAAGCCGGGCACCTTCAGTTATGCCTCGGCCGGCAACGGCACCGCACCGCACATCGCCGGTGA GCTGTTCAAACTGTCGGCCGGGCTGGACGTGGTGAGCGTTCCTTACAAGGGCTCGGCCCCCGCCGTGGTGGACACCATTG CGGGCAACACGCAGTTCATGTTCCCCAGCCTGTTCACGGCCTACCCGCAAGTCAAGGGCGGCAAACTCAAGGCACTGGGT ATTGCAGGCGACAAGCGCTCGGCCATATTGCCCGATGTGCCCACACTGGCCGAACAGGGCATAGCCAATGTCAGCATGTC ACAGTGGTACGCCATGTTCGCACCCGCAAAAACGCCCAAGGCCGTGATCGACCGGCTCAACCGCGAAATGAACAGTGTTC TGGCCGACAAGGCGGTTCAGAAAAAAATCGAGGACCAGGGCGCTGAAGTCGAAACCGGCACACCCGAGCAGTTGAAAACC CTGGTGCAGAAAGAAGTTGCGCGCTGGAAAGGCGTTGTCGCAGCAGCCAAAATCAAAGTCGAATAA
Upstream 100 bases:
>100_bases TAGCAAAAATTGCAATTTACACGCAAGCAGGATAACCGGATGATTAAGTCCAAAGCACGGGTCAACCTCCTGACCCGAAG CCCAACCGAAGGAGACTCAC
Downstream 100 bases:
>100_bases GCGGTAGATCAGAAAGATCACGCAGGGAATTTTCATGAACTTGCAAAACTGGATTGGCCGCAGCGAAACGGTGGAAGACA TCGCCACCGCCACACCTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MPHPHIALPLSLTPSRQSMPFTPWLTGLSMALLATASGQVLAQAWPEKTVTIVVPTAAGGANDAMARIIGQGLSTRLGKA VIVENKAGANGAIASEFVARAAPDGYTIMFGYIATHGINPALQKLKYDPVTDFEPIGMVAASPTVLVAHNGVAAKNVKEL VQLIKAKPGTFSYASAGNGTAPHIAGELFKLSAGLDVVSVPYKGSAPAVVDTIAGNTQFMFPSLFTAYPQVKGGKLKALG IAGDKRSAILPDVPTLAEQGIANVSMSQWYAMFAPAKTPKAVIDRLNREMNSVLADKAVQKKIEDQGAEVETGTPEQLKT LVQKEVARWKGVVAAAKIKVE
Sequences:
>Translated_341_residues MPHPHIALPLSLTPSRQSMPFTPWLTGLSMALLATASGQVLAQAWPEKTVTIVVPTAAGGANDAMARIIGQGLSTRLGKA VIVENKAGANGAIASEFVARAAPDGYTIMFGYIATHGINPALQKLKYDPVTDFEPIGMVAASPTVLVAHNGVAAKNVKEL VQLIKAKPGTFSYASAGNGTAPHIAGELFKLSAGLDVVSVPYKGSAPAVVDTIAGNTQFMFPSLFTAYPQVKGGKLKALG IAGDKRSAILPDVPTLAEQGIANVSMSQWYAMFAPAKTPKAVIDRLNREMNSVLADKAVQKKIEDQGAEVETGTPEQLKT LVQKEVARWKGVVAAAKIKVE >Mature_340_residues PHPHIALPLSLTPSRQSMPFTPWLTGLSMALLATASGQVLAQAWPEKTVTIVVPTAAGGANDAMARIIGQGLSTRLGKAV IVENKAGANGAIASEFVARAAPDGYTIMFGYIATHGINPALQKLKYDPVTDFEPIGMVAASPTVLVAHNGVAAKNVKELV QLIKAKPGTFSYASAGNGTAPHIAGELFKLSAGLDVVSVPYKGSAPAVVDTIAGNTQFMFPSLFTAYPQVKGGKLKALGI AGDKRSAILPDVPTLAEQGIANVSMSQWYAMFAPAKTPKAVIDRLNREMNSVLADKAVQKKIEDQGAEVETGTPEQLKTL VQKEVARWKGVVAAAKIKVE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 35703; Mature: 35572
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHPHIALPLSLTPSRQSMPFTPWLTGLSMALLATASGQVLAQAWPEKTVTIVVPTAAGG CCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEEEECCCCC ANDAMARIIGQGLSTRLGKAVIVENKAGANGAIASEFVARAAPDGYTIMFGYIATHGINP CHHHHHHHHHCCHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEEHHHCCCCH ALQKLKYDPVTDFEPIGMVAASPTVLVAHNGVAAKNVKELVQLIKAKPGTFSYASAGNGT HHHHCCCCCCCCCCCCCEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEECCCCCCC APHIAGELFKLSAGLDVVSVPYKGSAPAVVDTIAGNTQFMFPSLFTAYPQVKGGKLKALG CCHHHHHHHHHHCCCCEEECCCCCCCCCEEHHHCCCCEEECHHHHHHCCCCCCCEEEEEE IAGDKRSAILPDVPTLAEQGIANVSMSQWYAMFAPAKTPKAVIDRLNREMNSVLADKAVQ ECCCCCCCCCCCCHHHHHHCCCCCCHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHH KKIEDQGAEVETGTPEQLKTLVQKEVARWKGVVAAAKIKVE HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEEEEEEC >Mature Secondary Structure PHPHIALPLSLTPSRQSMPFTPWLTGLSMALLATASGQVLAQAWPEKTVTIVVPTAAGG CCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEEEECCCCC ANDAMARIIGQGLSTRLGKAVIVENKAGANGAIASEFVARAAPDGYTIMFGYIATHGINP CHHHHHHHHHCCHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEEHHHCCCCH ALQKLKYDPVTDFEPIGMVAASPTVLVAHNGVAAKNVKELVQLIKAKPGTFSYASAGNGT HHHHCCCCCCCCCCCCCEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEECCCCCCC APHIAGELFKLSAGLDVVSVPYKGSAPAVVDTIAGNTQFMFPSLFTAYPQVKGGKLKALG CCHHHHHHHHHHCCCCEEECCCCCCCCCEEHHHCCCCEEECHHHHHHCCCCCCCEEEEEE IAGDKRSAILPDVPTLAEQGIANVSMSQWYAMFAPAKTPKAVIDRLNREMNSVLADKAVQ ECCCCCCCCCCCCHHHHHHCCCCCCHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHH KKIEDQGAEVETGTPEQLKTLVQKEVARWKGVVAAAKIKVE HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]