Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91790292

Identifier: 91790292

GI number: 91790292

Start: 4711895

End: 4712473

Strand: Direct

Name: 91790292

Synonym: Bpro_4459

Alternate gene names: NA

Gene position: 4711895-4712473 (Clockwise)

Preceding gene: 91790291

Following gene: 91790294

Centisome position: 90.61

GC content: 61.14

Gene sequence:

>579_bases
TTGTATAAGCAGTGCATCACCGGCCTGGCCGGGCTGGTGCTGTCACTTGGCGTGCTGGCCGCGCCGGTGGAAATTTCGGG
GGTCAAACTGGAGGACGCGCTGGACCTTCAGGGCACGAAACTCCAGCTCAATGGCGCGGGCATCCGCTACAAGGCGGTGT
TCAAGGTCTATGTGGCGGGCCTGTACCTGGGCAAGAAGGCCGCCACGCCGGAAGAGGTGTACGCGGCACCGGGCCCCAAG
CGCCTGAGCATCACGCTGCTGCGCGAGATTGATTCCAACGAGCTTGGCAAGGCATTCACCAAGGGCATTGAAGACAACAC
GCCCAAGGGCGAGATGTCCAGGCTGATCCCGGGCCTGATCAGGATGGGCCAGATCTTTGCCGACCAGAAAAAGCTGCTGC
CCGGCGAAAATTTCACCATTGACTGGATTCCCGGCACGGGCACGGTGCTCACCGTCAAGGGCAAGCAGCAGGGCGAGCCG
TTCCGGGAAATTGAATTTTTCAATGCCCTGATGCGCATCTGGCTGGGCCCGCAACCCGCAGACTGGAGGCTGAAAGAGGC
CCTGCTGAGTAAAGGCTGA

Upstream 100 bases:

>100_bases
TATAGCCGCCAGCGCGTCGCGGGCTTGAAAATAGCCCCACAAAAAAGAACGACCGTTCTATTTAACCCCGTTGGAGACTT
TCATGACTTTGCCTTTGTCT

Downstream 100 bases:

>100_bases
AAGCGATGTGCTGACCGCCTCCCGGTCGGCACACCTCTTCAGCGACCGGCTTGACGCCCGACGCTTAAATCGCGACACCC
GCGGTGCTCGCCAGGTATTT

Product: putative lipoprotein transmembrane

Products: NA

Alternate protein names: Chalcone Isomerase; Transmembrane; Chalcone Isomerase Subgroup; Lipoprotein; Exported Protein

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MYKQCITGLAGLVLSLGVLAAPVEISGVKLEDALDLQGTKLQLNGAGIRYKAVFKVYVAGLYLGKKAATPEEVYAAPGPK
RLSITLLREIDSNELGKAFTKGIEDNTPKGEMSRLIPGLIRMGQIFADQKKLLPGENFTIDWIPGTGTVLTVKGKQQGEP
FREIEFFNALMRIWLGPQPADWRLKEALLSKG

Sequences:

>Translated_192_residues
MYKQCITGLAGLVLSLGVLAAPVEISGVKLEDALDLQGTKLQLNGAGIRYKAVFKVYVAGLYLGKKAATPEEVYAAPGPK
RLSITLLREIDSNELGKAFTKGIEDNTPKGEMSRLIPGLIRMGQIFADQKKLLPGENFTIDWIPGTGTVLTVKGKQQGEP
FREIEFFNALMRIWLGPQPADWRLKEALLSKG
>Mature_192_residues
MYKQCITGLAGLVLSLGVLAAPVEISGVKLEDALDLQGTKLQLNGAGIRYKAVFKVYVAGLYLGKKAATPEEVYAAPGPK
RLSITLLREIDSNELGKAFTKGIEDNTPKGEMSRLIPGLIRMGQIFADQKKLLPGENFTIDWIPGTGTVLTVKGKQQGEP
FREIEFFNALMRIWLGPQPADWRLKEALLSKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20958; Mature: 20958

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS00962 RIBOSOMAL_S2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKQCITGLAGLVLSLGVLAAPVEISGVKLEDALDLQGTKLQLNGAGIRYKAVFKVYVAG
CHHHHHHHHHHHHHHHHHHHCCCEECCEEECCCCCCCCCEEEECCCCEEHHHHHHHHHHH
LYLGKKAATPEEVYAAPGPKRLSITLLREIDSNELGKAFTKGIEDNTPKGEMSRLIPGLI
HHHCCCCCCHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHH
RMGQIFADQKKLLPGENFTIDWIPGTGTVLTVKGKQQGEPFREIEFFNALMRIWLGPQPA
HHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCC
DWRLKEALLSKG
CHHHHHHHHCCC
>Mature Secondary Structure
MYKQCITGLAGLVLSLGVLAAPVEISGVKLEDALDLQGTKLQLNGAGIRYKAVFKVYVAG
CHHHHHHHHHHHHHHHHHHHCCCEECCEEECCCCCCCCCEEEECCCCEEHHHHHHHHHHH
LYLGKKAATPEEVYAAPGPKRLSITLLREIDSNELGKAFTKGIEDNTPKGEMSRLIPGLI
HHHCCCCCCHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHH
RMGQIFADQKKLLPGENFTIDWIPGTGTVLTVKGKQQGEPFREIEFFNALMRIWLGPQPA
HHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCC
DWRLKEALLSKG
CHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA