| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yieH [H]
Identifier: 91790326
GI number: 91790326
Start: 4748836
End: 4749489
Strand: Direct
Name: yieH [H]
Synonym: Bpro_4494
Alternate gene names: 91790326
Gene position: 4748836-4749489 (Clockwise)
Preceding gene: 91790324
Following gene: 91790340
Centisome position: 91.32
GC content: 64.98
Gene sequence:
>654_bases ATGGCAAGGGGCATCAAGGCCATTATTTTCGACTGCGATGGCACGCTGGTAGACAGTGAGACGCCGGGGCTGGATGTGCT GTATGAGGAGGCGGTCAAACTGGGCGTGGACCTGTCGCGCGAGGAGGTCCATGCCGAGTTTCGCGGCAAGCGCATGGCGC TGTGCATCGAGGCGATCGGCCGGCGCCTGGCACAGCGGCCCGCCAGCTTCGAGGCCGACTTCACCGCCCATGTGCGCCAG GCCATGGCGTTGCGCTTCAACGAAGGCCTGAACCCGATACTGGGCGCACTGGCGCTGGTGTCGCGCCTGCAGCAGCCGTT TTGCGTGGCCACCAATGGGCCGCGTGAAAAAGCAGAACTCACCTTGGGCCTGACCGGCCTGCTGCCTTACTTCGAGAACC GGATTTTTTCCGCTTACGACGTGGGTTTCTGGAAGCCTTCACCCGAGCTGTTTCTGCACGCGGCGCGAGCCTTCAGCGTC GAGCCGCGGCACTGCGCGGTGGTGGAAGACAGCCTGCCGGGCATTGAGGCGGGACTGGCGGCGGGCATGCAGGTGTATTC ACTGTGCCAGCCCGAGACAGTGCCGCCGGAACTCGCTGGCCGGATCGAGCAGATCAGCAGCCTGGCCATGCTGGACCGGG TGCTGCACGGGTAG
Upstream 100 bases:
>100_bases TGCGCGAGCGGCGCGAACCCGGTATTCAGCCCGAAGCGACCGGGTTCTCCCAGGGCGTTTGTTTACACTGGAACCATCTG AACACACCGAGAGACTGCGC
Downstream 100 bases:
>100_bases GGCTTTGGCACTCTGAGTGCATCCTCAGACTGATTACTGATTACCTGCTACAGATAACTCATAGTCTCTCCAAGCCCCTG GATCACGATCTCAACAGGGC
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MARGIKAIIFDCDGTLVDSETPGLDVLYEEAVKLGVDLSREEVHAEFRGKRMALCIEAIGRRLAQRPASFEADFTAHVRQ AMALRFNEGLNPILGALALVSRLQQPFCVATNGPREKAELTLGLTGLLPYFENRIFSAYDVGFWKPSPELFLHAARAFSV EPRHCAVVEDSLPGIEAGLAAGMQVYSLCQPETVPPELAGRIEQISSLAMLDRVLHG
Sequences:
>Translated_217_residues MARGIKAIIFDCDGTLVDSETPGLDVLYEEAVKLGVDLSREEVHAEFRGKRMALCIEAIGRRLAQRPASFEADFTAHVRQ AMALRFNEGLNPILGALALVSRLQQPFCVATNGPREKAELTLGLTGLLPYFENRIFSAYDVGFWKPSPELFLHAARAFSV EPRHCAVVEDSLPGIEAGLAAGMQVYSLCQPETVPPELAGRIEQISSLAMLDRVLHG >Mature_216_residues ARGIKAIIFDCDGTLVDSETPGLDVLYEEAVKLGVDLSREEVHAEFRGKRMALCIEAIGRRLAQRPASFEADFTAHVRQA MALRFNEGLNPILGALALVSRLQQPFCVATNGPREKAELTLGLTGLLPYFENRIFSAYDVGFWKPSPELFLHAARAFSVE PRHCAVVEDSLPGIEAGLAAGMQVYSLCQPETVPPELAGRIEQISSLAMLDRVLHG
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates phosphoenolpyruvate and AMP [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI1790151, Length=212, Percent_Identity=36.3207547169811, Blast_Score=139, Evalue=1e-34, Organism=Escherichia coli, GI87082080, Length=196, Percent_Identity=32.1428571428571, Blast_Score=64, Evalue=8e-12, Organism=Drosophila melanogaster, GI17137324, Length=218, Percent_Identity=29.8165137614679, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI20129151, Length=195, Percent_Identity=30.2564102564103, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 23736; Mature: 23604
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS00208 PLANT_GLOBIN ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARGIKAIIFDCDGTLVDSETPGLDVLYEEAVKLGVDLSREEVHAEFRGKRMALCIEAIG CCCCCEEEEEECCCEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHH RRLAQRPASFEADFTAHVRQAMALRFNEGLNPILGALALVSRLQQPFCVATNGPREKAEL HHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHEE TLGLTGLLPYFENRIFSAYDVGFWKPSPELFLHAARAFSVEPRHCAVVEDSLPGIEAGLA EECHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHH AGMQVYSLCQPETVPPELAGRIEQISSLAMLDRVLHG HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ARGIKAIIFDCDGTLVDSETPGLDVLYEEAVKLGVDLSREEVHAEFRGKRMALCIEAIG CCCCEEEEEECCCEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHH RRLAQRPASFEADFTAHVRQAMALRFNEGLNPILGALALVSRLQQPFCVATNGPREKAEL HHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHEE TLGLTGLLPYFENRIFSAYDVGFWKPSPELFLHAARAFSVEPRHCAVVEDSLPGIEAGLA EECHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHH AGMQVYSLCQPETVPPELAGRIEQISSLAMLDRVLHG HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]