| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is ccrA [H]
Identifier: 91790366
GI number: 91790366
Start: 4795385
End: 4796344
Strand: Direct
Name: ccrA [H]
Synonym: Bpro_4534
Alternate gene names: 91790366
Gene position: 4795385-4796344 (Clockwise)
Preceding gene: 91790364
Following gene: 91790367
Centisome position: 92.21
GC content: 65.31
Gene sequence:
>960_bases ATGAGCAGCCCCAAGAAATTCGCCTCCCAAGCCGACCTCGACGAGAAACAGGTCACCTTCACCAGGCTTTCGGACAACGC CTATGCCTATACGGCCGAAGGCGACCCCAACACCGGCATCGTCATCGGCGACGACTGCGTGCTGGTGGCCGACACCCAGG CCACACCGGCCATGGCGGCCGACGTGGTGCGCCGCATCCGCGAGGTGACCGACAAGCCCATCAAGTACGTGGTACTGACG CATTACCACGCGGTGCGTGTGCTGGGCGCCAGCGGCTACCAGCCCGAGCACATCCTGGCCAGCCAGGACACCTACGAGCT GATCGTCGAACGCGGCGAGCAGGACAAGGCCAGCGAGATCGGCCGCTTCCCGCGCCTGTTCCGCGATGTGGAATCAGTGC CGCCCGGCCTGACCTGGCCGACCCTGACGTTCACCGGAAAAATGACGCTGTGGCTGGGCCAGCTCGAAGTGCAACTGATC CAGCTCGGGCGCGGCCACACCAAGGGGGACACAGTGGTCTGGCTGCCCAAGGACAAGATCCTGTTTTCGGGCGACCTGGT CGAGTTCGACGCGACGCCCTATGCCGGCGACGCCTACTTCAAGGACTGGCCGAAGACGCTGGACAAGCTGGCGGCGCTCA AGCCGGCGGCACTGGTGCCCGGCCGCGGCGCGGCGCTCACTACCCCCGAGGAAGTGCAGAAGGGTCTGGCCGGCACGCGC GATTTCATTGCCGACGTGTACGCCAGCGTCCAGGCCGGCGTGAAAGCCGGGAAGGACCTCAACGCGGTCTACAAGGAAAC CTACGCCAGGCTCAAGCCCAAGTACGGCCACTGGGTGATCTTTGACCACTGCATGCCCTTCGACGTGACCCGCTGCTACG ACGAGGCGACACAGTACCCCGACCCGCGCATCTGGACGGCCGAGCGCGACCAGCAGATGTGGGAAACGCTGGAAGGTTGA
Upstream 100 bases:
>100_bases TTTCACAAATGGATTTGACAATAGCAAACTTTTGCATAAAATTAACAAATTGATTTGCAATGGACAAACTCTAATCCTGC CCGCCAACTCCGGAGATCTC
Downstream 100 bases:
>100_bases CCCCCTGAGGAGACAAAGATGAAACTGCAAGAACTGCAAGAACTTCCAAACACCCGGGGTCGCGGCGTTGATTACCAGAA GCTGGCGTTCGACTTTGAGC
Product: beta-lactamase-like protein
Products: NA
Alternate protein names: Cephalosporinase; Imipenem-cefoxitin hydrolyzing enzyme; Penicillinase [H]
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MSSPKKFASQADLDEKQVTFTRLSDNAYAYTAEGDPNTGIVIGDDCVLVADTQATPAMAADVVRRIREVTDKPIKYVVLT HYHAVRVLGASGYQPEHILASQDTYELIVERGEQDKASEIGRFPRLFRDVESVPPGLTWPTLTFTGKMTLWLGQLEVQLI QLGRGHTKGDTVVWLPKDKILFSGDLVEFDATPYAGDAYFKDWPKTLDKLAALKPAALVPGRGAALTTPEEVQKGLAGTR DFIADVYASVQAGVKAGKDLNAVYKETYARLKPKYGHWVIFDHCMPFDVTRCYDEATQYPDPRIWTAERDQQMWETLEG
Sequences:
>Translated_319_residues MSSPKKFASQADLDEKQVTFTRLSDNAYAYTAEGDPNTGIVIGDDCVLVADTQATPAMAADVVRRIREVTDKPIKYVVLT HYHAVRVLGASGYQPEHILASQDTYELIVERGEQDKASEIGRFPRLFRDVESVPPGLTWPTLTFTGKMTLWLGQLEVQLI QLGRGHTKGDTVVWLPKDKILFSGDLVEFDATPYAGDAYFKDWPKTLDKLAALKPAALVPGRGAALTTPEEVQKGLAGTR DFIADVYASVQAGVKAGKDLNAVYKETYARLKPKYGHWVIFDHCMPFDVTRCYDEATQYPDPRIWTAERDQQMWETLEG >Mature_318_residues SSPKKFASQADLDEKQVTFTRLSDNAYAYTAEGDPNTGIVIGDDCVLVADTQATPAMAADVVRRIREVTDKPIKYVVLTH YHAVRVLGASGYQPEHILASQDTYELIVERGEQDKASEIGRFPRLFRDVESVPPGLTWPTLTFTGKMTLWLGQLEVQLIQ LGRGHTKGDTVVWLPKDKILFSGDLVEFDATPYAGDAYFKDWPKTLDKLAALKPAALVPGRGAALTTPEEVQKGLAGTRD FIADVYASVQAGVKAGKDLNAVYKETYARLKPKYGHWVIFDHCMPFDVTRCYDEATQYPDPRIWTAERDQQMWETLEG
Specific function: Can hydrolyze carbapenem compounds [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001018 - InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.5.2.6 [H]
Molecular weight: Translated: 35566; Mature: 35434
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPKKFASQADLDEKQVTFTRLSDNAYAYTAEGDPNTGIVIGDDCVLVADTQATPAMAA CCCCHHHHHHCCCCCCEEEEEEECCCEEEEEECCCCCCCEEECCCEEEEECCCCCHHHHH DVVRRIREVTDKPIKYVVLTHYHAVRVLGASGYQPEHILASQDTYELIVERGEQDKASEI HHHHHHHHHCCCCEEEEEEEEEEEEEEECCCCCCCCEEECCCCHHHHHHHCCCCCHHHHH GRFPRLFRDVESVPPGLTWPTLTFTGKMTLWLGQLEVQLIQLGRGHTKGDTVVWLPKDKI HHHHHHHHHHHHCCCCCCCCEEEEECEEEEEEHHHHHHHHHHCCCCCCCCEEEEECCCCE LFSGDLVEFDATPYAGDAYFKDWPKTLDKLAALKPAALVPGRGAALTTPEEVQKGLAGTR EEECCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCHH DFIADVYASVQAGVKAGKDLNAVYKETYARLKPKYGHWVIFDHCMPFDVTRCYDEATQYP HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCC DPRIWTAERDQQMWETLEG CCCEECCHHHHHHHHHHCC >Mature Secondary Structure SSPKKFASQADLDEKQVTFTRLSDNAYAYTAEGDPNTGIVIGDDCVLVADTQATPAMAA CCCHHHHHHCCCCCCEEEEEEECCCEEEEEECCCCCCCEEECCCEEEEECCCCCHHHHH DVVRRIREVTDKPIKYVVLTHYHAVRVLGASGYQPEHILASQDTYELIVERGEQDKASEI HHHHHHHHHCCCCEEEEEEEEEEEEEEECCCCCCCCEEECCCCHHHHHHHCCCCCHHHHH GRFPRLFRDVESVPPGLTWPTLTFTGKMTLWLGQLEVQLIQLGRGHTKGDTVVWLPKDKI HHHHHHHHHHHHCCCCCCCCEEEEECEEEEEEHHHHHHHHHHCCCCCCCCEEEEECCCCE LFSGDLVEFDATPYAGDAYFKDWPKTLDKLAALKPAALVPGRGAALTTPEEVQKGLAGTR EEECCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCHH DFIADVYASVQAGVKAGKDLNAVYKETYARLKPKYGHWVIFDHCMPFDVTRCYDEATQYP HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCC DPRIWTAERDQQMWETLEG CCCEECCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2121094; 1956298; 2110145; 8805566; 9416622; 9578564; 10210203 [H]