Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91790301

Identifier: 91790301

GI number: 91790301

Start: 4722986

End: 4724959

Strand: Direct

Name: 91790301

Synonym: Bpro_4468

Alternate gene names: NA

Gene position: 4722986-4724959 (Clockwise)

Preceding gene: 91790300

Following gene: 91790302

Centisome position: 90.82

GC content: 66.16

Gene sequence:

>1974_bases
ATGAAAGACCTGCCCACCCTGCTCGGTGCGCTGGACCCTGAGGCCGACCTGACCGGGCGCCACGTGTGGCTGATCAGCCT
GTTCGCGTGGATCCGCGGTGACCAGACGTCCGTCGCGGCCGCGGTGGCGCGGGTTCAGGCCTTTCTGGAGGCGGTCGAGG
CCCAGCCGGAATTTCAGCGGCGCCTGCAGGCCTGGTGGCAACAACTGATACAGACCCTGGACATCACCACCTTGCTGGCG
GACTTTGGCTTTGCGCCCCGCACGGCTTTTGTCAGCGAACTCGGCGAGCGCCTGCGCCGCAAGATGCTGCCAGGCACGCC
GGAAACCTCCGACGCGTCGGAGTTGTTCCCGCTGGTGGCATCGCGGCGTTTTGATGCCCAGTGGATGGCTGCCCTGGAAG
AGCCGCAAATCGAGCGGCTGGCCCGCCTGCTCTCGGCCAACCCTCAACTGGACACACTGCACTGGCAGTACAGCCTGGTG
GACGCCCTGACCTACTGCACGGCGCAGATCCGTGCCACCGGTTTCGCGCCGGAATTGCGGCTGCGCATGGACCGGGCTAC
GCCCCACGCGCGGGCTTTTCATGCCTTGCCTTCCGACGTCGAGGAACTGCGCAGCATTTTTTTCAGACCCGAACGCGACG
AGGCGCAACTTCAGGCCGCGCTCACGCAGTACCGCGGACGGCTCGACGCCTGCCGCCAGGCGGTCAACAGCGTCTATGCG
CACATCGAGGAGAACGGCATCTCGGTCGGCATGGTGTTCCGGCTGCGCCAGCTGCGCGAGCGCATGATGCGCGTGCGGGA
ACTGCTGGACGCCCTGCTCTCGCCCAAGCCGGCCATGGCCGCGCTCAAGCTGCTGGTGCGGCGGGTGATCATCGGACACG
ACAGTAAAAGCATAGGCGCGCTGATCAGCGCCAATTCCACCTTGCTGTCCGCCAAGATGGCCGAGCGCAGCGCCGAGACC
GGCGAGCGCTACATCACGCGCAACCGCGAGGAATACCGCGAGATGCTGGGCAAGGCGATGGGCGGCGGTGCGGTCACGGC
CTTCACCACGCTGCTCAAATTCATGGTGGTGGGCATCGGACTGTCGGCTTTCTGGAGCGGCTTCTGGGCCAGCGTGGCCT
ACGCCGGCACCTTCGTCATGATCCAGCTGCTGCATTTCACGCTGGCCACCAAGCAACCGGCGATGACAGCGCCCGCCATG
GCCGCCAAGCTCAAGGACATCGGATCGGCCGAGGCCACGAATGCCGTGGAGGATTTTGTCGATGAGGTGACGCACCTGGT
GCGCTCGCAGGTAGCGGCCGTGTTCGGCAATGTGTTCATGGTCGTGCCGGCCGTGCTGCTGATCAACGCGCTGATCCTGC
TGCTGCTGGGCCATCCGATGATCAGCCACGATGAGGCCCGCCATATCCTGGCCACGCTGACCCTGCTGGGCCCGACGCTG
CTCTGGGCGGCCTTCACCGGTGTGCTGCTGTTTTCCGCCAGCATGATCGCCGGCTGGGCCGAGAACTGGTTTGTACTGCA
CCGCCTCGACTCGGCGATGCGCCACAATCCGCGCTTCACCAGCGCGCTGGGCACCGAACGGGCCGCCCGCTGGTCTGCCT
TTATGCGCGAGAACATCTCCGGCTTTGCCTCCAACATCGCGCTGGGCTTCATGCTGGGACTGATCCCGGCGTTCACCGGC
TTCTTCGGCGTCGAGCTCGAAGCACGCCACGTCACCCTGTCCACGGGGCAGCTCGCGGCAGCCGGCGCCTCGCTCGGTCT
TGAGGCCTTCAGGTTCCCGGCGATCTGGTGGTGCATGGCCGCGATTCCCCTGATTGGCGCATTGAACCTCGGCGTGAGCT
TCTACCTCGCCTTCCGCCTGGCCCTGCAGGCGCACAACGTCAGCGGTGTGGACCGCGCCCGCATCCGCGCAGCCATCTGG
GCCCGCTGGCGCACCCATCCGCGCAGCTTTTTCATGCCAGCGCAGTACCGTTGA

Upstream 100 bases:

>100_bases
CGGAAGACGGCACGCGGTTTGAGGTCGCCATCCCCATGTTTGTGCTGGAGGCACACCAGGGGGGCAATCCGGCCGGCCGC
GTCCTGCATTGAACCGGCTG

Downstream 100 bases:

>100_bases
CAGCAAACCGGCAACTACCCGCCAGCCACCCGGCGATTTCAGGTCTTGTCCTACAGGACAGGCGCCATGACACCTGTAAA
TTAGTGCAACGCATCGTTGC

Product: putative site-specific recombinase transmembrane protein

Products: NA

Alternate protein names: Site-Specific Recombinase Transmembrane Protein; Site-Specific Recombinase Gcr; Site-Specific Recombinase Prophage Insertion; Site-Specific Recombinase-Like Protein; Site-Specific Recombinase Protein Gcr; Adventurous Gliding Motility Protein AgmG; Adventurous Gliding Motility Protein

Number of amino acids: Translated: 657; Mature: 657

Protein sequence:

>657_residues
MKDLPTLLGALDPEADLTGRHVWLISLFAWIRGDQTSVAAAVARVQAFLEAVEAQPEFQRRLQAWWQQLIQTLDITTLLA
DFGFAPRTAFVSELGERLRRKMLPGTPETSDASELFPLVASRRFDAQWMAALEEPQIERLARLLSANPQLDTLHWQYSLV
DALTYCTAQIRATGFAPELRLRMDRATPHARAFHALPSDVEELRSIFFRPERDEAQLQAALTQYRGRLDACRQAVNSVYA
HIEENGISVGMVFRLRQLRERMMRVRELLDALLSPKPAMAALKLLVRRVIIGHDSKSIGALISANSTLLSAKMAERSAET
GERYITRNREEYREMLGKAMGGGAVTAFTTLLKFMVVGIGLSAFWSGFWASVAYAGTFVMIQLLHFTLATKQPAMTAPAM
AAKLKDIGSAEATNAVEDFVDEVTHLVRSQVAAVFGNVFMVVPAVLLINALILLLLGHPMISHDEARHILATLTLLGPTL
LWAAFTGVLLFSASMIAGWAENWFVLHRLDSAMRHNPRFTSALGTERAARWSAFMRENISGFASNIALGFMLGLIPAFTG
FFGVELEARHVTLSTGQLAAAGASLGLEAFRFPAIWWCMAAIPLIGALNLGVSFYLAFRLALQAHNVSGVDRARIRAAIW
ARWRTHPRSFFMPAQYR

Sequences:

>Translated_657_residues
MKDLPTLLGALDPEADLTGRHVWLISLFAWIRGDQTSVAAAVARVQAFLEAVEAQPEFQRRLQAWWQQLIQTLDITTLLA
DFGFAPRTAFVSELGERLRRKMLPGTPETSDASELFPLVASRRFDAQWMAALEEPQIERLARLLSANPQLDTLHWQYSLV
DALTYCTAQIRATGFAPELRLRMDRATPHARAFHALPSDVEELRSIFFRPERDEAQLQAALTQYRGRLDACRQAVNSVYA
HIEENGISVGMVFRLRQLRERMMRVRELLDALLSPKPAMAALKLLVRRVIIGHDSKSIGALISANSTLLSAKMAERSAET
GERYITRNREEYREMLGKAMGGGAVTAFTTLLKFMVVGIGLSAFWSGFWASVAYAGTFVMIQLLHFTLATKQPAMTAPAM
AAKLKDIGSAEATNAVEDFVDEVTHLVRSQVAAVFGNVFMVVPAVLLINALILLLLGHPMISHDEARHILATLTLLGPTL
LWAAFTGVLLFSASMIAGWAENWFVLHRLDSAMRHNPRFTSALGTERAARWSAFMRENISGFASNIALGFMLGLIPAFTG
FFGVELEARHVTLSTGQLAAAGASLGLEAFRFPAIWWCMAAIPLIGALNLGVSFYLAFRLALQAHNVSGVDRARIRAAIW
ARWRTHPRSFFMPAQYR
>Mature_657_residues
MKDLPTLLGALDPEADLTGRHVWLISLFAWIRGDQTSVAAAVARVQAFLEAVEAQPEFQRRLQAWWQQLIQTLDITTLLA
DFGFAPRTAFVSELGERLRRKMLPGTPETSDASELFPLVASRRFDAQWMAALEEPQIERLARLLSANPQLDTLHWQYSLV
DALTYCTAQIRATGFAPELRLRMDRATPHARAFHALPSDVEELRSIFFRPERDEAQLQAALTQYRGRLDACRQAVNSVYA
HIEENGISVGMVFRLRQLRERMMRVRELLDALLSPKPAMAALKLLVRRVIIGHDSKSIGALISANSTLLSAKMAERSAET
GERYITRNREEYREMLGKAMGGGAVTAFTTLLKFMVVGIGLSAFWSGFWASVAYAGTFVMIQLLHFTLATKQPAMTAPAM
AAKLKDIGSAEATNAVEDFVDEVTHLVRSQVAAVFGNVFMVVPAVLLINALILLLLGHPMISHDEARHILATLTLLGPTL
LWAAFTGVLLFSASMIAGWAENWFVLHRLDSAMRHNPRFTSALGTERAARWSAFMRENISGFASNIALGFMLGLIPAFTG
FFGVELEARHVTLSTGQLAAAGASLGLEAFRFPAIWWCMAAIPLIGALNLGVSFYLAFRLALQAHNVSGVDRARIRAAIW
ARWRTHPRSFFMPAQYR

Specific function: Unknown

COG id: COG4389

COG function: function code L; Site-specific recombinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72935; Mature: 72935

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDLPTLLGALDPEADLTGRHVWLISLFAWIRGDQTSVAAAVARVQAFLEAVEAQPEFQR
CCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHH
RLQAWWQQLIQTLDITTLLADFGFAPRTAFVSELGERLRRKMLPGTPETSDASELFPLVA
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
SRRFDAQWMAALEEPQIERLARLLSANPQLDTLHWQYSLVDALTYCTAQIRATGFAPELR
HCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LRMDRATPHARAFHALPSDVEELRSIFFRPERDEAQLQAALTQYRGRLDACRQAVNSVYA
HHHHCCCCHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HIEENGISVGMVFRLRQLRERMMRVRELLDALLSPKPAMAALKLLVRRVIIGHDSKSIGA
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHH
LISANSTLLSAKMAERSAETGERYITRNREEYREMLGKAMGGGAVTAFTTLLKFMVVGIG
HHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LSAFWSGFWASVAYAGTFVMIQLLHFTLATKQPAMTAPAMAAKLKDIGSAEATNAVEDFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH
DEVTHLVRSQVAAVFGNVFMVVPAVLLINALILLLLGHPMISHDEARHILATLTLLGPTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LWAAFTGVLLFSASMIAGWAENWFVLHRLDSAMRHNPRFTSALGTERAARWSAFMRENIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
GFASNIALGFMLGLIPAFTGFFGVELEARHVTLSTGQLAAAGASLGLEAFRFPAIWWCMA
HHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHHHHHCHHHHHHHHHHHHHH
AIPLIGALNLGVSFYLAFRLALQAHNVSGVDRARIRAAIWARWRTHPRSFFMPAQYR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKDLPTLLGALDPEADLTGRHVWLISLFAWIRGDQTSVAAAVARVQAFLEAVEAQPEFQR
CCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHH
RLQAWWQQLIQTLDITTLLADFGFAPRTAFVSELGERLRRKMLPGTPETSDASELFPLVA
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
SRRFDAQWMAALEEPQIERLARLLSANPQLDTLHWQYSLVDALTYCTAQIRATGFAPELR
HCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LRMDRATPHARAFHALPSDVEELRSIFFRPERDEAQLQAALTQYRGRLDACRQAVNSVYA
HHHHCCCCHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HIEENGISVGMVFRLRQLRERMMRVRELLDALLSPKPAMAALKLLVRRVIIGHDSKSIGA
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHH
LISANSTLLSAKMAERSAETGERYITRNREEYREMLGKAMGGGAVTAFTTLLKFMVVGIG
HHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LSAFWSGFWASVAYAGTFVMIQLLHFTLATKQPAMTAPAMAAKLKDIGSAEATNAVEDFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH
DEVTHLVRSQVAAVFGNVFMVVPAVLLINALILLLLGHPMISHDEARHILATLTLLGPTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LWAAFTGVLLFSASMIAGWAENWFVLHRLDSAMRHNPRFTSALGTERAARWSAFMRENIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
GFASNIALGFMLGLIPAFTGFFGVELEARHVTLSTGQLAAAGASLGLEAFRFPAIWWCMA
HHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHHHHHCHHHHHHHHHHHHHH
AIPLIGALNLGVSFYLAFRLALQAHNVSGVDRARIRAAIWARWRTHPRSFFMPAQYR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA