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The map label for this gene is nahR [H]

Identifier: 91790340

GI number: 91790340

Start: 4762683

End: 4763603

Strand: Direct

Name: nahR [H]

Synonym: Bpro_4508

Alternate gene names: 91790340

Gene position: 4762683-4763603 (Clockwise)

Preceding gene: 91790326

Following gene: 91790341

Centisome position: 91.59

GC content: 65.91

Gene sequence:

>921_bases
ATGAGCAAAGATCTCGAACTTCTGGACATCAGGCTGCTGCGGTTGCTGGACCAGCTGTATGCCACCCACAGCGTCACGCG
TGCCGCCGAAGCGCTGGGGCAAAGCCAGCCCACGGTCAGCATCTGGCTGGCCCGGCTGCGCAAGCAGCTGAACGACCCGC
TGTTTGTGCGCACGGCCGAAGGCATGCTGCCGACGCCGCGCACCGATGCGCTGATGGGCACAGTGCGCGAGGTGCTGGCC
GGCTTGAAGCGGCTGTCCGAGTCGGGCACCGCATTTGACCCGGCCACGGTGCAGCGGCGCTTCTCCATCTGCATGACGGA
CGCCAGCCACATCACCCTGTTGCCGCGGCTGCTGGCGCATGTGCGGGCACTCGCACCCGGTGTGGCGCTGGAGGCGAGTC
GTATTGATACCAACCTGGCGCACGCCCTGCAGGCGGGCGAGGCCCACCTGGCCGTGGGGTTTCTGCCCTGGCTGGACGCC
GGCTTTTACCAGCAGACCCTGTACGCGCAGGACTGGATTTGCCTGGCCAATGCACAGCATCCGCGTGTCATCGACGAAAC
CCGGGCGAACTGGAACCTCGCGGTGTATCAGGCCGAAGCGCACATCGGCATCAGTTCCGGCACGGGCTACCAGCTGCTCG
ACAACACCGTGGCGTCACAGCGCATCACACGCCAGATACGGCTGGAGCTGCCCGGTTTTCTGGGCCTGTCGGCCATTCTC
TCGACCAGCGACCTGATCGCCACCCTGCCCCGCCACATCGGCGAAACCCTGGCCCACGCCGCCGGACTGCGCGTGCTGCC
CTGTCCGTTCGAGATTCCGGGCTTCACCGTCAAGCAATACTGGCATGCCCGGTACCACCACGACGCAGCCTGCCGCTGGC
TGCGCGGCGTCTGCGCCGAATTGTTCATGAAAAATGCCTGA

Upstream 100 bases:

>100_bases
CCGCGACTCCTTCTTGATCCAGGCGTGAATTCTGGACAGACCCATCCATGTTGTCCATGCAGTAGCACCAATAGATTCCA
TTACGCATCACAATAAAGGT

Downstream 100 bases:

>100_bases
CCCCAGACAATGCGGGTGTAAGCGGCTATTTCAAAAAATGCGATGACAAAAAGTCGGGTGAAATACAGGCAATGATGGCG
CACGCGTCCATGCCATCGGG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MSKDLELLDIRLLRLLDQLYATHSVTRAAEALGQSQPTVSIWLARLRKQLNDPLFVRTAEGMLPTPRTDALMGTVREVLA
GLKRLSESGTAFDPATVQRRFSICMTDASHITLLPRLLAHVRALAPGVALEASRIDTNLAHALQAGEAHLAVGFLPWLDA
GFYQQTLYAQDWICLANAQHPRVIDETRANWNLAVYQAEAHIGISSGTGYQLLDNTVASQRITRQIRLELPGFLGLSAIL
STSDLIATLPRHIGETLAHAAGLRVLPCPFEIPGFTVKQYWHARYHHDAACRWLRGVCAELFMKNA

Sequences:

>Translated_306_residues
MSKDLELLDIRLLRLLDQLYATHSVTRAAEALGQSQPTVSIWLARLRKQLNDPLFVRTAEGMLPTPRTDALMGTVREVLA
GLKRLSESGTAFDPATVQRRFSICMTDASHITLLPRLLAHVRALAPGVALEASRIDTNLAHALQAGEAHLAVGFLPWLDA
GFYQQTLYAQDWICLANAQHPRVIDETRANWNLAVYQAEAHIGISSGTGYQLLDNTVASQRITRQIRLELPGFLGLSAIL
STSDLIATLPRHIGETLAHAAGLRVLPCPFEIPGFTVKQYWHARYHHDAACRWLRGVCAELFMKNA
>Mature_305_residues
SKDLELLDIRLLRLLDQLYATHSVTRAAEALGQSQPTVSIWLARLRKQLNDPLFVRTAEGMLPTPRTDALMGTVREVLAG
LKRLSESGTAFDPATVQRRFSICMTDASHITLLPRLLAHVRALAPGVALEASRIDTNLAHALQAGEAHLAVGFLPWLDAG
FYQQTLYAQDWICLANAQHPRVIDETRANWNLAVYQAEAHIGISSGTGYQLLDNTVASQRITRQIRLELPGFLGLSAILS
TSDLIATLPRHIGETLAHAAGLRVLPCPFEIPGFTVKQYWHARYHHDAACRWLRGVCAELFMKNA

Specific function: Regulates the expression of the naphthalene (nahA-F) and salicylate (nahG-M) metabolism genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081684, Length=299, Percent_Identity=27.4247491638796, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1786820, Length=283, Percent_Identity=22.6148409893993, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI1790147, Length=305, Percent_Identity=25.5737704918033, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: 825 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33869; Mature: 33737

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: PS00334 MYB_2 ; PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKDLELLDIRLLRLLDQLYATHSVTRAAEALGQSQPTVSIWLARLRKQLNDPLFVRTAE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECC
GMLPTPRTDALMGTVREVLAGLKRLSESGTAFDPATVQRRFSICMTDASHITLLPRLLAH
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
VRALAPGVALEASRIDTNLAHALQAGEAHLAVGFLPWLDAGFYQQTLYAQDWICLANAQH
HHHHCCCCEEEHHHHHHHHHHHHHCCCCCEEEEHHHHHCCHHHHHHHHHCCEEEEECCCC
PRVIDETRANWNLAVYQAEAHIGISSGTGYQLLDNTVASQRITRQIRLELPGFLGLSAIL
CCCHHHCCCCCEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
STSDLIATLPRHIGETLAHAAGLRVLPCPFEIPGFTVKQYWHARYHHDAACRWLRGVCAE
HHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LFMKNA
HHHCCC
>Mature Secondary Structure 
SKDLELLDIRLLRLLDQLYATHSVTRAAEALGQSQPTVSIWLARLRKQLNDPLFVRTAE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECC
GMLPTPRTDALMGTVREVLAGLKRLSESGTAFDPATVQRRFSICMTDASHITLLPRLLAH
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
VRALAPGVALEASRIDTNLAHALQAGEAHLAVGFLPWLDAGFYQQTLYAQDWICLANAQH
HHHHCCCCEEEHHHHHHHHHHHHHCCCCCEEEEHHHHHCCHHHHHHHHHCCEEEEECCCC
PRVIDETRANWNLAVYQAEAHIGISSGTGYQLLDNTVASQRITRQIRLELPGFLGLSAIL
CCCHHHCCCCCEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
STSDLIATLPRHIGETLAHAAGLRVLPCPFEIPGFTVKQYWHARYHHDAACRWLRGVCAE
HHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LFMKNA
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2703465; 2848005 [H]